Contig 008937:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN016F11Sequence595008937 (2)emb|CDP09864.1|2e-12unnamed protein product [Coffea canephora]
JMFS092E11Sequence642008937 (2)ref|XP_007040017.1|2e-51Multidrug and toxin extrusion protein 1 [Theobroma cacao] gb|EOY24518.1| Multidr

Alignment

This contig is upended


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JMFS092E11+               AATCGAAACATCGTGTTCTTGTCCGAAGTGGAGAAGAATCTTGTCGACATTGAGCC
                      ____________________________________________________________
consensus                 AATCGAAACATCGTGTTCTTGTCCGAAGTGGAGAAGAATCTTGTCGACATTGAGCC
 
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JMFS092E11+           ACAGGAGAGCGATGGGGAGGGAGATAAAGAGGAGCAAAGTGGCCGCCATGAGAAGCGTCT
                      ____________________________________________________________
consensus             ACAGGAGAGCGATGGGGAGGGAGATAAAGAGGAGCAAAGTGGCCGCCATGAGAAGCGTCT
 
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JMFS092E11+           TGTGGAGGAGGCGGAAATTCTTGGCGCCAAACGCCTGGCCGCAAATCGGCTCCACGGCGT
                      ____________________________________________________________
consensus             TGTGGAGGAGGCGGAAATTCTTGGCGCCAAACGCCTGGCCGCAAATCGGCTCCACGGCGT
 
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JMFS092E11+           AGGAGAGGCCGTTGAGGACGGAAAATCCGGTGACATTTGCGAAGGTGAAGCCGAGGGTGG
                      ____________________________________________________________
consensus             AGGAGAGGCCGTTGAGGACGGAAAATCCGGTGACATTTGCGAAGGTGAAGCCGAGGGTGG
 
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JMFS092E11+           CGCCGCTCAGGGAAAGCTCTCCGAGACGGCCGAGAAACGCCGTCGTGATGGTTAGCTTGG
JMFN016F11+                CTCAAGGAAAGCTCTCCCAGACGGCCGAGAAACACCGTCGTGATGGTTATCTTGG
                      ____________________________________________________________
consensus             CGCCGCTCAGGGAAAGCTCTCCGAGACGGCCGAGAAACGCCGTCGTGATGGTTATCTTGG
 
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JMFS092E11+           CGAACCACGTGAAGTTCATGAGCAGCAACGGCAGCAGTATCGGGCGCTGCACTTTCAGCT
JMFN016F11+           CGAACCACGTGATGTTCATGAGCAGCAACGGCAGCAGTATGGGGCGCTGCACTTTCAGCT
                      ____________________________________________________________
consensus             CGAACCACGTGATGTTCATGAGCAGCAACGGCAGCAGTATGGGGCGCTGCACTTTCAGCT
 
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JMFS092E11+           CCGACAGCGTGGATTTCACCAAACTTTCCGACCATGTTTTCGGCGAGGATAAGGTTGTTG
JMFN016F11+           CCGACAGCGTGGGTTTCACCAAACTTTCCGACCATGTTTTCGGCGAGGATAAGGTTGTTG
                      ____________________________________________________________
consensus             CCGACAGCGTGGGTTTCACCAAACTTTCCGACCATGTTTTCGGCGAGGATAAGGTTGTTG
 
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JMFS092E11+           GCGA                                                        
JMFN016F11+           GCGAAACGGGACGATCCTCTTCCAATCTCGAAGCAATATTCATTATTGCGTTTTGCTGCA
                      ____________________________________________________________
consensus             GCGAAACGGGACGATCCTCTTCCAATCTCGAAGCAATATTCATTATTGCGTTTTGCTGCA
 
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JMFN016F11+           ACTAAATTGTAATGCCGTTTGGTACTAAATTAAAGGAGACAAAACGAGGAATTACAGATG
                      ____________________________________________________________
consensus             ACTAAATTGTAATGCCGTTTGGTACTAAATTAAAGGAGACAAAACGAGGAATTACAGATG
 
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JMFN016F11+           ATTTTTTTTTTTTTTTGGTATATCCATGGTTTTCACCGTCACACAGTAACTAATGGCTTA
                      ____________________________________________________________
consensus             ATTTTTTTTTTTTTTTGGTATATCCATGGTTTTCACCGTCACACAGTAACTAATGGCTTA
 
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JMFN016F11+           AATTGTAAGTCACTTTTTTGAGTGAGACAGTTGACCTGAAGATTTAAGGTTACTTCATTT
                      ____________________________________________________________
consensus             AATTGTAAGTCACTTTTTTGAGTGAGACAGTTGACCTGAAGATTTAAGGTTACTTCATTT
 
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JMFN016F11+           CTAAAATCAAGGATAAAAAATCTTTGACCAAATGATGAGTCCCTTTCACTCAACCACACC
                      ____________________________________________________________
consensus             CTAAAATCAAGGATAAAAAATCTTTGACCAAATGATGAGTCCCTTTCACTCAACCACACC
 
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JMFN016F11+           CTCCAAGTTAAGAATTACAGATGATGTTGGGGTATGTAGTGCGCATGAATTTCGTGAAGG
                      ____________________________________________________________
consensus             CTCCAAGTTAAGAATTACAGATGATGTTGGGGTATGTAGTGCGCATGAATTTCGTGAAGG
 
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JMFN016F11+           TAAAAGGTTTTCTTACGAGGAGTATTACACAGAAAGAGTGGCGTCTTTGTAACGGCCAAT
                      ____________________________________________________________
consensus             TAAAAGGTTTTCTTACGAGGAGTATTACACAGAAAGAGTGGCGTCTTTGTAACGGCCAAT