Contig 008901:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006C20Sequence463008901 (3)ref|XP_009603537.1|73.2PREDICTED: uncharacterized protein LOC104098494 [Nicotiana tomentosiformis]742002738 (3)ref|XP_004250001.1|263PREDICTED: uncharacterized protein LOC101253339 [Solanum lycopersicum]
JMFF049O20Sequence640008901 (3)ref|XP_009793129.1|172PREDICTED: uncharacterized protein LOC104240043 [Nicotiana sylvestris]573002738 (3)ref|XP_009793129.1|191PREDICTED: uncharacterized protein LOC104240043 [Nicotiana sylvestris]
JMFF051G02Sequence544008901 (3)ref|XP_009793129.1|114PREDICTED: uncharacterized protein LOC104240043 [Nicotiana sylvestris]434002738 (3)ref|XP_009793129.1|108PREDICTED: uncharacterized protein LOC104240043 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF049O20+                                                                    CGC
                      ____________________________________________________________
consensus                                                                      CGC
 
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JMFF049O20+           GGCGTCGGAGTTAACCTCGGAGAGATCGAAGAGGGGCGGCGCGGCCAAGCAGGGGCAGAC
                      ____________________________________________________________
consensus             GGCGTCGGAGTTAACCTCGGAGAGATCGAAGAGGGGCGGCGCGGCCAAGCAGGGGCAGAC
 
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JMFF049O20+           GCCGAAGAGGAGCCAAGCGGAGTCAGCGTTGTGGAGCCACCGAGCCGGCCTGGCGTCCCA
JMFF051G02+                                                                  TCCCA
                      ____________________________________________________________
consensus             GCCGAAGAGGAGCCAAGCGGAGTCAGCGTTGTGGAGCCACCGAGCCGGCCTGGCGTCCCA
 
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JMFF049O20+           CGCCGCATTCCAAGACCCCTCGCCGCCCTTCTTCGTCAGCTCGCAATTGTGGCGGTGGAA
JMFF051G02+           CGCCGCATTCCAAGACCCCTCGCCGCCCTTCTTCGTCAGCTCGCAATTGTGGCGGTGGAA
                      ____________________________________________________________
consensus             CGCCGCATTCCAAGACCCCTCGCCGCCCTTCTTCGTCAGCTCGCAATTGTGGCGGTGGAA
 
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JMFF049O20+           CACCGCCGCCCTACTACTCGACATACTCTTCCGGCCGCGGGCGGGGAGAATCGCGTGCCA
JMFF006C20+                              GACATACTCTTCCGACCGCGGGCGGGGAGAATCGCGTGCCA
JMFF051G02+           CACCGCCGCCCTACTACTCGACATACTCTTCCGACCGCGGGCGGGGAGAATCGCGTGCCA
                      ____________________________________________________________
consensus             CACCGCCGCCCTACTACTCGACATACTCTTCCGACCGCGGGCGGGGAGAATCGCGTGCCA
 
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JMFF049O20+           TATCGACGCGGCGCCACCTTCGCGCTCGGCGCCGCCGCCGAA-TCTGCAACTCGTGGAGT
JMFF006C20+           TATCGACGCGGCGCCACCTTCGCGCTCGGCGCCGCCGCCGAATTCTGCAACTCGTGGAGT
JMFF051G02+           TATCGACGCGGCGCCACCTTCGCGCTCGGCGCCGCCGCCGAA-TCTGCAACTCGTGGAGT
                      ____________________________________________________________
consensus             TATCGACGCGGCGCCACCTTCGCGCTCGGCGCCGCCGCCGAA-TCTGCAACTCGTGGAGT
 
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JMFF049O20+           GGTGCAGCCGCCGCTGATCGTCCCCCTCCGCCACCAAGACCGATCGGATTGGACTCGCCG
JMFF006C20+           GGTGCAGCCGCCGCTGATCGTCCCCCTCCGCCACCAAGACCGATCGGATTGGACTCGCCG
JMFF051G02+           GGTGCAGCCGCCGCTGATCGTCCCCCTCCGCCACCAAGACCGATCGGATTGGACTCGCCG
                      ____________________________________________________________
consensus             GGTGCAGCCGCCGCTGATCGTCCCCCTCCGCCACCAAGACCGATCGGATTGGACTCGCCG
 
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JMFF049O20+           CCAGCCGATGGTGCGCCGCCGCCGTCAAGCCGTGCGCATGGAACGAGAACAGCGACGCTA
JMFF006C20+           CCAGCCGATGGTGCGCCGCCGCCGTCAAGCCGTGCGCATGGAACGAGAACAGCGACGCTA
JMFF051G02+           CCAGCCGATGGTGCGCCGCCGCCGTCAAGCCGTGCGCATGGAACGAGAACAGCGACGCTA
                      ____________________________________________________________
consensus             CCAGCCGATGGTGCGCCGCCGCCGTCAAGCCGTGCGCATGGAACGAGAACAGCGACGCTA
 
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JMFF049O20+           ACAGCCACGGCTTGGGACGTGCACACAGTACGCCGAGCATCACCGACGACGCTAATCACC
JMFF006C20+           ACAGCCACGGCTTGGGACGTGCACACAGTACGCCGAGCATCACCGACGACGCTAATCACC
JMFF051G02+           ACAGCCACGGCTTGGGACGTGCACACAGTACGCCGAGCATCACCGACGACGCTAATCACC
                      ____________________________________________________________
consensus             ACAGCCACGGCTTGGGACGTGCACACAGTACGCCGAGCATCACCGACGACGCTAATCACC
 
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JMFF049O20+           GGAAAAAATTCCAAAAAAGAAACAAAAAACCCTTTCAACTCGGAGTAGCCATTATAAGGG
JMFF006C20+           GGAAAAAATTCCAAAAAAGAAACAAAAAACCCTTTCAACTCGGAGTAGCCATTATAAGGG
JMFF051G02+           GGAAAAAATTCCAAAAAAGAAACAAAAAACCCTTTCAACTCGGAGTAGCCATTATAAGGG
                      ____________________________________________________________
consensus             GGAAAAAATTCCAAAAAAGAAACAAAAAACCCTTTCAACTCGGAGTAGCCATTATAAGGG
 
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JMFF049O20+           AGAAGAAGAAGAGGAATTAGAGATCAAAAATTCCAATTTTTCTTTTTTTTGTTGTGAGAG
JMFF006C20+           AGAAGAAGAAGAGGAATTAGAGATCAAAAATTCCAATTTTTCTTTTTTTTGTTGTGAGAG
JMFF051G02+           AGAAGAAGAAGAGGAATTAGAGATCAAAAATTCCAATTTTTCTTTTTTTTGTTGTGAGAG
                      ____________________________________________________________
consensus             AGAAGAAGAAGAGGAATTAGAGATCAAAAATTCCAATTTTTCTTTTTTTTGTTGTGAGAG
 
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JMFF049O20+           AAAATTGAAGAAATGAGAGAGTGAAATGTGGTCGGC                        
JMFF006C20+           AAAATTGAAGAAATGAGAGAGTGAAATGTGGTCGGCTTGAACGGCTGCTCAGGATGGCAC
JMFF051G02+           AAAATTGAAGAAATGAGAGAGTGAAATGTGGTCGGCTTGAACGGCTGCTCAGGATGGCAC
                      ____________________________________________________________
consensus             AAAATTGAAGAAATGAGAGAGTGAAATGTGGTCGGCTTGAACGGCTGCTCAGGATGGCAC