Contig 008922:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF051O19+                                                            GAATAGGGTT
                      ____________________________________________________________
consensus                                                               GAATAGGGTT
 
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rJMSF051O19+          CNCCCTCCAAGGGCAGATTGGTATGAAGAGTTTTATGCGTGGGCGATGAACACATTCACA
                      ____________________________________________________________
consensus             CNCCCTCCAAGGGCAGATTGGTATGAAGAGTTTTATGCGTGGGCGATGAACACATTCACA
 
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rJMSF051O19+          AAAGCTTACGAGGCAGAGATTGCAGCTTACAAGTNTGAACTTTTTGCTAATTTGAGAGGG
                      ____________________________________________________________
consensus             AAAGCTTACGAGGCAGAGATTGCAGCTTACAAGTNTGAACTTTTTGCTAATTTGAGAGGG
 
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rJMSF051O19+          CAAGTGAAGAGCGTTTTGGAAATTGGCATTGGGACCGGTCCCAATNTTAAGTATTACTCT
JMFN010B17-                                                                      T
                      ____________________________________________________________
consensus             CAAGTGAAGAGCGTTTTGGAAATTGGCATTGGGACCGGTCCCAATNTTAAGTATTACTCT
 
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rJMSF051O19+          GGCGATATGGACTTCGTTTATGGCATAGATCCAAACCGGAAGATGGAGAAGTATGCACAG
JMFN010B17-           GGCGATATGGACTTCGTTTATGGCATAGATCCAAACCGGAAGATGGAGAAGTATGCACAG
                      ____________________________________________________________
consensus             GGCGATATGGACTTCGTTTATGGCATAGATCCAAACCGGAAGATGGAGAAGTATGCACAG
 
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rJMSF051O19+          GCGGCAGCAGAAGCAGCTGGCCTTCCNCCCGACAATTTCAAATTTATGCAAGCGGTTTCG
JMFN010B17-           GCGGCAGCAGAAGCAGCTGGCCTTCCACCCGACAATTTCAAATTTATGCAAGCGGTTTCG
                      ____________________________________________________________
consensus             GCGGCAGCAGAAGCAGCTGGCCTTCCACCCGACAATTTCAAATTTATGCAAGCGGTTTCG
 
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rJMSF051O19+          GAGGCCTTGCCTCTCGGTGATGCTTCTGTGGATGCTGTTGTTGGGACCCTCGTTTTATGT
JMFN010B17-           GAGGCCTTGCCTCTCGGTGATGCTTCTGTGGATGCTGTTGTTGGGACCCTCGTTTTATGT
                      ____________________________________________________________
consensus             GAGGCCTTGCCTCTCGGTGATGCTTCTGTGGATGCTGTTGTTGGGACCCTCGTTTTATGT
 
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rJMSF051O19+          TCCGTTAAAGATGTCGATTTGACNCTGCAGGAGGTGAGGCGGGTGCTGAANCCNGGCGGC
JMFN010B17-           TCCGTTAAAGATGTCGATTTGACACTGCAGGAGGTGAGGCGGGTGCTGAAGCCAGGCGGC
                      ____________________________________________________________
consensus             TCCGTTAAAGATGTCGATTTGACACTGCAGGAGGTGAGGCGGGTGCTGAAGCCAGGCGGC
 
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rJMSF051O19+          GTTTTTGTGTTTGTAGAACACGTCGCTGCNCAAGATGGAACNCTACATAGGTTTGTACAA
JMFN010B17-           GTTTTTGTGTTTGTAGAACACGTCGCTGCACAAGATGGAACACTACATAGGTTTGTACAA
                      ____________________________________________________________
consensus             GTTTTTGTGTTTGTAGAACACGTCGCTGCACAAGATGGAACACTACATAGGTTTGTACAA
 
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rJMSF051O19+          GGATTGCTTGATCCTTTACAGCAGTTTGTGGCAGATGGGTGCCATCTCNCTAGGAAAACT
JMFN010B17-           GGATTGCTTGATCCTTTACAGCAGTTTGTGGCAGATGGGTGCCATCTCACTAGGAAAACT
                      ____________________________________________________________
consensus             GGATTGCTTGATCCTTTACAGCAGTTTGTGGCAGATGGGTGCCATCTCACTAGGAAAACT
 
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rJMSF051O19+          GGGAAGAGTATTGCAGATGCAGGGTTTGCAGAGGTTGATATTCATCAAGCTTCCTTATNT
JMFN010B17-           GGGAAGAGTATTGCAGATGCAGGGTTTGCAGAGGTTGATATTCATCAAGCTTCCTTATCT
                      ____________________________________________________________
consensus             GGGAAGAGTATTGCAGATGCAGGGTTTGCAGAGGTTGATATTCATCAAGCTTCCTTATCT
 
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rJMSF051O19+          TNTGCTTCACTCATAAATCCTCATGTCTATGGNGTAGCTCACAACTAGATTCAATCTTAC
JMFN010B17-           TCTGCTTCACTCATAAATCCTCATGTCTATGGTGTAGCTCACAACTAGATTCAATCTTAC
                      ____________________________________________________________
consensus             TCTGCTTCACTCATAAATCCTCATGTCTATGGTGTAGCTCACAACTAGATTCAATCTTAC
 
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rJMSF051O19+          TTTGTANGTAATCATTTCAATCTTGATAATA                             
JMFN010B17-           TTTGTATGTAATCATTTCAATCTTGATAATACAATAAAGTGGGCATTGAACCAAAAATAT
                      ____________________________________________________________
consensus             TTTGTATGTAATCATTTCAATCTTGATAATACAATAAAGTGGGCATTGAACCAAAAATAT