Contig 008923:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF038G13-                                                                AGTTCG
                      ____________________________________________________________
consensus                                                                   AGTTCG
 
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rJMFF038G13-          TTTCCAATGGAGCAATTTAGCTAGCCCAGAATACAAGTAGTTGGTTTCCAAATGGAGCAA
                      ____________________________________________________________
consensus             TTTCCAATGGAGCAATTTAGCTAGCCCAGAATACAAGTAGTTGGTTTCCAAATGGAGCAA
 
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rJMFF038G13-          ATTAAAGAGTACGCATAACAAACATCCATTTACCTAGCTGGATCATACTTTAATTTTAGA
JMFN037G13+                                          ACCTAGCTGGATCATACTNTAATTTTAGA
                      ____________________________________________________________
consensus             ATTAAAGAGTACGCATAACAAACATCCATTTACCTAGCTGGATCATACTTTAATTTTAGA
 
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rJMFF038G13-          ATTAGCTAGCTATATATGTATTTGATCTGAACTGTTATATATAGGTTTTGAATATAATTA
JMFN037G13+           ATTAGCTAGCTATATATGTATTGATTCTGAACTGTTATATATAGGTTTGNAATATAATTA
JMFN033K09+                                                             AATATAATTA
                      ____________________________________________________________
consensus             ATTAGCTAGCTATATATGTATTTGTTCTGAACTGTTATATATAGGTTTTGAATATAATTA
 
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rJMFF038G13-          ATGTTTGATGATTACATGCAAGAGCAAGACAAAAATATGTTAAGCTAAGGGTAACTCTGA
JMFN037G13+           ATGTTTGATGATTACATGCAAGAGCAAGACAAAAATATGTTAAGCTAAGGGTAACTCTGA
JMFN033K09+           ATGTTTGATGATTACATGCAAGAGCAAGACAAAAATATGTTAAGCTAAGGGTAACTCTGA
JMFN040C09+                               AGAGCAAGACAAAAATATGTTAAGCTAAGGGTAACTCTGA
JMFN025L09+                                        CAAAAATATGTTAAGCTAAGGGTAACTCTGA
JMFN032B16+                                   CAAGACAAAAATATGTTAAGCTAAGGGTAACTCTGA
JMFN010G16+                                                      GCTAAGGGTAACTCTGA
                      ____________________________________________________________
consensus             ATGTTTGATGATTACATGCAAGAGCAAGACAAAAATATGTTAAGCTAAGGGTAACTCTGA
 
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rJMFF038G13-          TCTCATCTCTCAGCTAAGCTACAAATAGGAGGGATGACTCATGCTCTGCCCACTAGAAGC
JMFN037G13+           TCTCATCTCTCAGCTAAGCTACAAATAGGAGGGATGACTCATGCTCTGCCCACTAGAAGC
JMFN033K09+           TCTCATCTCTCAGCTAAGCTACAAATAGGAGGGATGACTCATGCTCTGCCCACTAGAAGC
JMFN040C09+           TCTCATCTCTCAGCTAAGCTACAAATAGGAGGGATGACTCATGCTCTGCCCACTAGAAGC
JMFN046N03+                         TAAGCTACAAATAGGAGGGATGACTCATGCTCTGCCCACTAGAAGC
JMFN025L09+           TCTCATCTCTCAGCTAAGCTACAATAGGGAGGGATGACTCATGCTCTGCCCACTAGAAGC
JMFS043B10-                      AGCTAAGCTACAAATAGGAGGGATGACTCATGCTCTGCCCACTAGAAGC
JMFS045E05-                      AGCTAAGCTACAAATAGGAGGGATGACTCATGCTCTGCCCACTAGAAGC
JMFN032B16+           TCTCATCTCTCAGCTAAGCTACAAATAGGAGGGATGACTCATGCTCTGCCCACTAGAAGC
JMFN010G16+           TCTCATCTCTCAGCTAAGCTACAAATAGGAGGGATGACTCATGCTCTGCCCACTAGAAGC
                      ____________________________________________________________
consensus             TCTCATCTCTCAGCTAAGCTACAAATAGGAGGGATGACTCATGCTCTGCCCACTAGAAGC
 
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rJMFF038G13-          AGCAGAAGGGGAGAAAGCTAAAATGACAAGAACTACCAGAATGCAAATAGGGAGCAGCAG
JMFN037G13+           AGCAGAAGGGGAGAAAGCTAAAATGACAAGAACTACCAGAATGCAAATAGGGAGCAGCAG
JMFN033K09+           AGCAGAAGGGGAGAAAGCTAAAATGACAAGAACTACCAGAATGCAAATAGGGAGCAGCAG
JMFN040C09+           AGCAGAAGGGGAGAAAGCTAAAATGACAAGAACTACCAGAATGCAAATAGGGAGCAGCAG
JMFN046N03+           AGCAGAAGGGGAGAAAGCTAAAATGACAAGAACTACCAGAATGCAAATAGGGAGCAGCAG
JMFN025L09+           AGCAGAAGGGGAGAAAGCTAAAATGACAAGAACTACCAGAATGCAAATAGGGAGCAGCAG
JMFS043B10-           AGCAGAAGGGGAGAAAGCTAAAATGACAAGAACTACCAGAATGCAAATAGGGAGCAGCAG
JMFS045E05-           AGCAGAAGGGGAGAAAGCTAAAATGACAAGAACTACCAGAATGCAAATAGGGAGCAGCAG
JMFN032B16+           AGCAGAAGGGGAGAAAGCTAAAATGACAAGAACTACCAGAATGCAAATAGGGAGCAGCAG
JMFN010G16+           AGCAGAAGGGGAGAAAGCTAAAATGACAAGAACTACCAGAATGCAAATAGGGAGCAGCAG
                      ____________________________________________________________
consensus             AGCAGAAGGGGAGAAAGCTAAAATGACAAGAACTACCAGAATGCAAATAGGGAGCAGCAG
 
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rJMFF038G13-          CAGCATGAACGGCGGCGGCGGCAACGGCGGCAAGATCAACGGCAGAAGCAGCACCGACGC
JMFN037G13+           CAGCATGAACGGCGGCGGCGGCAACGGCGGCAAGATCAACGGCAGAAGCAGCACCGACGC
JMFN033K09+           CAGCATGAACGGCGGCGGCGGCAACGGCGGCAAGATCAACGGCAGAAGCAGCACCGACGC
JMFN040C09+           CAGCATGAACGGCGGCGGCGGCAACGGCGGCAAGATCAACGGCAGAAGCAGCACCGACGC
JMFN046N03+           CAGCATGAACGGCGGCGGCGGCAACGGCGGCAAGATCAACGGCAGAAGCAGCACCGACGC
JMFN025L09+           CAGCATGAACGGCGGCGGCGGCAACGGCGGCAAGATCAACGGCAGAAGCAGCACCGACGC
JMFS043B10-           CAGCATGAACGGCGGCGGCGGCAACGGCGGCAAGATCAACGGCAGAAGCAGCACCGACGC
JMFS045E05-           CAGCATGAACGGCGGCGGCGGCAACGGCGGCAAGATCAACGGCNGAAGCCCCACCGCCCC
JMFN032B16+           CAGCATGAACGGCGGCGGCGGCAACGGCGGCAAGATCAACGGCAGAAGCAGCACCGACGC
JMFN010G16+           CAGCATGAACGGCGGCGGCGGCAACGGCGGCAAGATCAACGGCAGAAGCAGCACCGACGC
                      ____________________________________________________________
consensus             CAGCATGAACGGCGGCGGCGGCAACGGCGGCAAGATCAACGGCAGAAGCAGCACCGACGC
 
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rJMFF038G13-          CGTCAGATACACAAGCAGAACAAACGATTCTGAACTGAAATACTTCATACTCAACCACCG
JMFN037G13+           CGTCAGACACACAAGCAGAACAAACGATTCTGAACTGAAATACTTCATACTCAACCACCG
JMFN033K09+           CGTCAGACACACAAGCAGAACAAACGATTCTGAACTGAAATACTTCATACTCAACCACCG
JMFN040C09+           CGTCAGACACACAAGCAGAACAAACGATTCTGAACTGAAATACTTCATACTCAACCACCG
JMFN046N03+           CGTCAGACACACAAGCAGAACAAACGATTCTGAACTGAAATACTTCATACTCAACCACCG
JMFN025L09+           CGTCAGACACACAAGCAGAACAAACGATTCTGAACTGAAATACTTCATACTCAACCACCG
JMFS043B10-           CGTCAGACACACAAGCAGAACAAACGATTCTGAACTGAAATACTTCATACTCAACCACCG
JMFS045E05-           CGTCNGACCCACCCCCNNAACANNCGATTCTGAACTGAAATACTTCATACTCAACCACCG
JMFN032B16+           CGTCAGACACACAAGCAGAACAAACGATTCTGAACTGAAATACTTCATACTCAACCACCG
JMFN010G16+           CGTCAGACACACAAGCAGAACAAACGATTCTGAACTGAAATACTTCATACTCAACCACCG
                      ____________________________________________________________
consensus             CGTCAGACACACAAGCAGAACAAACGATTCTGAACTGAAATACTTCATACTCAACCACCG
 
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rJMFF038G13-          CGCCCTTTTCGCATGCCCCCCGCCGCCTCCTTGCGATACCCGCCGCCATTGGTATTCCTT
JMFN037G13+           CGCCCTTTTCGCATGCCCCCCGCCGCCTCCTTGCGATACCCGCCGCCATTGGTATTCCTT
JMFN033K09+           CGCCCTTTTCGCATGCCCCCCGCCGCCTCCTTGCGATACCCGCCGCCATTGGTATTCCTT
JMFN040C09+           CGCCCTTTTCGCATGCCCCCCGCCGCCTCCTTGCGATACCCGCCGCCATTGGTATTCCTT
JMFN046N03+           CGCCCTTTTCGCATGCCCCCCGCCGCCTCCTTGCGATACCCGCCGCCATTGGTATTCCTT
JMFN025L09+           CGCCCTTTTCGCATGCCCCCCGCCGCCTCCTTGCGATACCCGCCGCCATTGGTATTCCTT
JMFS043B10-           CGCCCTTTTCGCATGCCCCCCGCCGCCTCCTTGCGATACCCGCCGCCATTGGTATTCCTT
JMFS045E05-           CGCCCTTTTCGCATGCCCCCCGCCGCCTCCTTGCGATACCCGCCGCCATTGGTATTCCTT
JMFN032B16+           CGCCCTTTTCGCATGCCCCCCGCCGCCTCCTTGCGATACCCGCCGCCATTGGTATTCCTT
JMFN010G16+           CGCCCTTTTCGCATGCCCCCCGCCGCCTCCTTGCGATACCCGCCGCCATTGGTATTCCTT
                      ____________________________________________________________
consensus             CGCCCTTTTCGCATGCCCCCCGCCGCCTCCTTGCGATACCCGCCGCCATTGGTATTCCTT
 
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rJMFF038G13-          CAAATTCAAATTCTTCCTGCTCCCAAAACTCTCCGCCGCAGAGTACCCATACATCTCGTC
JMFN037G13+           CAAATTCAAATTCTTCCTGCTCCCAAAACTCTCCGCCGCAGAGTACCCATACATCTCGTC
JMFN033K09+           CAAATTCAAATTCTTCCTGCTCCCAAAACTCTCCGCCGCAGAGTACCCATACATCTCGTC
JMFN040C09+           CAAATTCAAATTCTTCCTGCTCCCAAAACTCTCCGCCGCAGAGTACCCATACATCTCGTC
JMFN046N03+           CAAATTCAAATTCTTCCTGCTCCCAAAACTCTCCGCCGCAGAGTACCCATACATCTCGTC
JMFN025L09+           CAAATTCAAATTCTTCCTGCTCCCAAAACTCTCCGCCGCAGAGTACCCATACATCTCGTC
JMFS043B10-           CAAATTCAAATTCTTCCTGCTCCCAAAACTCTCCGCCGCAGAGTACCCATACATCTCGTC
JMFS045E05-           CAAATTCAAATTCTTCCTGCTCCCAAAACTCTCCGCCGCAGAGTACCCATACATCTCGTC
JMFN032B16+           CAAATTCAAATTCTTCCTGCTCCCAAAACTCTCCGCCGCAGAGTACCCATACATCTCGTC
JMFN010G16+           CAAATTCAAATTCTTCCTGCTCCCAAAACTCTCCGCCGCAGAGTACCCATACATCTCGTC
                      ____________________________________________________________
consensus             CAAATTCAAATTCTTCCTGCTCCCAAAACTCTCCGCCGCAGAGTACCCATACATCTCGTC
 
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rJMFF038G13-          TCTCATCGTCTCTGCACCCATTATTGAATTGAAT-CCAAAGAAACAGCTAGCTCTGATCG
JMFN037G13+           TCTCATCGTCTTTGCACCCATTATTGAATTGAAT-CCAAAGAAACAGCTAGCTCTGATCG
JMFN033K09+           TCTCATCGTCTTTGCACCCATTATTGAATTGAAT-CCAAAGAAACAGCTAGCTCTGATCG
JMFN040C09+           TCTCATCGTCTTTGCACCCATTATTGAATTGAAT-CCAAAGAAACAGCTAGCTCTGATCG
JMFN046N03+           TCTCATCGTCTTTGCACCCATTATTGAATTGAAT-CCAAAGAAACAGCTAGCTCTGATCG
JMFN025L09+           TCTCATCGTCTTTGCACCCATTATTGAATTGAATGCCAAAGAAACAGCTAGCTCTGATCG
JMFS043B10-           TCTCATCGTCTTTGCACCCATTATTGAATTGAAT-CCAAAGAAACAGCTAGCTCTGATCG
JMFS045E05-           TCTCATCGTCTTTGCACCCATTATTGAATTGAAT-CCAAAGAAACAGCTAGCTCTGATCG
JMFN032B16+           TCTCATCGTCTTTGCACCCATTATTGAATTGAAT-CCAAAGAAACAGCTAGCTCTGATCG
JMFN010G16+           TCTCATCGTCTTTGCACCCATTATTGAATTGAAT-CCAAAGAAACAGCTAGCTCTGATCG
                      ____________________________________________________________
consensus             TCTCATCGTCTTTGCACCCATTATTGAATTGAAT-CCAAAGAAACAGCTAGCTCTGATCG
 
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rJMFF038G13-          ATCTTATCTTCTCA                                              
JMFN037G13+           ATCTTATCTTCTCATAAAAATCCAATCTTGAGAGTGAACGAGAGAA              
JMFN033K09+           ATCTTATCTTCTCATAAAAATCCAATCTTGAGAGTGAACGAGAGAACAAATTAAAACAAA
JMFN040C09+           ATCTTATCTTCTCATAAAAATCCAATCTTGAGAGTGAACGAGAGAACAAATTAAAACAAA
JMFN046N03+           ATCTTATCTTCTCATAAAAATCCAATCTTGAGAGTGAACGAGAGAACAAATTAAAACAAA
JMFN025L09+           ATCTTATCTTCTCATAAAAATCCAATCTTGAGAGTGAACGAGAGAACAAATTAAAACAAA
JMFS043B10-           ATCTTATCTTCTCATAAAAATCCAATCTTGAGAGTGAACGAGAGAACAAATTAAAACAAA
JMFS045E05-           ATCTTATCTTCTCATAAAAATCCAATCTTGAGAGTGAACGAGAGAACAAATTAAAACAAA
JMFN032B16+           ATCTTATCTTCTCATAAAAATCCAATCTTGAGAGTGAACGAGAGAACAAATTAAAACAAA
JMFN010G16+           ATCTTATCTTCTCATAAAAATCCAATCTTGAGAGTGAACGAGAGAACAAATTAAAACAAA
                      ____________________________________________________________
consensus             ATCTTATCTTCTCATAAAAATCCAATCTTGAGAGTGAACGAGAGAACAAATTAAAACAAA
 
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JMFN033K09+           CCCAATTGCATTATATTGAAGAAAGAGTGATCGATGAGTATATAGTGGTTGATGAAAAAG
JMFN040C09+           CCCAATTGCATTATATTGAAGAAAGAGTGATCGATGAGTATATAGTGGTTGATGAAAAAG
JMFN046N03+           CCCAATTGCATTATATTGAAGAAAGAGTGATCGATGAGTATATAGTGGTTGATGAAAAAG
JMFN025L09+           CCCAATTGCATTATATTGAAGAAAGAGTGATCGATGAGTATATAGTGGTTGATGAAAAAG
JMFS043B10-           CCCAATTGCATTATATTGAAGAAAGAGTGATCGATGAGTATATAGTGGTTGATGAAAAAG
JMFS045E05-           CCCAATTGCATTATATTGAAGAAAGAGTGATCGATGAGTATATAGTGGTTGATGAAAAAG
JMFN032B16+           CCCAATTGCATTATATTGAAGAAAGAGTGATCGATGAGTATATAGTGGTTGATGAAAAAG
JMFN010G16+           CCCAATTGCATTATATTGAAGAAAGAGTGATCGATGAGTATATAGTGGTTGATGAAAAAG
                      ____________________________________________________________
consensus             CCCAATTGCATTATATTGAAGAAAGAGTGATCGATGAGTATATAGTGGTTGATGAAAAAG
 
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JMFN033K09+           NGATATTAGTTTGGAATGGGGAGAAGGA                                
JMFN040C09+           -GATATTAGTTTGGAATGGGGAGAAGGATTTGGTTTAGGGATCTGATATGA         
JMFN046N03+           -GATATTAGTTTGGAATGGGGAGAAGGATTTGGTTTAGGGATCTGATATGA         
JMFN025L09+           -GATATTAGTT                                                 
JMFS043B10-           -GATATTAGTTTGGAATGGGGA                                      
JMFS045E05-           -GATATTAGTTTGGAATGGGGA                                      
JMFN032B16+           -GATATTAGTTTGGAATGGGGAGAAGGATTTGGTTTAGGGATCTGATATGA         
JMFN010G16+           -GATATTAGTTTGGAATGGGGAGAAGGATTTGGTTTAGGGATCTGATATGATGAATTTGG
                      ____________________________________________________________
consensus             -GATATTAGTTTGGAATGGGGAGAAGGATTTGGTTTAGGGATCTGATATGATGAATTTGG