Contig 008915:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008C04Sequence554008915 (3)ref|XP_009594196.1|4e-35PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Nicotiana tom
JMFN012D14Sequence557008915 (3)ref|XP_009594196.1|7e-36PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Nicotiana tom
JMFN031J02Sequence570008915 (3)ref|XP_009594196.1|4e-36PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Nicotiana tom

Alignment

This contig is upended


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JMFN031J02+                                  AGGGGTAGAACTGGGAAACTATGAACATTAGGGGTAT
                      ____________________________________________________________
consensus                                    AGGGGTAGAACTGGGAAACTATGAACATTAGGGGTAT
 
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JMFN031J02+           TCCGTCAGAATTGCAATCAAAAATTAAAATGAAAAAAAAAAAAAAAAAGGAAATAAAAAA
JMFN012D14+                                                           GGAAATACAAAA
JMFN008C04+                                                           GGAAATACAAAA
                      ____________________________________________________________
consensus             TCCGTCAGAATTGCAATCAAAAATTAAAATGAAAAAAAAAAAAAAAAAGGAAATACAAAA
 
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JMFN031J02+           TTTAGATTTCAGATAACCGTCTGCGTTTGGATCTAGATCATCTATCGGCTTTTCCTGTAC
JMFN012D14+           TTTAGATTTCAGATAACCGTCTGCGTTTGGATCTAGATCATCTATCGGCTTTTCCTGTAC
JMFN008C04+           TTTAGATTTCAGATAACCGTCTGCGTTTGGATCTAGATCATCTATCGGCTTTTCCTGTAC
                      ____________________________________________________________
consensus             TTTAGATTTCAGATAACCGTCTGCGTTTGGATCTAGATCATCTATCGGCTTTTCCTGTAC
 
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JMFN031J02+           AAACGAACTGAAGAAACGGAGCCGGATCGTAGGAGAACGGCGCCGCCGGGTGTTGCCACT
JMFN012D14+           AAACGAACTGAAGAAACGGAGCCGGATCGTAGGAGAACGGCGCCGCCGGGTGTTGCCACT
JMFN008C04+           AAAAGAACTGAAGAAACGGAGCCGGATCGTAGGAGAACGGCGCCGCCGGGTGTTGCCACT
                      ____________________________________________________________
consensus             AAACGAACTGAAGAAACGGAGCCGGATCGTAGGAGAACGGCGCCGCCGGGTGTTGCCACT
 
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JMFN031J02+           TCTTAAACACCACCGTCTGCGGCTTCTCCGCCTCTCTGCTCTCGTCCTTCTTACTGCTCG
JMFN012D14+           TCTTAAACACCACCGTCTGCGGCTTCTCCGCCTCTCTGCTCTCGTCCTTCTTACTGCTCG
JMFN008C04+           TCTTAAACACCACCGTCTGCGGCTTCTCCGCCTCTCTGCTCTCGTCCTTCTTACTGCTCG
                      ____________________________________________________________
consensus             TCTTAAACACCACCGTCTGCGGCTTCTCCGCCTCTCTGCTCTCGTCCTTCTTACTGCTCG
 
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JMFN031J02+           AGTTCGAACACGACTTGATCGCCGCCGTTAAATCGCTCGAATCCGGCGACGTAATCAGCG
JMFN012D14+           AGTTCGAACACGACTTGATCGCCGCCGTTAAATCGCTCGAATCCGGCGACGTAATCAGCG
JMFN008C04+           AGTTCGAACACGACTTGATCGCCGCCGTTAAATCGCTCGAATCCGGCGACGTAATCAGCG
                      ____________________________________________________________
consensus             AGTTCGAACACGACTTGATCGCCGCCGTTAAATCGCTCGAATCCGGCGACGTAATCAGCG
 
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JMFN031J02+           GCGATAGCAGCGGTATGGCCACATTCCAATCCGTCGAGCGGTTTATCTGGATCGACGCCG
JMFN012D14+           GCGATAGCAGCGGTATGGCCACATTCCAATCCGTCGAGCGGTTTATCTGGATCGACGCCG
JMFN008C04+           GCGATAGCAGCGGTATGGCCACATTCCAATCCGTCGAGCGGTTTATCTGGATCGACGCCG
                      ____________________________________________________________
consensus             GCGATAGCAGCGGTATGGCCACATTCCAATCCGTCGAGCGGTTTATCTGGATCGACGCCG
 
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JMFN031J02+           GCGCTTTCCGCTGCAATCGGCTCGACTGCCGCCGGTCCCCTGACAAATATTTCTTGTTCT
JMFN012D14+           GCGCTTTCCGCTGCAATCGGCTCGACTGCCGCCGGTCCCCTGACAAATATTTCTTGTTCT
JMFN008C04+           GCGCTTTCCGCTGCAATCGGCTCGACTGCCGCCGGTCCCCTGACAAATATTTCTTGTTCT
                      ____________________________________________________________
consensus             GCGCTTTCCGCTGCAATCGGCTCGACTGCCGCCGGTCCCCTGACAAATATTTCTTGTTCT
 
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JMFN031J02+           CCGCCATAACCGTATATGCGAGGACTGTAGAGACTAGAGAGAGAAACGTGCACAGTATAT
JMFN012D14+           CCGCCATAACCGTATATGCGAGGACTGTAGAGACTAGAGAGAGAAACGTGCACAGTATAT
JMFN008C04+           CCGCCATAACCGTATATGCGAGGACTGTAGAGACTAGAGAGAGAAACGTGCACAGTATAT
                      ____________________________________________________________
consensus             CCGCCATAACCGTATATGCGAGGACTGTAGAGACTAGAGAGAGAAACGTGCACAGTATAT
 
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JMFN031J02+           TTTGCTTTAGAGAGAGAAAATTTAGGGATTTGGTGAGAGAGAGAGAGAAGAGG       
JMFN012D14+           TTTGCTTTAGAGAGAGAAAATTTAGGGATTTGGTGAGAGAGAGAGAGAAGAGG       
JMFN008C04+           TTTGCTTTAGAGAGAGAAAATTTAGGGATTTGGTGAGAGAGAGAGAGAAGAGGGAAGTGT
                      ____________________________________________________________
consensus             TTTGCTTTAGAGAGAGAAAATTTAGGGATTTGGTGAGAGAGAGAGAGAAGAGGGAAGTGT