Contig 008907:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012G19Sequence498008907 (7)524008907 (7)
JMFF031P10Sequence561008907 (7)522008907 (7)
JMFN004H10Sequence636008907 (7)
JMFN019P19Sequence576008907 (7)
JMFN032N20Sequence444008907 (7)

Alignment

This contig is upended


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rJMFF012G19-                                                           GAGATACTAAT
JMFN032N20+                                    TTATTAACCGTAAAATCTTTATTGGAGATACTAAT
JMFF031P10+                         TTTTTTTTTTGTTATTAACCGTAAAATCTTTATTGGAGATACTAAT
rJMFF031P10-                                                               TACTAAT
JMFN019P19+                                    TTATTAACCGTAAAATCTTTATTGGAGATACTAAT
JMFN004H10+                                    TTATTAACCGTAAAATCTTTATTGGAGATACTAAT
                      ____________________________________________________________
consensus                           TTTTTTTTTTGTTATTAACCGTAAAATCTTTATTGGAGATACTAAT
 
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rJMFF012G19-          ATACAAACATTTGAGAACAAATATACATAAGTTCAACCACATATTGTGATTTACTTTCCC
JMFN032N20+           ATACAAACATTTGAGAACAAATATACATAAGTTCAACCACATATTGTGATTTACTTTCCC
JMFF031P10+           ATACAAACATTTGAGAACAAATATACATAAGTTCAACCACATATTGTGATTTACTTTCCC
JMFF012G19+                          AACAAATATACATAAGTTCAACCACATATTGTGATTTACTTTCCC
rJMFF031P10-          ATACAAACATTTGAGAACAAATATACATAAGTTCAACCACATATTGTGATTTACTTTCCC
JMFN019P19+           ATACAAACATTTGAGAACAAATATACATAAGTTCAACCACATATTGTGATTTACTTTCCC
JMFN004H10+           ATACAAACATTTGAGAACAAATATACATAAGTTCAACCACATATTGTGATTTACTTTCCC
                      ____________________________________________________________
consensus             ATACAAACATTTGAGAACAAATATACATAAGTTCAACCACATATTGTGATTTACTTTCCC
 
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rJMFF012G19-          CTCTACCTGATTTAGGTAGCTAGTAGCCAGTGGTGATGGACTGATGGCCTCACACTTATT
JMFN032N20+           CTCTACCTGATTTAGGTAGCTAGTAGCCAGTGGTGATGGACTGATGGCCTCACACTTATT
JMFF031P10+           CTCTACCTGATTTAGGTAGCTAGTAGCCAGTGGTGATGGACTGATGGCCTCACACTTATT
JMFF012G19+           CTCTACCTGATTTAGGTAGCTAGTAGCCAGTGGTGATGGACTGATGGCCTCACACTTATT
rJMFF031P10-          CTCTACCTGATTTAGGTAGCTAGTAGCCAGTGGTGATGGACTGATGGCCTCACACTTATT
JMFN019P19+           CTCTACCTGATTTAGGTAGCTAGTAGCCAGTGGTGATGGACTGATGGCCTCACACTTATT
JMFN004H10+           CTCTACCTGATTTAGGTAGCTAGTAGCCAGTGGTGATGGACTGATGGCCTCACACTTATT
                      ____________________________________________________________
consensus             CTCTACCTGATTTAGGTAGCTAGTAGCCAGTGGTGATGGACTGATGGCCTCACACTTATT
 
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rJMFF012G19-          TTTTTTTAAAACAGGATCGGTTACGAAAGTTCTTACACACATTTAAGTTAGGGTTCACTG
JMFN032N20+           TTTTTTTAAAACAGGATCGGTTACGAAAGTTCTTACACACATTTAAGTTAGGGTTCACTG
JMFF031P10+           TTTTTTTAAAACAGGATCGGTTACGAAAGTTCTTACACACATTTAAGTTAGGGTTCACTG
JMFF012G19+           TTTTTTTAAAACAGGATCGGTTACGAAAGTTCTTACACACATTTAAGTTAGGGTTCACTG
rJMFF031P10-          TTTTTTTAAAACAGGATCGGTTACGAAAGTTCTTACACACATTTAAGTTAGGGTTCACTG
JMFN019P19+           TTTTTTTAAAACAGGATCGGTTACGAAAGTTCTTACACACATTTAAGTTAGGGTTCACTG
JMFN004H10+           TTTTTTTAAAACAGGATCGGTTACGAAAGTTCTTACACACATTTAAGTTAGGGTTCACTG
                      ____________________________________________________________
consensus             TTTTTTTAAAACAGGATCGGTTACGAAAGTTCTTACACACATTTAAGTTAGGGTTCACTG
 
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rJMFF012G19-          CTTTCGCAAAGCAACTGCCAGATCTCGGCGCATTGCATTGCGATCCTGGCTGCAGGCTGT
JMFN032N20+           CTTTCGCAAAGCAACTGCCAGATCTCGGCGCATTGCATTGCGATCCTGGCTGCAGGCTGT
JMFF031P10+           CTTTCGCAAAGCAACTGCCAGATCTCGGCGCATTGCATTGCGATCCTGGCTGCAGGCTGT
JMFF012G19+           CTTTCGCAAAGCAACTGCCAGATCTCGGCGCATTGCATTGCGATCCTGGCTGCAGGCTGT
rJMFF031P10-          CTTTCGCAAAGCAACTGCCAGATCTCGGCGCATTGCATTGCGATCCTGGCTGCAGGCTGT
JMFN019P19+           CTTTCGCAAAGCAACTGCCAGATCTCGGCGAATTGCATTGCGATCCTGGCTGCAGGCTGT
JMFN004H10+           CTTTCGCAAAGCAACTGCCAGATCTCGGCGCATTGCATTGCGATCCTGGCTGCAGGCTGT
                      ____________________________________________________________
consensus             CTTTCGCAAAGCAACTGCCAGATCTCGGCGCATTGCATTGCGATCCTGGCTGCAGGCTGT
 
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rJMFF012G19-          TGTAGACAAGTGTTTTAGATCCGCCATCAAGAAACCAGGCAGAAGTCTGGGAATCCATCA
JMFN032N20+           TGTAGACAAGTGTTTTAGATCCGCCATCAAGAAACCAGGCAGAAGTCTGGGAATCCATCA
JMFF031P10+           TGTAGACAAGTGTTTTAGATCCGCCATCAAGAAACCAGGCAGAAGTCTGGGAATCCATCA
JMFF012G19+           TGTAGACAAGTGTTTTAGATCCGCCATCAAGAAACCAGGCAGAAGTCTGGGAATCCATCA
rJMFF031P10-          TGTAGACAAGTGTTTTAGATCCGCCATCAAGAAACCAGGCAGAAGTCTGGGAATCCATCA
JMFN019P19+           TGTAGACAAGTGTTTTAGATCCGCCATCAAGAAACCAGGCAGAAGTCTGGGAATCCATCA
JMFN004H10+           TGTAGACAAGTGTTTTAGATCCGCCATCAAGAAACCAGGCAGAAGTCTGGGAATCCATCA
                      ____________________________________________________________
consensus             TGTAGACAAGTGTTTTAGATCCGCCATCAAGAAACCAGGCAGAAGTCTGGGAATCCATCA
 
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rJMFF012G19-          TCAGGAACTCTTCGCCGCCGTCGTCTCCGGGCGCAGCAGTGCATCCGGCGGCACCACCGC
JMFN032N20+           TCAGGAACTCTTCGCCGCCGTCGTCTCCGGGCGCAGCAGTGCATCCGGCGGCACCACCGC
JMFF031P10+           TCAGGAACTCTTCGCCGCCGTCGTCTCCGGGCGCAGCAGTGCATCCGGCGGCACCACCGC
JMFF012G19+           TCAGGAACTCTTCGCCGCCGTCGTCTCCGGGCGCAGCAGTGCATCCGGCGGCACCACCGC
rJMFF031P10-          TCAGGAACTCTTCGCCGCCGTCGTCTCCGGGCGCAGCAGTGCATCCGGCGGCACCACCGC
JMFN019P19+           TCAGGAACTCTTCGCCGCCGTCGTCTCCGGGCGCAGCAGTGCATCCGGCGGCACCACCGC
JMFN004H10+           TCAGGAACTCTTCGCCGCCGTCGTCTCCGGGCGCAGCAGTGCATCCGGCGGCACCACCGC
                      ____________________________________________________________
consensus             TCAGGAACTCTTCGCCGCCGTCGTCTCCGGGCGCAGCAGTGCATCCGGCGGCACCACCGC
 
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rJMFF012G19-          AGTTTTGGCCGCCGGAGTTGCTGTTGTGGTGGTTATTAGCTGCGGCAGATTCGGCACCGG
JMFN032N20+           AGTTTTGGCCGCCGGAGTTGCTGTTGTGGTGGTTATTAGCTGCGGCAGA           
JMFF031P10+           AGTTTTGGCCGCCGGAGTTGCTGTTGTGGTGGTTATTAGCTGCGGCAGATTCGGCACCGG
JMFF012G19+           AGTTTTGGCCGCCGGAGTTGCTGTTGTGGTGGTTATTAGCTGCGGCAGATTCGGCACCGG
rJMFF031P10-          AGTTTTGGCCGCCGGAGTTGCTGTTGTGGTGGTTATTAGCTGCGGCAGATTCGGCACCGG
JMFN019P19+           AGTTTTGGCCGCCGGAGTTGCTGTTGTGGTGGTTATTAGCTGCGGCAGATTCGGCACCGG
JMFN004H10+           AGTTTTGGCCGCCGGAGTTGCTGTTGTGGTGGTTATTAGCTGCGGCAGATTCGGCACCGG
                      ____________________________________________________________
consensus             AGTTTTGGCCGCCGGAGTTGCTGTTGTGGTGGTTATTAGCTGCGGCAGATTCGGCACCGG
 
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rJMFF012G19-          TGGTGATGAACAGAGCGATGAAGATGGCTGCACTAATGTTGCAGTAACGTGCCATATTCG
JMFF031P10+           TGGTGATGAACAGAGCGATGAAGATGGCTGCACTAATGTTGCAGTAACGTGCCATATTCG
JMFF012G19+           TGGTGATGAACAGAGCGATGAAGATGGCTGCACTAATGTTGCAGTAACGTGCCATATTCG
rJMFF031P10-          TGGTGATGAACAGAGCGATGAAGATGGCTGCACTAATGTTGCAGTAACGTGCCATATTCG
JMFN019P19+           TGGTGATGAACAGAGCGATGAAGATGGCTGCACTAATGTTGCAGTAACGTGCCATATTCG
JMFN004H10+           TGGTGATGAACAGAGCGATGAAGATGGCTGCACTAATGTTGCAGTAACGTGCCATATTCG
                      ____________________________________________________________
consensus             TGGTGATGAACAGAGCGATGAAGATGGCTGCACTAATGTTGCAGTAACGTGCCATATTCG
 
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rJMFF012G19-          CTTCACTTCTACTCTTTTCGTGGGCAGAGAAAT                           
JMFF031P10+           CTTCACTTCTACTCTTTTCGTGGGCAGAGAAATGT                         
JMFF012G19+           CTTCACTTCTACTCTTTTCGTGGGCAGAGAAAT                           
rJMFF031P10-          CTTCACTTCTACTCTTTTCGTGGGCAGAGAAATGT                         
JMFN019P19+           CTTCACTTCTACTCTTTTCGTGGGCAGAGAAATGTGAGGATTGAATTTTATATAGTGCT 
JMFN004H10+           CTTCACTTCTACTCTTTTCGTGGGCAGAGAAATGTGAGGATTGAATTTTATATAGTGCTT
                      ____________________________________________________________
consensus             CTTCACTTCTACTCTTTTCGTGGGCAGAGAAATGTGAGGATTGAATTTTATATAGTGCTT
 
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JMFN004H10+           ATTATAGCATTGGGATTTCTTGCTAGTTGCTAGCTGCATATCAATGTCAAGGGGACACCC
                      ____________________________________________________________
consensus             ATTATAGCATTGGGATTTCTTGCTAGTTGCTAGCTGCATATCAATGTCAAGGGGACACCC