Contig 008938:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN043K24-                                            TTTGTATGATAATGATAATAGGTGTGG
                      ____________________________________________________________
consensus                                              TTTGTATGATAATGATAATAGGTGTGG
 
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JMFN043K24-           TGGCGTGCAGCCTGGTAGGTGTGGCATTAGCCGTGCCCCCGCCCCCGCTTAACTTCAACA
                      ____________________________________________________________
consensus             TGGCGTGCAGCCTGGTAGGTGTGGCATTAGCCGTGCCCCCGCCCCCGCTTAACTTCAACA
 
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JMFN043K24-           ATGATGTCCAAATGTATTTTGGGAATCATCTTGGGCAAGTGCAAGACAACGGCAACACGA
                      ____________________________________________________________
consensus             ATGATGTCCAAATGTATTTTGGGAATCATCTTGGGCAAGTGCAAGACAACGGCAACACGA
 
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JMFN043K24-           TGGCCCTGAATCTTGACCAACAAACTGGTTTTGGTTTCAATACCAAAAATGAGTACCTGT
                      ____________________________________________________________
consensus             TGGCCCTGAATCTTGACCAACAAACTGGTTTTGGTTTCAATACCAAAAATGAGTACCTGT
 
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JMFN043K24-           TCGGCAGATTCGACATGCAAATGAAGTTAGTGAAAGGCTTCTCGGCTGGCACTGTCACCA
                      ____________________________________________________________
consensus             TCGGCAGATTCGACATGCAAATGAAGTTAGTGAAAGGCTTCTCGGCTGGCACTGTCACCA
 
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JMFN043K24-           CCTTCTATCTAACATCACCTATAGGACAAGCGCACGATGAAGTGGACTTTGAATTCTTAG
rJMFF004L17+                                AGGACAAGCGCACGATGAAGTGGACTTTGAATTCTTAG
                      ____________________________________________________________
consensus             CCTTCTATCTAACATCACCTATAGGACAAGCGCACGATGAAGTGGACTTTGAATTCTTAG
 
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JMFN043K24-           GGAATGCTACTTTTCAGCCTTACACAGTCCATACCAATGTATTTGCTGATGGGAAAGGTG
rJMFF018B14+                                 ACAGTCCATACCAATGTATTTGCTGATGGGAAAGGTG
rJMFF004L17+          GGAATGCTACTTTTCAGCCTTACACAGTCCATACCAATGTATTTGCTGATGGGAAAGGTG
                      ____________________________________________________________
consensus             GGAATGCTACTTTTCAGCCTTACACAGTCCATACCAATGTATTTGCTGATGGGAAAGGTG
 
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JMFN043K24-           ACAGGGAGCAACAGTTCCATCTCTGGTTTGACCCAACAGCCGCATATCACGATTACACTA
rJMFF018B14+          ACAGGGAGCAACAGTTCCATCTCTGGTTTGACCCAACAGCCGCATATCACGATTACACTA
rJMFF004L17+          ACAGGGAGCAACAGTTCCATCTCTGGTTCGACCCAACAGCCGCATATCACGATTACACTA
                      ____________________________________________________________
consensus             ACAGGGAGCAACAGTTCCATCTCTGGTTTGACCCAACAGCCGCATATCACGATTACACTA
 
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JMFN043K24-           TTATCTGGAACTCACAAAGAATTGTTTGGTTGGTGGATAACGTTCCGATTAGAGTATACG
rJMFF018B14+          TTATCTGGAACTCACAAAGAATTGTTTGGTTGGTGGATAACGTTCCGATTAGAGTATACG
rJMFF004L17+          TTATCTGGAACTCACAAAGAATTGTTTGGTTGGTGGATAACGTTCCGATTAGAGTATACG
JMFN016J16-                               ATTGTTTGGTTGGTGGATAACGTTCCGATTAGAGTATACG
                      ____________________________________________________________
consensus             TTATCTGGAACTCACAAAGAATTGTTTGGTTGGTGGATAACGTTCCGATTAGAGTATACG
 
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JMFN043K24-           AGAATCACGAAAATGTTGGGGTTCCATTCCCAAAGAGCAAGCCCATGAAAGTATTCTGCA
rJMFF018B14+          AGAATCACGAAAATGTTGGGGTTCCATTCCCAAAGAGCAAGCCCATGAAAGTATTCTGCA
rJMFF004L17+          AGAATCACGAAAATGTTGGGGTTCCATTCCCAAAGAGCAAGCCCATGAAAGTATTCTGCA
JMFN016J16-           AGAATCACGAAAATGTTGGGGTTCCATTCCCAAAGAGCAAGCCCATGAAAGTATTCTGCA
                      ____________________________________________________________
consensus             AGAATCACGAAAATGTTGGGGTTCCATTCCCAAAGAGCAAGCCCATGAAAGTATTCTGCA
 
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JMFN043K24-           GCTTGTGGGAAGCGTCTGATTGGGCAACC                               
rJMFF018B14+          GCTTGTGGGAAGCGTCTGATTGGGCAACCCAGGGAGGAGATGTGAAGGTAGATTGGTCAA
rJMFF004L17+          GCTTGTGGGAAGCGTCTGATTGGGCAACCCAGGGAGGAGATGTGAAGGTAGATTGGTCAA
JMFN016J16-           GCTTGTGGGAAGCGTCTGATTGGGCAACCCAGGGAGGAGATGTGAAGGTAGATTGGTCAA
                      ____________________________________________________________
consensus             GCTTGTGGGAAGCGTCTGATTGGGCAACCCAGGGAGGAGATGTGAAGGTAGATTGGTCAA
 
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rJMFF018B14+          AAGCTCCCTTCACTGCCTACTACAAAAACTTTGTTATCGACGGTTGTGTCGGAACTTCCT
rJMFF004L17+          AAGCTCCCTTCACTGCCTACTACAAAAACTTTGTTATCGACGGTTGTGTCGGAACTTCCT
JMFN016J16-           AAGCTCCCTTCACTGCCTACTACAAAAACTTTGTTATCGACGGTTGTGTCGGAACTTCCT
                      ____________________________________________________________
consensus             AAGCTCCCTTCACTGCCTACTACAAAAACTTTGTTATCGACGGTTGTGTCGGAACTTCCT
 
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rJMFF018B14+          CCTGCGCCGATAGTAAGCCATGGGGAAAGTATGCGCTTGATGCCGATGCCAATAATAAAC
rJMFF004L17+          CCTGCGCCGATAGTAAGCCATGGGGAAAGTATGCGCTTGATGCCGATGCCAATAATAAAC
JMFN016J16-           CCTGCGCCGATAGTAAGCCATGGGGAAAGTATGCGCTTGATGCCGATGCCAATAATAAAC
                      ____________________________________________________________
consensus             CCTGCGCCGATAGTAAGCCATGGGGAAAGTATGCGCTTGATGCCGATGCCAATAATAAAC
 
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rJMFF018B14+          TCCAAGGCGTACGAACAAAGAATAGGGTCTACAATTACTGCACTGATAACAAGCGTTTCG
rJMFF004L17+          TCCAAGGCGTACGAACAAAGAATAGGGTCTACAATTACTGCACTGATAACAAGCGTTTCG
JMFN016J16-           TCCAAGGCGTACGAACAAAGAATAGGGTCTACAATTACTGCACTGATAACAAGCGTTTCG
                      ____________________________________________________________
consensus             TCCAAGGCGTACGAACAAAGAATAGGGTCTACAATTACTGCACTGATAACAAGCGTTTCG
 
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rJMFF018B14+          GGGGCAACCCTCCTGCTGAATGCAAACCCGCAGGCCCACAGCCTAAATAATTTAAGTTGC
rJMFF004L17+          GGGGCAACCCTCCTGCTGAATGCAAACCCGCAGGCCCACAGCCTAAATAATTTAAGTTGC
JMFN016J16-           GGGGCAACCCTCCTGCTGAATGCAAACCCGCAGGCCCACAGCCTAAATAATTTAAGTTGC
                      ____________________________________________________________
consensus             GGGGCAACCCTCCTGCTGAATGCAAACCCGCAGGCCCACAGCCTAAATAATTTAAGTTGC
 
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rJMFF018B14+          CGCCCGGCCACTCGCGTGCGTCGTTACAGATCGATCAATAATAATGCATGAGATTCAATT
rJMFF004L17+          CGCCCGGCCACTCGCGTGCGTCGTTACAGATCGATCAATAATAATGCATGAGATTCAATT
JMFN016J16-           CGCCCGGCCACTCGCGTGCGTCGTTACAGATCGATCAATAATAATGCATGAGATTCAATT
                      ____________________________________________________________
consensus             CGCCCGGCCACTCGCGTGCGTCGTTACAGATCGATCAATAATAATGCATGAGATTCAATT
 
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rJMFF018B14+          CATTATTATTTCTCATTTTGTAGATAGGTTATTATTATCTAGCTAAGCTAGATTGTATGT
rJMFF004L17+          CATTATTATTTCTCATTTTGTAGATAGGTTATTATTATCTAGCTAAGCTAGATTGTATGT
JMFN016J16-           CATTATTATTTCTCATTTTGTAGATAGGTTATTATTATCTAGCTAAGCTAGATTGTATGT
                      ____________________________________________________________
consensus             CATTATTATTTCTCATTTTGTAGATAGGTTATTATTATCTAGCTAAGCTAGATTGTATGT
 
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rJMFF018B14+          AATCCACTCATATATATGTAATGTATATATGGAT                          
rJMFF004L17+          AATCCACTCATATATATGTAATGTATATATGGAT                          
JMFN016J16-           AATCCACTCATATATATGTAATGTATATATGGATTGCAATTAATAAACATTATTTATTTC
                      ____________________________________________________________
consensus             AATCCACTCATATATATGTAATGTATATATGGATTGCAATTAATAAACATTATTTATTTC