Contig 008908:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004I10Sequence663008908 (2)ref|XP_006364584.1|5e-21PREDICTED: NAC domain-containing protein 100-like [Solanum tuberosum]
JMSF042L01Sequence763023267ref|XP_004236015.1|1e-89PREDICTED: NAC domain-containing protein 100 [Solanum lycopersicum]733008908 (2)ref|XP_004236015.1|3e-05PREDICTED: NAC domain-containing protein 100 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF042L01-                                   ATCACCACCATTTACAATAACAGACAAGTAATGAA
                      ____________________________________________________________
consensus                                      ATCACCACCATTTACAATAACAGACAAGTAATGAA
 
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rJMSF042L01-          GAAGCTGAACAACATAATTTCATCAAGCTAAGCACTGCAGACATGCTGAACCCATAATTT
                      ____________________________________________________________
consensus             GAAGCTGAACAACATAATTTCATCAAGCTAAGCACTGCAGACATGCTGAACCCATAATTT
 
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rJMSF042L01-          CATAAACCTCAGGATTCAGAAAATCTCTCTCTCTATATATATATATATATACTTCCATAA
                      ____________________________________________________________
consensus             CATAAACCTCAGGATTCAGAAAATCTCTCTCTCTATATATATATATATATACTTCCATAA
 
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rJMSF042L01-          TCAGATGCGAACTGATCTTAACGTGGGAATATGCGAACTTTTGANGGACTGCACAACACC
                      ____________________________________________________________
consensus             TCAGATGCGAACTGATCTTAACGTGGGAATATGCGAACTTTTGANGGACTGCACAACACC
 
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rJMSF042L01-          TACTATATGANTGCACCCGCAAAGTCCACAGGCACATATCTAGGAGCCGTAATAACAGTG
                      ____________________________________________________________
consensus             TACTATATGANTGCACCCGCAAAGTCCACAGGCACATATCTAGGAGCCGTAATAACAGTG
 
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rJMSF042L01-          CAATTATATAGTAGTTGCGGTGCANTCTTTCAAAAGTTCGGTTCGCAAGTTAAGANTGGT
                      ____________________________________________________________
consensus             CAATTATATAGTAGTTGCGGTGCANTCTTTCAAAAGTTCGGTTCGCAAGTTAAGANTGGT
 
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rJMSF042L01-          TTTTATCAGATTATATATATATATGTNTGCACACACAATTCACTACACACCAATATAATT
JMFN004I10+                         ATATATATATGTATGCACACACAATTCACTACACACCAATATAATT
                      ____________________________________________________________
consensus             TTTTATCAGATTATATATATATATGTATGCACACACAATTCACTACACACCAATATAATT
 
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rJMSF042L01-          ATANTGATGAGAGTAATTAAAATATATTTNTGGGCTATTTTTCNAGATTTATTTAANTCT
JMFN004I10+           ATAATGATGAGAGTAATTAAAATATATTTTTGGGCTATTTTTCAAGATTTATTTAAATCT
                      ____________________________________________________________
consensus             ATAATGATGAGAGTAATTAAAATATATTTTTGGGCTATTTTTCAAGATTTATTTAAATCT
 
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rJMSF042L01-          CAGTAACTCCAGAGGCAGTCAAAGTCTTGTGGTCCTGGTGGAGGGGTTGATGGAGGGTCC
JMFN004I10+           CAGTAACTCCAGAGGCAGTCAAAGTCTTGTGGTCCTGGTGGAGGGGTTGATGGAGGGTCC
                      ____________________________________________________________
consensus             CAGTAACTCCAGAGGCAGTCAAAGTCTTGTGGTCCTGGTGGAGGGGTTGATGGAGGGTCC
 
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rJMSF042L01-          TGATGATCTTGGAAACACCTCTTTCCCACGGAGGAGATTTCAGTGTTTATGTCAGTGCTA
JMFN004I10+           TGATGATCTTGGAAACACCTCTTTCCCACGGAGGAGATTTCAGTGTTTATGTCAGTGCTA
                      ____________________________________________________________
consensus             TGATGATCTTGGAAACACCTCTTTCCCACGGAGGAGATTTCAGTGTTTATGTCAGTGCTA
 
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rJMSF042L01-          AGACCAGTTTCCTGAGACACTCCACTCGCTNTCTCCTTATTCTCTGTTTTGAAGCCATAG
JMFN004I10+           AGACCAGTTTCCTGAGACACTCCACTCGCTATCTCCTTATTCTCTGTTTTGAAGCCATAG
                      ____________________________________________________________
consensus             AGACCAGTTTCCTGAGACACTCCACTCGCTATCTCCTTATTCTCTGTTTTGAAGCCATAG
 
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rJMSF042L01-          TTTGCGAGCCAGTTCCTCAGGGTTGCNGGATCTTGCGTGGGGATTAGTGGGATTTGGAGA
JMFN004I10+           TTTGCGAGCCAGTTCCTCAGGGTTGCAGGATCTTGCATGGGGATTAATGGGATTTGGAGA
                      ____________________________________________________________
consensus             TTTGCGAGCCAGTTCCTCAGGGTTGCAGGATCTTGCGTGGGGATTAGTGGGATTTGGAGA
 
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rJMSF042L01-          GAATTTGTGGTGNTAGTAGTAGTGAAAGTGTTGGGGAT                      
JMFN004I10+           GAATTTGTGGTGGTAGTAGTAGTGAAAGTGTTGGGGATTATTGGAGAAATGGGTAGTGGT
                      ____________________________________________________________
consensus             GAATTTGTGGTGGTAGTAGTAGTGAAAGTGTTGGGGATTATTGGAGAAATGGGTAGTGGT
 
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JMFN004I10+           GAAAAGTTTAGCATATTCATATTCATCTCTTGTTGTTTGCTGGAGAAGCAGTGCACGTAG
                      ____________________________________________________________
consensus             GAAAAGTTTAGCATATTCATATTCATCTCTTGTTGTTTGCTGGAGAAGCAGTGCACGTAG
 
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JMFN004I10+           CTGGTGGCCTTGGCGGCGCCGCCGTGACAAGGCGGTGAATCTGATAAGGGTGGAAGAAGA
                      ____________________________________________________________
consensus             CTGGTGGCCTTGGCGGCGCCGCCGTGACAAGGCGGTGAATCTGATAAGGGTGGAAGAAGA
 
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JMFN004I10+           GGGGAATTCTGGGGTGCATTTCCGGTAGGGTAGTTGCATCTTATCATGCCAGAAATGTGG
                      ____________________________________________________________
consensus             GGGGAATTCTGGGGTGCATTTCCGGTAGGGTAGTTGCATCTTATCATGCCAGAAATGTGG
 
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JMFN004I10+           ACTTTTTTGCCACCTGAGCTCTTCTGAAACACTCTGCAGAGTACCCAGTCATTCTGCCTG
                      ____________________________________________________________
consensus             ACTTTTTTGCCACCTGAGCTCTTCTGAAACACTCTGCAGAGTACCCAGTCATTCTGCCTG