| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF027O08 | Sequence | 639 | 008904 (13) | emb|CDP02330.1| | 3e-27 | unnamed protein product [Coffea canephora] | 613 | 008904 (13) | emb|CDP02330.1| | 2e-27 | unnamed protein product [Coffea canephora] |
| JMFN001B04 | Sequence | 568 | 008904 (13) | emb|CDP02330.1| | 2e-27 | unnamed protein product [Coffea canephora] | |||||
| JMFN004K07 | Sequence | 556 | 008904 (13) | ref|XP_004232154.1| | 2e-22 | PREDICTED: protein SPIRAL1-like 1 [Solanum lycopersicum] | |||||
| JMFN005B05 | Sequence | 612 | 008904 (13) | emb|CDP02330.1| | 2e-27 | unnamed protein product [Coffea canephora] | |||||
| JMFN011C14 | Sequence | 522 | 008904 (13) | ref|XP_004232154.1| | 3e-19 | PREDICTED: protein SPIRAL1-like 1 [Solanum lycopersicum] | |||||
| JMFN013F04 | Sequence | 532 | 008904 (13) | emb|CDP02330.1| | 1e-27 | unnamed protein product [Coffea canephora] | |||||
| JMFN028A23 | Sequence | 207 | 008904 (13) | emb|CDP02330.1| | 7e-09 | unnamed protein product [Coffea canephora] | |||||
| JMFN028E17 | Sequence | 543 | 008904 (13) | emb|CDP02330.1| | 1e-27 | unnamed protein product [Coffea canephora] | |||||
| JMFN028H15 | Sequence | 579 | 008904 (13) | emb|CDP02330.1| | 2e-27 | unnamed protein product [Coffea canephora] | |||||
| JMFN038D05 | Sequence | 561 | 008904 (13) | emb|CDP02330.1| | 1e-27 | unnamed protein product [Coffea canephora] | |||||
| JMFN038J12 | Sequence | 567 | 008904 (13) | emb|CDP02330.1| | 2e-27 | unnamed protein product [Coffea canephora] | |||||
| JMFN046M12 | Sequence | 596 | 008904 (13) | emb|CDP02330.1| | 2e-27 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN046M12- AAA
____________________________________________________________
consensus AAA
. : . : . : . : . : . :
JMFN038D05+ GATTCCAAGCAGATTTGCATAGAATGCCAAGAAGGAACATGTTCCATCAATGACAATGTA
JMFN028E17+ AAGCAGATTTGCATAGAATGCCAAGAAGGAACATGTTCCATCAATGACAATGTA
JMFN013F04+ GCATAGAATGCCAAGAAGGAACATGTTCCATCAATGACAATGTA
rJMFF027O08- AGATTTGCATAGAATGCCAAGAAGGAACATGTTCCATCAATGACAATGTA
JMFN028H15+ GATTCCAAGCAGATTTGCATAGAATGCCAAGAAGGAACATGTTCCATCAATGACAATGTA
JMFN038J12+ GAATGCCAAGAAGGAACATGTTCCATCAATGACAATGTA
JMFN046M12- GATTCCAAGCAGATTTGCATAGAATGCCAAGAAGGAACATGTTCCATCAATGACAATGTA
JMFN001B04+ AGGAACATGTTCCATCAATGACAATGTA
____________________________________________________________
consensus GATTCCAAGCAGATTTGCATAGAATGCCAAGAAGGAACATGTTCCATCAATGACAATGTA
. : . : . : . : . : . :
JMFN038D05+ TCAAATACATTTTGGATAGCATTTCTAATCTTCTCACAGTTTTTAGGCAATGACAAAATG
JMFN028E17+ TCAAATACATTTTGGATAGCATTTCTAATCTTCTCACAGTTTTTAGGCAATGACAAAATG
JMFN013F04+ TCAAATACATTTTGGATAGCATTTCTAATCTTCTCACAGTTTTTAGGCAATGACAAAATG
rJMFF027O08- TCAAATACATTTTGGATAGCATTTCTAATCTTCTCACAGTTTTTAGGCAATGACAAAATG
JMFN028H15+ TCAAATACATTTTGGATAGCATTTCTAATCTTCTCACAGTTTTTAGGCAATGACAAAATG
JMFN038J12+ TCAAATACATTTTGGATAGCATTTCTAATCTTCTCACAGTTTTTAGGCAATGACAAAATG
JMFN046M12- TCAAATACATTTTGGATAGCATTTCTAATCTTCTCACAGTTTTTAGGCAATGACAAAATG
JMFN001B04+ TCAAATACATTTTGGATAGCATTTCTAATCTTCTCACAGTTTTTAGGCAATGACAAAATG
____________________________________________________________
consensus TCAAATACATTTTGGATAGCATTTCTAATCTTCTCACAGTTTTTAGGCAATGACAAAATG
. : . : . : . : . : . :
JMFN038D05+ TATCAAATACAACTCCAAATGAACAATATCAAATTTACTCTTAAGTTCAGATATTTAGGA
JMFN028E17+ TATCAAATACAACTCCAAATGAACAATATCAAATTTACTCTTAAGTTCAGATATTTAGGA
JMFN013F04+ TATCAAATACAACTCCAAATGAACAATATCAAATTTACTCTTAAGTTCAGATATTTAGGA
rJMFF027O08- TATCAAATACAACTCCAAATGAACAATATCAAATTTACTCTTAAGTTCAGATATTTAGGA
JMFN028H15+ TATCAAATACAACTCCAAATGAACAATATCAAATTTACTCTTAAGTTCAGATATTTAGGA
JMFN038J12+ TATCAAATACAACTCCAAATGAACAATATCAAATTTACTCTTAAGTTCAGATATTTAGGA
JMFN046M12- TATCAAATACAACTCCAAATGAACAATATCAAATTTACTCTTAAGTTCAGATATTTAGGA
JMFN001B04+ TATCAAATACAACTCCAAATGAACAATATCAAATTTACTCTTAAGTTCAGATATTTAGGA
____________________________________________________________
consensus TATCAAATACAACTCCAAATGAACAATATCAAATTTACTCTTAAGTTCAGATATTTAGGA
. : . : . : . : . : . :
JMFN038D05+ CATTTATATTCTGGAAAGCTGCAGCGCAGCTTGAGGGCATCAATTGCTTCCACCACCAAA
JMFN028E17+ CATTTATATTCTGGAAAGCTGCAGCGCAGCTTGAGGGCATCAATTGCTTCCACCACCAAA
JMFN013F04+ CATTTATATTCTGGAAAGCTGCAGCGCAGCTTGAGGGCATCAATTGCTTCCACCACCAAA
rJMFF027O08- CATTTATATTCTGGAAAGCTGCAGCGCAGCTTGAGGGCATCAATTGCTTCCACCACCAAA
JMFN028H15+ CATTTATATTCTGGAAAGCTGCAGCGCAGCTTGAGGGCATCAATTGCTTCCACCACCAAA
JMFN038J12+ CATTTATATTCTGGAAAGCTGCAGCGCAGCTTGAGGGCATCAATTGCTTCCACCACCAAA
JMFN005B05+ TGCTTCCACCACCAAA
JMFF027O08+ TGCTTCCACCACCAAA
JMFN004K07+ TGCTTCCACCTCCAAA
JMFN011C14+ TGCTTCCACCTCCAAA
JMFN046M12- CATTTATATTCTGGAAAGCTGCAGCGCAGCTTGAGGGCATCAATTGCTTCCACCACCAAA
JMFN001B04+ CATTTATATTCTGGAAAGCTGCAGCGCAGCTTGAGGGCATCAATTGCTTCCACCACCAAA
____________________________________________________________
consensus CATTTATATTCTGGAAAGCTGCAGCGCAGCTTGAGGGCATCAATTGCTTCCACCACCAAA
. : . : . : . : . : . :
JMFN038D05+ TAGATAACCTAGTGAAGAGCCACCGCCAGGTGCAGCTTGAACCTTGGTCGAGCGCCTTTC
JMFN028E17+ TAGATAACCTAGTGAAGAGCCACCGCCAGGTGCAGCTTGAACCTTGGTCGAGCGCCTTTC
JMFN013F04+ TAGATAACCTAGTGAAGAGCCACCGCCAGGTGCAGCTTGAACCTTGGTCGAGCGCCTTTC
rJMFF027O08- TAGATAACCTAGTGAAGAGCCACCGCCAGGTGCAGCTTGAACCTTGGTCGAGCGCCTTTC
JMFN028H15+ TAGATAACCTAGTGAAGAGCCACCGCCAGGTGCAGCTTGAACCTTGGTCGAGCGCCTTTC
JMFN038J12+ TAGATAACCTAGTGAAGAGCCACCGCCAGGTGCAGCTTGAACCTTGGTCGAGCGCCTTTC
JMFN005B05+ TAGATAACCTAGTGAAGAGCCACCGCCAGGTGCAGCTTGAACCTTGGTCGAGCGCCTTTC
JMFF027O08+ TAGATAACCTAGTGAAGAGCCACCGCCAGGTGCAGCTTGAACCTTGGTCGAGCGCCTTTC
JMFN004K07+ CAGATAACCCAGGGAAGAGCCGCCGCCAGGTGCAGCTTGGACTTTCGTCGAACGCCTTTC
JMFN011C14+ CAGATAACCCAGGGAAGAGCCGCCGCCAGGTGCAGCTTGGACTTTCGTCGAACGCCTTTC
JMFN046M12- TAGATAACCTAGTGAAGAGCCACCGCCAGGTGCAGCTTGAACCTTGGTCGAGCGCCTTTC
JMFN001B04+ TAGATAACCTAGTGAAGAGCCACCGCCAGGTGCAGCTTGAACCTTGGTCGAGCGCCTTTC
____________________________________________________________
consensus TAGATAACCTAGTGAAGAGCCACCGCCAGGTGCAGCTTGAACCTTGGTCGAGCGCCTTTC
. : . : . : . : . : . :
JMFN038D05+ CGTAAGAAAGTTGCCACAGTTCTGACCATCTGCACGAACATAGTTGTTTGCGTTGCTGCT
JMFN028E17+ CGTAAGAAAGTTGCCACAGTTCTGACCATCTGCACGAACATAGTTGTTTGCGTTGCTGCT
JMFN013F04+ CGTAAGAAAGTTGCCACAGTTCTGACCATCTGCACGAACATAGTTGTTTGCGTTGCTGCT
rJMFF027O08- CGTAAGAAAGTTGCCACAGTTCTGACCATCTGCACGAACATAGTTGTTTGCGTTGCTGCT
JMFN028H15+ CGTAAGAAAGTTGCCACAGTTCTGACCATCTGCACGAACATAGTTGTTTGCGTTGCTGCT
JMFN038J12+ CGTAAGAAAGTTGCCACAGTTCTGACCATCTGCACGAACATAGTTGTTTGCGTTGCTGCT
JMFN005B05+ CGTAAGAAAGTTGCCACAGTTCTGACCATCTGCACGAACATAGTTGTTTGCGTTGCTGCT
JMFF027O08+ CGTAAGAAAGTTGCCACAGTTCTGACCATCTGCACGAACATAGTTGTTTGCGTTGCTGCT
JMFN004K07+ CGTTAGAAAGTTGCCACAGTTCTGACCATCTCCACGGACATAGTTGTTTGCGTTACTGCT
JMFN011C14+ CGTTAGAAAGTTGCCACAGTTCTGACCATCTCCACGGACATAGTTGTTTGCGTTACTGCT
JMFN046M12- CGTAAGAAAGTTGCCACAGTTCTGACCATCTGCACGAACATAGTTGTTTGCGTTGCTGCT
JMFN001B04+ CGTAAGAAAGTTGCCACAGTTCTGACCATCTGCACGAACATAGTTGTTTGCGTTGCTGCT
____________________________________________________________
consensus CGTAAGAAAGTTGCCACAGTTCTGACCATCTGCACGAACATAGTTGTTTGCGTTGCTGCT
. : . : . : . : . : . :
JMFN038D05+ GAGGATTCCTGCAGGAGCTTGCTTAGTGTTATCCGCAGGGGGTGCAGCAACGGGCTTTGG
JMFN028E17+ GAGGATTCCTGCAGGAGCTTGCTTAGTGTTATCCGCAGGGGGTGCAGCAACGGGCTTTGG
JMFN013F04+ GAGGATTCCTGCAGGAGCTTGCTTAGTGTTATCCGCAGGGGGTGCAGCAACGGGCTTTGG
rJMFF027O08- GAGGATTCCTGCAGGAGCTTGCTTA
JMFN028A23+ AGGATTCCTGCAGGAGCTTGCTTAGTGTTATCCGCAGGGGGTGCAGCAACGGGCTTTGG
JMFN028H15+ GAGGATTCCTGCAGGAGCTTGCTTAGTGTTATCCGCAGGGGGTGCAGCAACGGGCTTTGG
JMFN038J12+ GAGGATTCCTGCAGGAGCTTGCTTAGTGTTATCCGCAGGGGGTGCAGCAACGGGCTTTGG
JMFN005B05+ GAGGATTCCTGCAGGAGCTTGCTTAGTGTTATCCGCAGGGGGTGCAGCAACGGGCTTTGG
JMFF027O08+ GAGGATTCCTGCAGGAGCTTGCTTA
JMFN004K07+ GAGAATGCC
JMFN011C14+ GAGAATGCC
JMFN046M12- GAGGATTCCTGCAGGAGCTTGCTTAGTGTTATCCGCAGGGGGTGCAGCAACGGGCTTTGG
JMFN001B04+ GAGGATTCCTGCAGGAGCTTGCTTAGTGTTATCCGCAGGGGGTGCAGCAACGGGCTTTGG
____________________________________________________________
consensus GAGGATTCCTGCAGGAGCTTGCTTAGTGTTATCCGCAGGGGGTGCAGCAACGGGCTTTGG
. : . : . : . : . : . :
JMFN038D05+ AGCAGGTGCATTATTGGGAACCTTTTCCGGGTTCTGAACAGCTGGTGGATTGCTAGGTGC
JMFN028E17+ AGCAGGTGCATTATTGGGAACCTTTTCCGGGTTCTGAACAGCTGGTGGATTGCTAGGTGC
JMFN013F04+ AGCAGGTGCATTATTGGGAACCTTTTCCGGGTTCTGAACAGCTGGTGGATTGCTAGGTGC
JMFN028A23+ AGCAGGTGCATTATTGGGAACCTTTTCCGGGTTCTGAACAGCTGGTGGATTGTTAGGTGC
JMFN028H15+ AGCAGGTGCATTATTGGGAACCTTTTCCGGGTTCTGAACAGCTGGTGGATTGCTAGGTGC
JMFN038J12+ AGCAGGTGCATTATTGGGAACCTTTTCCGGGTTCTGAACAGCTGGTGGATTGCTAGGTGC
JMFN005B05+ AGCAGGTGCATTATTGGGAACCTTTTCCGGGTTCTGAACAGCTGGTGGATTGCTAGGTGC
JMFN046M12- AGCAGGTGCATTATTGGGAACCTTTTCCGGGTTCTGAACAGCTGGTGGATTGCTAGGTGC
JMFN001B04+ AGCAGGTGCATTATTGGGAACCTTTTCCGGGTTCTGAACAGCTGGTGGATTGCTAGGTGC
____________________________________________________________
consensus AGCAGGTGCATTATTGGGAACCTTTTCCGGGTTCTGAACAGCTGGTGGATTGCTAGGTGC
. : . : . : . : . : . :
JMFN038D05+ CTCTCCACCTCCAAACAGGTAGCCCAAAGAACTCTGCCCACCACCAGCACTAACTCCACG
JMFN028E17+ CTCTCCACCTCCAAACAGGTAGCCCAAAGAACTCTGCCCACCACCAGCACTAACTCCACG
JMFN013F04+ CTCTCCACCTCCAAACAGGTAGCCCAAAGAACTCTGCCCACCACCAGCACTAACTCCACG
JMFN028A23+ CTCTCCACCTCCAAACAGGTAGCCCAAAGAACTCTGCCCACCACCAGCACTAACTCCACG
JMFN028H15+ CTCTCCACCTCCAAACAGGTAGCCCAAAGAACTCTGCCCACCACCAGCACTAACTCCACG
JMFN038J12+ CTCTCCACCTCCAAACAGGTAGCCCAAAGAACTCTGCCCACCACCAGCACTAACTCCACG
JMFN005B05+ CTCTCCACCTCCAAACAGGTAGCCCAAAGAACTCTGCCCACCACCAGCACTAACTCCACG
JMFN046M12- CTCTCCACCTCCAAACAGGTAGCCCAAAGAACTCTGCCCACCACCAGCACTAACTCCACG
JMFN001B04+ CTCTCCACCTCCAAACAGGTAGCCCAAAGAACTCTGCCCACCACCAGCACTAACTCCACG
____________________________________________________________
consensus CTCTCCACCTCCAAACAGGTAGCCCAAAGAACTCTGCCCACCACCAGCACTAACTCCACG
. : . : . : . : . : . :
JMFN038D05+ ACCCATCCTCTACTCTCGAAT
JMFN028E17+ ACCCATCCT
JMFN013F04+ ACCCATCC
JMFN028A23+ ACCCATCCTCTACTCTCGAATTATCAAC
JMFN028H15+ ACCCATCCTCTACTCTCGAATTATCAACACGAACCTGAG
JMFN038J12+ ACCCATCCTCTACTCTCGAATTATCAACACGAACCTGAGTACTTTCGT
JMFN005B05+ ACCCATCCTCTACTCTCGAATTATCAACACGAACCTGAGTACTTTCGTTGGT
JMFN046M12- ACCCATCCTCTACTCTCGAATTATCAACACGAACCTGAGTACTTTCGTTGGTA
JMFN001B04+ ACCCATCCTCTACTCTCGAATTATCAACACGAACCTGAGTACTTTCGTTGGTATGGTAAG
____________________________________________________________
consensus ACCCATCCTCTACTCTCGAATTATCAACACGAACCTGAGTACTTTCGTTGGTATGGTAAG