Contig 008918:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008M22Sequence627008918 (2)ref|XP_002307764.1|1e-90maoC-like dehydratase domain-containing family protein [Populus trichocarpa] gb
JMSF008P10Sequence270023131ref|XP_009764388.1|7e-15PREDICTED: enoyl-CoA hydratase 2, peroxisomal-like [Nicotiana sylvestris]332008918 (2)ref|XP_007017951.1|1e-34Enoyl-CoA hydratase 2 isoform 1 [Theobroma cacao] gb|EOY15176.1| Enoyl-CoA hydra

Alignment

This contig is upended


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JMFN008M22-                                            TGTTCTAGAAGTTGAAATCAAGAGCTA
                      ____________________________________________________________
consensus                                              TGTTCTAGAAGTTGAAATCAAGAGCTA
 
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JMFN008M22-           TGAGAAAGTGTCGGGTGATCTTCTGTGTATGAACAGGATGGCTGTTTTTCTGAGGGGTGC
                      ____________________________________________________________
consensus             TGAGAAAGTGTCGGGTGATCTTCTGTGTATGAACAGGATGGCTGTTTTTCTGAGGGGTGC
 
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JMFN008M22-           TGGTGGATTCTCAAAGTCTTCCAATCCTTATTCATATTCCAAATATCCAGCAAATCAGAC
                      ____________________________________________________________
consensus             TGGTGGATTCTCAAAGTCTTCCAATCCTTATTCATATTCCAAATATCCAGCAAATCAGAC
 
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JMFN008M22-           TGCTGCTCCTAAAATCCCCAAAGGCCAGCCATTTGTTGTTTTTGAGGATTATTTGCAGCC
                      ____________________________________________________________
consensus             TGCTGCTCCTAAAATCCCCAAAGGCCAGCCATTTGTTGTTTTTGAGGATTATTTGCAGCC
 
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JMFN008M22-           ACCACAGGCATTGCTTTACAGGCTCTCCGGTGATTACAATCCCCTGCATTCTGATCCCAG
                      ____________________________________________________________
consensus             ACCACAGGCATTGCTTTACAGGCTCTCCGGTGATTACAATCCCCTGCATTCTGATCCCAG
 
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rJMSF008P10+                           GGTTTTCTCGCCCAATNTNGCATGGGCTGTGCACACTTGGNTT
JMFN008M22-           GGTTGCAGATGTTGCAGGGTTTTCTCGCCCAATTTTGCATGGGCTGTGCACACTTGGATT
                      ____________________________________________________________
consensus             GGTTGCAGATGTTGCAGGGTTTTCTCGCCCAATTTTGCATGGGCTGTGCACACTTGGATT
 
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rJMSF008P10+          TGCNGTCAGGGCNATCATAAAATGCATCNGCAAAGGGGACCCAAACATGATAAAGAACAT
JMFN008M22-           TGCTGTCAGGGCTATCATAAAATGCATCTGCAAAGGGGACCCAAACATGATAAAGAACAT
                      ____________________________________________________________
consensus             TGCTGTCAGGGCTATCATAAAATGCATCTGCAAAGGGGACCCAAACATGATAAAGAACAT
 
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rJMSF008P10+          ATCTGGCAGATTTCTNTTACATGNGTNTCCGGGTGANACNTTAATGACAGAAATGTGGCT
JMFN008M22-           ATCTGGCAGATTTTTATTACATGTGTATCCGGGTGAAACCTTAATGACAGAAATGTGGCT
                      ____________________________________________________________
consensus             ATCTGGCAGATTTTTATTACATGTGTATCCGGGTGAAACCTTAATGACAGAAATGTGGCT
 
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rJMSF008P10+          GGAAGGTNTAAGGGTTATATATCAGGTGAAGGTGAAAGAACGTNAAAGGGCAGTGCTNGC
JMFN008M22-           GGAAGGTTTAAGGGTTATATATCAGGTGAAGGTGAAAGAACGTAAAAGGGCAGTGCTTGC
                      ____________________________________________________________
consensus             GGAAGGTTTAAGGGTTATATATCAGGTGAAGGTGAAAGAACGTAAAAGGGCAGTGCTTGC
 
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rJMSF008P10+          TGGTTT                                                      
JMFN008M22-           TGGTTTTGTAGATCTTCACCGTTTAAGTTCATCTCTGTGACTGGAGGTTCTGTTTTTTCC
                      ____________________________________________________________
consensus             TGGTTTTGTAGATCTTCACCGTTTAAGTTCATCTCTGTGACTGGAGGTTCTGTTTTTTCC
 
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JMFN008M22-           TCTATGAAATATGTTATATGTGTAACTGGAGGAGTTTGTTTCTCCTCTATCATTCCATGT
                      ____________________________________________________________
consensus             TCTATGAAATATGTTATATGTGTAACTGGAGGAGTTTGTTTCTCCTCTATCATTCCATGT