| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031L10 | Sequence | 503 | 003207 (4) | gb|EYU41414.1| | 3e-30 | hypothetical protein MIMGU_mgv1a002006mg [Erythranthe guttata] | 711 | 008944 (4) | gb|KCW77696.1| | 2e-79 | hypothetical protein EUGRSUZ_D01996, partial [Eucalyptus grandis] |
| JMFN019M05 | Sequence | 632 | 008944 (4) | ref|NP_192965.1| | 4e-65 | copper amine oxidase family protein [Arabidopsis thaliana] emb|CAB45975.1| coppe | |||||
| JMSF021N01 | Sequence | 677 | 008944 (4) | gb|AIE54293.1| | 5e-124 | copper-containing amine oxidase [Nicotiana tabacum] | 754 | 008944 (4) | gb|KCW77696.1| | 1e-100 | hypothetical protein EUGRSUZ_D01996, partial [Eucalyptus grandis] |
This contig is upended
. : . : . : . : . : . :
JMSF021N01- GAATGGTG
____________________________________________________________
consensus GAATGGTG
. : . : . : . : . : . :
JMSF021N01- AAATGGTGCACTCTCGCATGGTGACAAAATGGTTTTTGGTGGACAGGTTGGACTGAGTGG
____________________________________________________________
consensus AAATGGTGCACTCTCGCATGGTGACAAAATGGTTTTTGGTGGACAGGTTGGACTGAGTGG
. : . : . : . : . : . :
JMSF021N01- CATACTGATGGTGAAAGCGACGCCATATGTGAACATGAACCAAGTGAACCAGCCGGAGGA
____________________________________________________________
consensus CATACTGATGGTGAAAGCGACGCCATATGTGAACATGAACCAAGTGAACCAGCCGGAGGA
. : . : . : . : . : . :
JMSF021N01- GTATCTTTACGGCACCCTCTTGTCGGAAAACATCATCGGAGTCGTCCACGACCACTTCGT
____________________________________________________________
consensus GTATCTTTACGGCACCCTCTTGTCGGAAAACATCATCGGAGTCGTCCACGACCACTTCGT
. : . : . : . : . : . :
JMSF021N01- CACGTTCTATTTGGACATGGACATGGACGGCGCCGACAACTCCTTCGTCAAAGTGAACCT
____________________________________________________________
consensus CACGTTCTATTTGGACATGGACATGGACGGCGCCGACAACTCCTTCGTCAAAGTGAACCT
. : . : . : . : . : . :
JMSF021N01- CCAGAAGCAGCGGACGTCCCCCGGAGAGTCGCCGCGGCGGAGCTACTTGAAGGCGGTGAG
rJMSF021N01+ GTGAG
____________________________________________________________
consensus CCAGAAGCAGCGGACGTCCCCCGGAGAGTCGCCGCGGCGGAGCTACTTGAAGGCGGTGAG
. : . : . : . : . : . :
JMSF021N01- GAGCGTGGCCAAGACGGAGAAAGACGCGCAGATCAAGCTCAAGCTTTATGACCCGTCGGA
rJMSF021N01+ GAGCGTGGCCAAGACGGAGAAAGACGCGCAGATCAAGCTCAAGCTTTATGACCCGTCGGA
____________________________________________________________
consensus GAGCGTGGCCAAGACGGAGAAAGACGCGCAGATCAAGCTCAAGCTTTATGACCCGTCGGA
. : . : . : . : . : . :
JMSF021N01- GTTTCACGTGATCAACCCCAACAAGAAGACGCGCGTCGGGAACCCTGTCGGCTACAAGAT
rJMSF021N01+ GTTTCACGTGATCAACCCCAACAAGAAGACGCGCGTCGGGAACCCTGTCGGCTACAAGAT
rJMFF031L10+ ACGTGATCAACCCCAACAAGAAGACGCGCGTCGGGAACCCTGTCGGTTACAAGAT
____________________________________________________________
consensus GTTTCACGTGATCAACCCCAACAAGAAGACGCGCGTCGGGAACCCTGTCGGCTACAAGAT
. : . : . : . : . : . :
JMSF021N01- TGTCCCCGCCGGCACCGCCGCCAGCCTGCTTGACCACGACGACCCGCCGCAGATGAGAAG
rJMSF021N01+ TGTCCCCGCCGGCACCGCCGCCAGCCTGCTTGACCACGACGACCCGCCGCAGATGAGAAG
rJMFF031L10+ TGTCCCCGCCGGCACCGCCGCCAGCCTGCTTGACCACGACGACCCGCCGCAGATGAGAAG
JMFN019M05- CTTGACCACGACGACCCGCCGCAGATGAGAAG
____________________________________________________________
consensus TGTCCCCGCCGGCACCGCCGCCAGCCTGCTTGACCACGACGACCCGCCGCAGATGAGAAG
. : . : . : . : . : . :
JMSF021N01- CGCTTTTACGGATAATCAAATCTGGGTTACTCCGTATAACCGGAGCGAGCAGTGGGCAGG
rJMSF021N01+ CGCTTTTACGGATAATCAAATCTGGGTTACTCCGTATAACCGGAGCGAGCAGTGGGCAGG
rJMFF031L10+ CGCTTTTACGGATAATCAAATNTGGGTTACTCCGTATAACCGGAGCGAGCAGTGGGCAGG
JMFN019M05- CGCTTTTACGGATAATCAAATCTGGGTTACTCCGTATAACCGGAGCGAGCAGTGGGCAGG
____________________________________________________________
consensus CGCTTTTACGGATAATCAAATCTGGGTTACTCCGTATAACCGGAGCGAGCAGTGGGCAGG
. : . : . : . : . : . :
JMSF021N01- TGGGTTGTATGTCTATCAGAGCCATGGCGATGATACTCTTGCAGTTTGGTCTGAAAGAGA
rJMSF021N01+ TGGGTTGTATGTCTATCAGAGCCATGGCGATGATACTCTTGCAGTTTGGTCTGAAAGAGA
rJMFF031L10+ TGGGTTGTATGTNTATCAGAGCCATGGCGATGATACTCTTGCAGTNTGGTCTGAAAGAGA
JMFN019M05- TGGGTTGTATGTCTATCAGAGCCATGGCGATGATACTCTTGCAGTTTGGTCTGAAAGAGA
____________________________________________________________
consensus TGGGTTGTATGTCTATCAGAGCCATGGCGATGATACTCTTGCAGTTTGGTCTGAAAGAGA
. : . : . : . : . : . :
JMSF021N01- TCGGGAGATAGAGAACAAGGACATTGTGGTATGGTATACATTAGGGTTCCATCACATTCC
rJMSF021N01+ TCGGGAGATAGAGAACAAGGACATTGTGGTATGGTATACATTAGGGTTCCATCACATTCC
rJMFF031L10+ TCGGGAGATAGAGANCAAGGACATTGTGGTATGGTATACATTAGGGTTCCATCACATTCC
JMFN019M05- TCGGGAGATAGAGAACAAGGACATTGTGGTATGGTATACATTAGGGTTCCATCACATTCC
____________________________________________________________
consensus TCGGGAGATAGAGAACAAGGACATTGTGGTATGGTATACATTAGGGTTCCATCACATTCC
. : . : . : . : . : . :
JMSF021N01- ATGCCAGGA
rJMSF021N01+ ATGCCAGGAAGACTTCCCAATCATGCCGACTGTAACATCGAGCTTTGATCTAAAGCCAGT
rJMFF031L10+ ATGCCAGGAAGACTTCCCAATCATGCCGACTGTAACATCGAGCTTTGATCTAAAGCCAGT
JMFN019M05- ATGCCAGGAAGACTTCCCAATCATGCCGACTGTAACATCGAGCTTTGATCTAAAGCCAGT
____________________________________________________________
consensus ATGCCAGGAAGACTTCCCAATCATGCCGACTGTAACATCGAGCTTTGATCTAAAGCCAGT
. : . : . : . : . : . :
rJMSF021N01+ GAATTTCTTCGAGAGCAATCCAATTCTTGGAATCCCACCCAATCAGGAGAAAGATTTGCC
rJMFF031L10+ GAATTTCTTNGAGAGCAATCCAATTCTTGGAATCCCACCCAATCAGGAGAAAGATTTGCC
JMFN019M05- GAATTTCTTCGAGAGCAATCCAATTCTTGGAATCCCACCCAATCAGGAGAAAGATTTGCC
____________________________________________________________
consensus GAATTTCTTCGAGAGCAATCCAATTCTTGGAATCCCACCCAATCAGGAGAAAGATTTGCC
. : . : . : . : . : . :
rJMSF021N01+ GGTCTGCAAGGCTGCATCTTCAGCTTGATCATCTCTCTCTCTCTCTCTCTCTGCAAGACT
rJMFF031L10+ GGTCTGCAAGGCTGCATCTTCAGCTTGATCATCTCTCTCTCTCTCTCTCTCTGCAAGACT
JMFN019M05- GGTCTGCAAGGCTGCATCTTCAGCTTGATCATCTCTCTCTCTCTCTCTCTCTGCAAGACT
____________________________________________________________
consensus GGTCTGCAAGGCTGCATCTTCAGCTTGATCATCTCTCTCTCTCTCTCTCTCTGCAAGACT
. : . : . : . : . : . :
rJMSF021N01+ GCAACTTCTGCAATAGTGAAAATGCTGGACCTTCATCCGCGCTGCACTCATGAATCATCA
rJMFF031L10+ GCAACTTCTGCAATAGTGAAAATGCTGGACCTTCATCCGCGCTGCACTCATGAATCATCA
JMFN019M05- GCAACTTCTGCAATAGTGAAAATGCTGGACCTTCATCCGCGCTGCACTCATGAATCATCA
____________________________________________________________
consensus GCAACTTCTGCAATAGTGAAAATGCTGGACCTTCATCCGCGCTGCACTCATGAATCATCA
. : . : . : . : . : . :
rJMSF021N01+ TCATCATGTATATAATCTCATGTTTTTCATGAATAAAGCTTGAGAACAGATTGAAATTAC
rJMFF031L10+ TCATCATGTATATAATCTCATGTTTTTCATGAATAAAGCTTGAGAACAGATTGAAATTAC
JMFN019M05- TCATCATGTATATAATCTCATGTTTTTCATGAATAAAGCTTGAGAACAGATTCAAATTAC
____________________________________________________________
consensus TCATCATGTATATAATCTCATGTTTTTCATGAATAAAGCTTGAGAACAGATTGAAATTAC
. : . : . : . : . : . :
rJMSF021N01+ TGTTTCATCTCTGTTAAAAGTGAATTGCGAGTAGGAATCAGAATCTTCCATTGTAAAACT
rJMFF031L10+ TGTTTCATCTCTGTTAAAAGTGAATTGCGAGTAGGAATCAGAATCTTCCATNNTAAAACT
JMFN019M05- TGTTTCATCTCTGTTAAAAGTGAATTGCGAGTAGGAATCAAAATCTTCCATTGTAAAACT
____________________________________________________________
consensus TGTTTCATCTCTGTTAAAAGTGAATTGCGAGTAGGAATCAGAATCTTCCATTGTAAAACT
. : . : . : . : . : . :
rJMSF021N01+ GTTTTCATGGCAGTACATATATACTG
rJMFF031L10+ GTTTTCATGGCAGTACATATATACTGCTGTATATCAATGGAGAATGG
JMFN019M05- GTTTTCATGGCAGTACATATATACTGCTGTATATCAATGGAGAATGGTGATGTCATGATT
____________________________________________________________
consensus GTTTTCATGGCAGTACATATATACTGCTGTATATCAATGGAGAATGGTGATGTCATGATT