Contig 008906:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMCP006F03+                                         CTATTGCTTACAAAAAAAATATGAAATTGC
rJMCP003G09+                                              CTTACAAAAAAAATATGAAATTGC
JMFN003I01+                                               CTTACAAAAAAAATATGAAATTGC
                      ____________________________________________________________
consensus                                           CTATTGCTTACAAAAAAAATATGAAATTGC
 
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JMCP006F03+           ATAAACATGGGTTGAATACACTCACTCTGATCTCTCTGTTATTTGATTACAATACCAATA
rJMCP003G09+          ATAAACATGGGTTGAATACACTCACCCTGATCTCTCTGTTATTTGATTACAATACCAATA
JMFN003I01+           ATAAACATGGGTTGAATACACTCACTCTGATCTCTCTGTTATTTGATTACAATACCAATA
                      ____________________________________________________________
consensus             ATAAACATGGGTTGAATACACTCACTCTGATCTCTCTGTTATTTGATTACAATACCAATA
 
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JMCP006F03+           TGACAACAATAAATCACAAATCACAAATTCAAGACAAGAGAAATCCCTTAATTTGTCTTG
rJMCP003G09+          TGACAACAATAAATCACAAATCACAAATTCAAGACAAGAGAAATCCCTTAATTTGTCTTG
JMFN003I01+           TGACAACAATAAATCACAAATCACAAATTCAAGACAAGAGAAATCCCTTAATTTGTCTTG
                      ____________________________________________________________
consensus             TGACAACAATAAATCACAAATCACAAATTCAAGACAAGAGAAATCCCTTAATTTGTCTTG
 
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JMCP006F03+           AAGTTAAACTTAGTGTATATATATGCAATTAATAAGTTAGTTAGCCGATGAGGGAAAGGC
rJMCP003G09+          AAGTTAAACTTAGTGTATATATATGCAATTAATAAGTTAATTAGCCGATGAGGGAAAGGC
JMFN003I01+           AAGTTAAACTTAGTGTATATATATGCAATTAATAAGTTAATTAGCCGATGAGGGAAAGGC
                      ____________________________________________________________
consensus             AAGTTAAACTTAGTGTATATATATGCAATTAATAAGTTAATTAGCCGATGAGGGAAAGGC
 
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JMCP006F03+           CGGCGGCAAGTAAGTCATCAGACAAAACTTGGTTGGCTGCCTCTGTGGGATGAAACCCAT
rJMCP003G09+          CGGCGGCAAGCAAGTCATCAGACAAAACTTGGTTGGCTGCCTCTGTGGGATGAAACCCAT
JMFN003I01+           CGGCGGCAAGCAAGTCATCAGACAAAACTTGGTTGGCTGCCTCTGTGGGATGAAACCCAT
                      ____________________________________________________________
consensus             CGGCGGCAAGCAAGTCATCAGACAAAACTTGGTTGGCTGCCTCTGTGGGATGAAACCCAT
 
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JMCP006F03+           CCCAGAAAACATACTCCGTCGCGTTTTTACACGTCCCCGGAG                  
rJMCP003G09+          CCCAGAAAACATACTCCGTCGCGTTTTTACACGTCCCCGGAG                  
JMFN003I01+           CCCAGAAAACATACTCCGTCGCGTTTTTACACGTCCCCGGAGACTCTGCGTTGCACAGAA
                      ____________________________________________________________
consensus             CCCAGAAAACATACTCCGTCGCGTTTTTACACGTCCCCGGAGACTCTGCGTTGCACAGAA
 
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JMFN003I01+           AAGATGTCTCCACCAGCCCTGTGCCACAACATGCCCTTCTTGCTTCAAAGAACCCGTGAT
                      ____________________________________________________________
consensus             AAGATGTCTCCACCAGCCCTGTGCCACAACATGCCCTTCTTGCTTCAAAGAACCCGTGAT
 
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JMFN003I01+           CAGTTGGATGGGTGACAAGGTCAAGGAGGGGCTGGTATATGTCGAGGACGACGAGATTGA
                      ____________________________________________________________
consensus             CAGTTGGATGGGTGACAAGGTCAAGGAGGGGCTGGTATATGTCGAGGACGACGAGATTGA
 
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JMFN003I01+           GGCCGGAGAGCTTCTGCTGCAACTTGAGAGAGGTAGCGTTGAGCTTCCTGTTGAAATAAA
                      ____________________________________________________________
consensus             GGCCGGAGAGCTTCTGCTGCAACTTGAGAGAGGTAGCGTTGAGCTTCCTGTTGAAATAAA
 
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JMFN003I01+           TGGCTGCTTTGTTCAACTTTTCCACACACTTATTGCTGCCTTCACCACCAAAGATTGTAA
                      ____________________________________________________________
consensus             TGGCTGCTTTGTTCAACTTTTCCACACACTTATTGCTGCCTTCACCACCAAAGATTGTAA
 
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JMFN003I01+           TGGCGGCCGGTACACATCCAATTGGTGGCAGTGTTGTCACCCCAATCTTCCTTGCTCCCA
                      ____________________________________________________________
consensus             TGGCGGCCGGTACACATCCAATTGGTGGCAGTGTTGTCACCCCAATCTTCCTTGCTCCCA