| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN012I03 | Sequence | 610 | 008929 (8) | ref|XP_009612160.1| | 155 | PREDICTED: uncharacterized protein LOC104105529 [Nicotiana tomentosiformis] | |||||
| JMFN029G06 | Sequence | 622 | 008929 (8) | ref|XP_011074276.1| | 143 | PREDICTED: uncharacterized protein LOC105159041 [Sesamum indicum] | |||||
| JMSF002L13 | Sequence | 364 | 008929 (8) | emb|CDP00933.1| | 3e-18 | unnamed protein product [Coffea canephora] | 752 | 008929 (8) | ref|XP_009612160.1| | 137 | PREDICTED: uncharacterized protein LOC104105529 [Nicotiana tomentosiformis] |
| JMSF026A06 | Sequence | 638 | 008929 (8) | ref|XP_009612160.1| | 184 | PREDICTED: uncharacterized protein LOC104105529 [Nicotiana tomentosiformis] | 761 | 008929 (8) | ref|XP_009612160.1| | 177 | PREDICTED: uncharacterized protein LOC104105529 [Nicotiana tomentosiformis] |
| JMSF027A06 | Sequence | 616 | 008929 (8) | ref|XP_009612160.1| | 173 | PREDICTED: uncharacterized protein LOC104105529 [Nicotiana tomentosiformis] | 773 | 008929 (8) | ref|XP_011074276.1| | 181 | PREDICTED: uncharacterized protein LOC105159041 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF002L13- ATTTGAACATCCACATACACGAAAAATCAAGCTTATGAATATATTACAG
____________________________________________________________
consensus ATTTGAACATCCACATACACGAAAAATCAAGCTTATGAATATATTACAG
. : . : . : . : . : . :
rJMSF002L13- ATTAAGGAATTTAGGACGTGAACAAGAATTTGATTAAGGAATACAGGGATTACTTTTACA
____________________________________________________________
consensus ATTAAGGAATTTAGGACGTGAACAAGAATTTGATTAAGGAATACAGGGATTACTTTTACA
. : . : . : . : . : . :
rJMSF002L13- AATAGTAGTCTTTTGCAAGTATCAAACAGCATTATTGTTGAATTTCATCTAGAGTGAAAT
JMFN029G06+ AAAT
rJMSF026A06- AGTATCAAACAGCATTATTGTTGAATTTCATCTAGAGTGAAAT
rJMSF027A06- AGTATCAAACAGCATTATTGTTGAATTTCATCTAGAGTGAAAT
____________________________________________________________
consensus AATAGTAGTCTTTTGCAAGTATCAAACAGCATTATTGTTGAATTTCATCTAGAGTGAAAT
. : . : . : . : . : . :
rJMSF002L13- CCAATTAGCATTAGAAGGTACAAGCACAGGTTGTATAAAAAGTTATCCCTGAGGATGGGA
JMFN029G06+ CCAATTAGCATTAGAAGGTACAAGCACAGGTTGTATAAAAAGTTATCCCTGAGGATGGGA
rJMSF026A06- CCAATTAGCATTAGAAGGTACAAGCACAGGTTGTATAAAAAGTTATCCCTGAGGATGGGA
rJMSF027A06- CCAATTAGCATTAGAAGGTACAAGCACAGGTTGTATAAAAAGTTATCCCTGAGGATGGGA
____________________________________________________________
consensus CCAATTAGCATTAGAAGGTACAAGCACAGGTTGTATAAAAAGTTATCCCTGAGGATGGGA
. : . : . : . : . : . :
rJMSF002L13- GAAAAAGGAAAGGAAAGGAAAGGAAAGGAGATGATACATTTTGGCAATGACTAAGAAGTC
JMFN029G06+ GAAAAAGGAAAGGAAAGGAAAGGAAAGGAGATGATACATTTTGGCAATGACTAAGAAGTC
rJMSF026A06- GAAAAAGGAAAGGAAAGGAAAGGAAAGGAGATGATACATTTTGGCAATGACTAAGAAGTC
rJMSF027A06- GAAAAAGGAAAGGAAAGGAAAGGAAAGGAGATGATACATTTTGGCAATGACTAAGAAGTC
____________________________________________________________
consensus GAAAAAGGAAAGGAAAGGAAAGGAAAGGAGATGATACATTTTGGCAATGACTAAGAAGTC
. : . : . : . : . : . :
rJMSF002L13- AAACGAGCAAGAGCATCCTGGGCGGCGGAGTAGTCTGGCTGGATTTTAAGAGCGTCTTCG
JMFN029G06+ AAACGAGCAAGAGCATCCTGGGCGGCGGAGTAGTCTGGCTGGATTTTAAGAGCGTCTTCG
rJMSF026A06- AAACGAGCAAGAGCATCCTGGGCGGCGGAGTAGTCTGGCTGGATTTTAAGAGCGTCTTCG
rJMSF027A06- AAACGAGCAAGAGCATCCTGGGCGGCGGAGTAGTCTGGCTGGATTTTAAGAGCGTCTTCG
JMSF026A06+ TTCG
____________________________________________________________
consensus AAACGAGCAAGAGCATCCTGGGCGGCGGAGTAGTCTGGCTGGATTTTAAGAGCGTCTTCG
. : . : . : . : . : . :
rJMSF002L13- TAAGACTTTCGGGCCTCCTCGCTCAGCTCTTTCTTTTCATAGCACTCTCCTAACAGACAA
JMFN029G06+ TAAGACTTTCGGGCCTCCTCGCTCAGCTCTTTCTTTTCATAGCACTCTCCTAACAGACAA
rJMSF026A06- TAAGACTTTCGGGCCTCCTCGCTCAGCTCTTTCTTTTCATAGCACTCTCCTAACAGACAA
rJMSF027A06- TAAGACTTTCGGGCCTCCTCGCTCAGCTCTTTCTTTTCATAGCACTCTCCTAACAGACAA
JMSF026A06+ TAAGACTTTCGGGCCTCCTCGCTCAGCTCTTTCTTTTCATAGCACTCTCCTAACAGACAA
JMSF027A06+ TCGCTCAGCTCTTTCTTTTCATAGCACTCTCCTAACAGACAA
JMFN012I03+ TAACAGACAA
____________________________________________________________
consensus TAAGACTTTCGGGCCTCCTCGCTCAGCTCTTTCTTTTCATAGCACTCTCCTAACAGACAA
. : . : . : . : . : . :
rJMSF002L13- AGCCCCTTGACATTATCGCCCTTCAACCGCACCGACTCGATCAGATCCTCAACGGCCGAG
JMFN029G06+ AGCCCCTTGACATTATCGCCCTTCAACCGCACCGACTCGATCAGATCCTCAACGGCCGAG
rJMSF026A06- AGCCCCTTGACATTATCGCCCTTCAACCGCACCGACTCGATCAGATCCTCAACGGCCGAG
rJMSF027A06- AGCCCCTTGACATTATCGCCCTTCAACCGCACCGACTCGATCAGATCCTCAACGGCCGAG
JMSF026A06+ AGCCCCTTGACATTATCGCCCTTCAACCGCACCGACTCGATCAGATCCTCAACGGCCGAG
JMSF027A06+ AGCCCCTTGACATTATCGCCCTTCAACCGCACCGACTCGATCAGATCCTCAACGGCCGAG
JMFN012I03+ AGCCCCTTGACATTATCGCCCTTCAACCGCACCGACTCGATCAGATCCTCAACGGCCGAG
____________________________________________________________
consensus AGCCCCTTGACATTATCGCCCTTCAACCGCACCGACTCGATCAGATCCTCAACGGCCGAG
. : . : . : . : . : . :
rJMSF002L13- TCAATTTGCTCGCCCTTACTCACCGCGAGCTTCAATTCCGCCCGTTTGTGCAGCGCTTCC
JMFN029G06+ TCAATTTGCTCGCCCTTACTCACCGCGAGCTTCAATTCCGCCCGTTTGTGCAGCGCTTCC
rJMSF026A06- TCAATTTGCTCGCCCTTACTCACCGCGAGCTTCAATTCCGCCCGTTTGTGCAGCGCTTCC
rJMSF027A06- TCAATTTGCTCGCCCTTACTCACCGCGAGCTTCAATTCCGCCCGTTTGTGCAGCGCTTCC
JMSF026A06+ TCAATTTGCTCGCCCTTACTCACCGCGAGCTTCAATTCCGCCCGTTTGTGCAGCGCTTCC
JMSF027A06+ TCAATTTGCTCGCCCTTACTCACCGCGAGCTTCAATTCCGCCCGTTTGTGCAGCGCTTCC
JMFN012I03+ TCAATTTGCTCGCCCTTACTCACCGCGAGCTTCAATTCCGCCCGTTTGTGCAGCGCTTCC
____________________________________________________________
consensus TCAATTTGCTCGCCCTTACTCACCGCGAGCTTCAATTCCGCCCGTTTGTGCAGCGCTTCC
. : . : . : . : . : . :
rJMSF002L13- GCCCTCTCGGGGAGGCTGAGCGACTTCGCCGCCAGCGGCGACAGCGCGACGTTCATCGCG
JMFN029G06+ GCCCTCTCGGGGAGGCTGAGCGACTTCGCCGCCAGCGGCGACAGCGCGACGTTCATCGCG
rJMSF026A06- GCCCTCTCGGGGAGGCTGAGCGACTTCGCCGCCAGCGGCGACAGCGCGACGTTCATCGCG
rJMSF027A06- GCCCTCTCGGGGAGGCTGAGCGACTTCGCCGCCAGCGGCGACAGCGCGACGTTCATCGCG
JMSF026A06+ GCCCTCTCGGGGAGGCTGAGCGACTTCGCCGCCAGCGGCGACAGCGCGACGTTCATCGCG
JMSF027A06+ GCCCTCTCGGGGAGGCTGAGCGACTTCGCCGCCAGCGGCGACAGCGCGACGTTCATCGCG
JMFN012I03+ GCCCTCTCGGGGAGGCTGAGCGACTTCGCCGCCAGCGGCGACAGCGCGACGTTCATCGCG
____________________________________________________________
consensus GCCCTCTCGGGGAGGCTGAGCGACTTCGCCGCCAGCGGCGACAGCGCGACGTTCATCGCG
. : . : . : . : . : . :
rJMSF002L13- TCGAGAGCTGAGGTCTTGAACCCCTGCACCTCCAGAGCCATAGCCTTGAGCAAATGAAGA
JMFN029G06+ TCGAGAGCTGAGGTCTTGAACCCCTGCACCTCCAGAGCCATAGCCTTGAGCAAATGAAGA
rJMSF026A06- TCGAGAGCTGAGGTCTTGAACCCCTGCACCTCCAGAGCCATAGCCTTGAGCAAATGAAGA
rJMSF027A06- TCGAGAGCTGAGGTCTTGAACCCCTGCACCTCCAGAGCCATAGCCTTGAGCAAATGAAGA
JMSF026A06+ TCGAGAGCTGAGGTCTTGAACCCCTGCACCTCCAGAGCCATAGCCTTGAGCAAATGAAGA
JMSF027A06+ TCGAGAGCTGAGGTCTTGAACCCCTGCACCTCCAGAGCCATAGCCTTGAGCAAATGAAGA
JMSF002L13+ TCCAGAGCCATAGCCTTGAGCAAATGAAGA
JMFN012I03+ TCGAGAGCTGAGGTCTTGAACCCCTGCACCTCCAGAGCCATAGCCTTGAGCAAATGAAGA
____________________________________________________________
consensus TCGAGAGCTGAGGTCTTGAACCCCTGCACCTCCAGAGCCATAGCCTTGAGCAAATGAAGA
. : . : . : . : . : . :
rJMSF002L13- GCGGCGTCCTTGGCGTCGATGCCGATGGCTTTCTCGGCTTCTTCTTCGGCTGACTTGGCC
JMFN029G06+ GCGGCGTCCTTGGCGTCGATGCCGATGGCTTTCTCGGCTTCTTCTTCGGCTGACTTGGCC
rJMSF026A06- GCGGCGTCCTTGGCGTCGATGCCGATGGCTTTCTCGGCTTCTTCTTCGGCTGACTTGGCC
rJMSF027A06- GCGGCGTCCTTGGCGTCGATGCCGATGGCTTTCTCGGCTTCTTCTTCGGCTGACTTGGCC
JMSF026A06+ GCGGCGTCCTTGGCGTCGATGCCGATGGCTTTCTCGGCTTCTTCTTCGGCTGACTTGGCC
JMSF027A06+ GCGGCGTCCTTGGCGTCGATGCCGATGGCTTTCTCGGCTTCTTCTTCGGCTGACTTGGCC
JMSF002L13+ GCGGCGTCCTTGGCGTCGATGCCGATGGCTTTCTCGGCTTCTTCTTCGGCTGACTTGGCC
JMFN012I03+ GCGGCGTCCTTGGCGTCGATGCCGATGGCTTTCTCGGCTTCTTCTTCGGCTGACTTGGCC
____________________________________________________________
consensus GCGGCGTCCTTGGCGTCGATGCCGATGGCTTTCTCGGCTTCTTCTTCGGCTGACTTGGCC
. : . : . : . : . : . :
rJMSF002L13- AGCGTCATCCTCATCGACGACGACAGGTCCTTGGCCGTCCTGG
JMFN029G06+ AGCGTCATCCTCATCGACGACGACAGGTCCTTGGCCGTCCTGGCTTGAGCCAGACGCTGC
rJMSF026A06- AGCGTCATCCTCATCGACGACGACAGGTCCTTGGCCGTCCTGGCTTGAGCCAGACGCTGC
rJMSF027A06- AGCGTCATCCTCATCGACGACGACAGGTCCTTGGCCGTCCTGGCTTGAGCCAGACGCTGC
JMSF026A06+ AGCGTCATCCTCATCGACGACGACAGGTCCTTGGCCGTCCTGGCTTGAGCCAGACGCTGC
JMSF027A06+ AGCGTCATCCTCATCGACGACGACAGGTCCTTGGCCGTCCTGGCTTGAGCCAGACGCTGC
JMSF002L13+ AGCGTCATCCTCATCGACGACGACAGGTCCTTGGCCGTCCTGGCTTGAGCCAGACGCTGC
JMFN012I03+ AGCGTCATCCTCATCGACGACGACAGGTCCTTGGCCGTCCTGGCTTGAGCCAGACGCTGC
____________________________________________________________
consensus AGCGTCATCCTCATCGACGACGACAGGTCCTTGGCCGTCCTGGCTTGAGCCAGACGCTGC
. : . : . : . : . : . :
JMFN029G06+ GCGCCTAGGACGAAGTGG
rJMSF026A06- GCGCCTAGGACGAAGTGGCGCCTGGCTTGGATAGTACGGGCTTGTCTCCGCATCTGCAGC
rJMSF027A06- GCGCCTAGGACGAAGTGGCGCCTGGCTTGGATAGTACGGGCTTGTCTCCGCATCTGCAGC
JMSF026A06+ GCGCCTAGGACGAAGTGGCGCCTGGCTTGGATAGTACGGGCTTGTCTCCGCATCTGCAGC
JMSF027A06+ GCGCCTAGGACGAAGTGGCGCCTGGCTTGGATAGTACGGGCTTGTCTCCGCATCTGCAGC
JMSF002L13+ GCGCCTAGGACGAAGTGGCGCCTGGCTTGGATAGTACGGGCTTGTCTCCGCATCTGCAGC
JMFN012I03+ GCGCCTAGGACGAAGTGGCGCCTGGCTTGGATAGTACGGGCTTGTCTCCGCATCTGCAGC
____________________________________________________________
consensus GCGCCTAGGACGAAGTGGCGCCTGGCTTGGATAGTACGGGCTTGTCTCCGCATCTGCAGC
. : . : . : . : . : . :
rJMSF026A06- TTAGAGTAGAGATTCTGGGGGATGTTATGCATAAACAGGTACGTGAAGA
rJMSF027A06- TTAGAGTAGAGATTCTGGGGGATGTTATGCATAAACAGGTACGTGAAGATGGAAATCAAA
JMSF026A06+ TTAGAGTAGAGATTCTGGGGGATGTTATGCATAAACAGGTACGTGAAGATGGAAATCAAA
JMSF027A06+ TTAGAGTAGAGATTCTGGGGGATGTTATGCATAAACAGGTACGTGAAGATGGAAATCAAA
JMSF002L13+ TTAGAGTAGAGATTCTGGGGGATGTTATGCATAAACAGGTACGTGAAGATGGAAATCAAA
JMFN012I03+ TTAGAGTAGAGATTCTGGGGGATGTTATGCATAAACAGGTACGTGAAGATGGAAATCAAA
____________________________________________________________
consensus TTAGAGTAGAGATTCTGGGGGATGTTATGCATAAACAGGTACGTGAAGATGGAAATCAAA
. : . : . : . : . : . :
JMSF026A06+ ATCAGAACAGCCTGTAGAAGAAGATCGGTCCACATCTTGCTTATACTTTGATTACTTTCT
JMSF027A06+ ATCAGAACAGCCTGTAGAAGAAGATCGGTCCACATCTTGCTTATACTTTGATTACTTTCT
JMSF002L13+ ATCAGAACAGCCTGTAGAAGAAGATCGGTCCACATCTTGCTTATACTTTGATTACTTTCT
JMFN012I03+ ATCAGAACAGCCTGTAGAAGAAGATCGGTCCACATCTTGCTTATACTTTGATTACTTTCT
____________________________________________________________
consensus ATCAGAACAGCCTGTAGAAGAAGATCGGTCCACATCTTGCTTATACTTTGATTACTTTCT
. : . : . : . : . : . :
JMSF026A06+ CTCAATTTTTCAGTAGAAATGAATGAACTTGCT
JMSF027A06+ CTCAATTTTTCAGTAGAAATGAATGAACTTGCT
JMSF002L13+ CTCAATTTTTCAGTAGAAATGAATGAACTTGCT
JMFN012I03+ CTCAATTTTTCAGTAGAAATGAATGAACTTGCTAATTCCGATCGCGGTTCGCGGAGGCCA
____________________________________________________________
consensus CTCAATTTTTCAGTAGAAATGAATGAACTTGCTAATTCCGATCGCGGTTCGCGGAGGCCA