Contig 008932:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN013K19Sequence627008932 (6)ref|XP_011088318.1|109PREDICTED: uncharacterized protein LOC105169591 [Sesamum indicum]
JMFN016B04Sequence551008932 (6)ref|XP_011088318.1|109PREDICTED: uncharacterized protein LOC105169591 [Sesamum indicum]
JMFN020D21Sequence580008932 (6)ref|XP_011088318.1|109PREDICTED: uncharacterized protein LOC105169591 [Sesamum indicum]
JMSF013F19Sequence235008932 (6)gb|ABK96760.1|3e-06unknown [Populus trichocarpa x Populus deltoides]757009201 (6)
JMSF044N22Sequence237008932 (6)178008932 (6)

Alignment

This contig is upended


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JMSF044N22+                      TTTTACTATTTTGATGATATATATAATAATATGTGAGAAAAACAAATGA
JMFN016B04+                      TTTTACTATTTTGATGATATATATAATAATATGTGAGAAAAACAAATGA
JMFN020D21+            AATGAGCAGGTTTTACTATTTTGATGATATATATAATAATATGTGAGAAAAACAAATGA
JMFN013K19+                                            ATAATAATATGTGAGAAAAACAAATGA
                      ____________________________________________________________
consensus              AATGAGCAGGTTTTACTATTTTGATGATATATATAATAATATGTGAGAAAAACAAATGA
 
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rJMSF044N22-              AAATCAAATCTGTCACAATAAGCATAGATATGTATATATGGAATGAATGGAGAAGC
JMSF044N22+           AATCAAATCAAATCTGTCACAATAAGCATAGATATGTATATATGGAATGAATGGAGAAGC
JMFN016B04+           AATCAAATCAAATCTGTCACAATAAGCATAGATATGTATATATGGAATGAATGGAGAAGC
JMFN020D21+           AATCAAATCAAATCTGTCACAATAAGCATAGATATGTATATATGGAATGAATGGAGAAGC
JMFN013K19+           AATCAAATCAAATCTGTCACAATAAGCATAGATATGTATATATGGAATGAATGGAGAAGC
                      ____________________________________________________________
consensus             AATCAAATCAAATCTGTCACAATAAGCATAGATATGTATATATGGAATGAATGGAGAAGC
 
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rJMSF044N22-          AGAGCTAATCTTGATTAGCAGTGAAGCATCTGATCTCTCTCAGATCACTCAGCTTCCTCG
JMSF044N22+           AGAGCTAATCTTGATTAGCAGTGAAGCATCTGATCTCTCTCAGATCACTCAGCTTCCTCG
JMFN016B04+           AGAGCTAATCTTGATTAGCAGTGAAGCATCTGATCTCTCTCAGATCACTCAGCTTCCTCG
JMFN020D21+           AGAGCTAATCTTGATTAGCAGTGAAGCATCTGATCTCTCTCAGATCACTCAGCTTCCTCG
JMFN013K19+           AGAGCTAATCTTGATTAGCAGTGAAGCATCTGATCTCTCTCAGATCACTCAGCTTCCTCG
                      ____________________________________________________________
consensus             AGAGCTAATCTTGATTAGCAGTGAAGCATCTGATCTCTCTCAGATCACTCAGCTTCCTCG
 
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rJMSF044N22-          ACAGTAGCTTCGAGGCGGAGGAGGACGAAGCCGACGGCAACCCCAACGAGAACAAGCCCC
JMSF044N22+           ACAGTAGCTTCGAGGCGGAGGAGGACGAAGCCGACGGCAACCCCAACGAGAACAAGCCCC
JMFN016B04+           ACAGTAGCTTCGAGGCGGAGGAGGACGAAGCCGACGGCAACCCCAACGAGAACAAGCCCC
JMFN020D21+           ACAGTAGCTTCGAGGCGGAGGAGGACGAAGCCGACGGCAACCCCAACGAGAACAAGCCCC
JMFN013K19+           ACAGTAGCTTCGAGGCGGAGGAGGACGAAGCCGACGGCAACCCCAACGAGAACAAGCCCC
                      ____________________________________________________________
consensus             ACAGTAGCTTCGAGGCGGAGGAGGACGAAGCCGACGGCAACCCCAACGAGAACAAGCCCC
 
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rJMSF044N22-          GG                                                          
JMSF044N22+           GG                                                          
JMFN016B04+           GGGAGGATGGCCGCAATCTTGAAAATCTCAGCCACGGCATTGCAGGTAGAAGAGAGAGCT
JMFN020D21+           GGGAGGATGGCCGCAATCTTGAAAATCTCAGCCACGGCATTGCAGGTAGAAGAGAGAGCT
JMFN013K19+           GGGAGGATGGCCGCAATCTTGAAAATCTCAGCCACGGCATTGCAGGTAGAAGAGAGAGCT
                      ____________________________________________________________
consensus             GGGAGGATGGCCGCAATCTTGAAAATCTCAGCCACGGCATTGCAGGTAGAAGAGAGAGCT
 
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JMFN016B04+           CCGCCGCCGCCGCCGCCGCCTCTCCCTCTGCCCCGTGATGGGTCTCTCAGTGAGCTCACA
JMFN020D21+           CCGCCGCCGCCGCCGCCGCCTCTCCCTCTGCCCCGTGATGGGTCTCTCAGTGAGCTCACA
JMFN013K19+           CCGCCGCCGCCGCCGCCGCCTCTCCCTCTGCCCCGTGATGGGTCTCTCAGTGAGCTCACA
                      ____________________________________________________________
consensus             CCGCCGCCGCCGCCGCCGCCTCTCCCTCTGCCCCGTGATGGGTCTCTCAGTGAGCTCACA
 
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JMFN016B04+           ATCTTTGCAAATGAGTGGTCAGTGCAAACAGGGAGGCCCAGAGTGGATACATGGTTATGC
JMFN020D21+           ATCTTTGCAAATGAGTGGTCAGTGCAAACAGGGAGGCCCAGAGTGGATACATGGTTATGC
JMSF013F19+                                              GCCCAGAGTGGATACATGGTTATGC
JMFN013K19+           ATCTTTGCAAATGAGTGGTCAGTGCAAACAGGGAGGCCCAGAGTGGATACATGGTTATGC
                      ____________________________________________________________
consensus             ATCTTTGCAAATGAGTGGTCAGTGCAAACAGGGAGGCCCAGAGTGGATACATGGTTATGC
 
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JMFN016B04+           GCCTTCAGCCCTCCGAACGAGTTCAACCCACTAATGTAATTCACTTTCGTCGCCCTTTTC
JMFN020D21+           GCCTTCAGCCCTCCGAACGAGTTCAACCCACTAATGTAATTCACTTTCGTCGCCCTTTTC
JMSF013F19+           GCCTTCAGCCCTCCGAACGAGTTCAACCCACTAATGTAATTCACTTTCGTCGCCCTTTTC
JMFN013K19+           GCCTTCAGCCCTCCGAACGAGTTCAACCCACTAATGTAATTCACTTTCGTCGCCCTTTTC
                      ____________________________________________________________
consensus             GCCTTCAGCCCTCCGAACGAGTTCAACCCACTAATGTAATTCACTTTCGTCGCCCTTTTC
 
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JMFN016B04+           TGGGAAGGCCTGATGGCCGTGCCGGTAACTGCACTCGCCGGAGAAAATGTAGCCGATGCA
JMFN020D21+           TGGGAAGGCCTGATGGCCGTGCCGGTAACTGCACTCGCCGGAGAAAATGTAGCCGATGCA
JMSF013F19+           TGGGAAGGCCTGATGGCCGTGCCGGTAACTGCACTCGCCGGAGAAAATGTAGCCGATGCA
JMFN013K19+           TGGGAAGGCCTGATGGCCGTGCCGGTAACTGCACTCGCCGGAGAAAATGTAGCCGATGCA
                      ____________________________________________________________
consensus             TGGGAAGGCCTGATGGCCGTGCCGGTAACTGCACTCGCCGGAGAAAATGTAGCCGATGCA
 
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JMFN016B04+           GATGCAGTTGCCA                                               
JMFN020D21+           GATGCAGTTGCCATGGCCTTCTTTACCTGATCGAACAAGTT                   
JMSF013F19+           GATGCAGTTGCCATGGCCTTCTTTACCTGATCGAACAAGTTAGAAGATGAGTATAGAAGT
JMFN013K19+           GATGCAGTTGCCATGGCCTTCTTTACCTGATCGAACAAGTTAGAAGATGAGTATAGAAGT
                      ____________________________________________________________
consensus             GATGCAGTTGCCATGGCCTTCTTTACCTGATCGAACAAGTTAGAAGATGAGTATAGAAGT
 
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JMSF013F19+           GATAAAAACGGAAAAGAAAAGGTGTGAT                                
JMFN013K19+           GATAAAAACGGAAAAGAAAAGGTGTGATTGGGAGGAAATGGGTGTGAGGAGAATATTAGA
                      ____________________________________________________________
consensus             GATAAAAACGGAAAAGAAAAGGTGTGATTGGGAGGAAATGGGTGTGAGGAGAATATTAGA