Contig 008897:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046D17Sequence537008897 (2)493008355 (3)gb|ABC68428.1|2e-09putative protein phosphatase 2C [Tragopogon pratensis] gb|ADE06483.1| putative p
JMFF050L18Sequence636008897 (2)597008355 (3)emb|CBI28905.3|4e-28unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFF050L18+                                   GCAAAATCCAATGATCCAATCCACTTCAACTTCAAA
                      ____________________________________________________________
consensus                                     GCAAAATCCAATGATCCAATCCACTTCAACTTCAAA
 
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JMFF050L18+           AGCAATCTAATCCAATCCACTTCAACTTCAAAAGCACTCTAATCCAATCCACTTCAACTT
                      ____________________________________________________________
consensus             AGCAATCTAATCCAATCCACTTCAACTTCAAAAGCACTCTAATCCAATCCACTTCAACTT
 
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JMFF046D17+                   ATCAAATCCAATCCACTTCACTTTCAAAAGCACTCTAATCCAATCCACTTTT
JMFF050L18+           CACAAGCAATCAAATCCAATCCACTTCAACTTCAAAAGCACTCTAATCCAATCCACTTTT
                      ____________________________________________________________
consensus             CACAAGCAATCAAATCCAATCCACTTCACTTTCAAAAGCACTCTAATCCAATCCACTTTT
 
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JMFF046D17+           CAACTTCAAAAGCACTCTAATCCAAATATCCAATCCCCTCAAATCATTTCAGCTTCAAAA
JMFF050L18+           CAACTTCAAAAGCACTCTAATCCAAATATCCAATCCCCTCAAATCATTTCAGCTTCAAAA
                      ____________________________________________________________
consensus             CAACTTCAAAAGCACTCTAATCCAAATATCCAATCCCCTCAAATCATTTCAGCTTCAAAA
 
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JMFF046D17+           AGCAATGAACTTTCGAAGAAAACAAACAGGAAACATCAACTCAATCCTATATTTAATAAC
JMFF050L18+           AGCAATGAACTTTCGAAGAAAACAAACAGGAAACATCAACTCAATCCTATATTTAATAAC
                      ____________________________________________________________
consensus             AGCAATGAACTTTCGAAGAAAACAAACAGGAAACATCAACTCAATCCTATATTTAATAAC
 
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JMFF046D17+           TAAAACAACTATATGACAATGATATAAACATAATACTTATAACCAACAAGAACAAAGTCA
JMFF050L18+           TAAAACAACTATATGACAATGATATAAACATAATACTTATAACCAACAAGAACAAAGTCA
                      ____________________________________________________________
consensus             TAAAACAACTATATGACAATGATATAAACATAATACTTATAACCAACAAGAACAAAGTCA
 
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JMFF046D17+           CCCACTAGCTTTTTGTCCTTATTCTGCTCTTTTCCCGAAATGATTATACGACCGGAGAAA
JMFF050L18+           CCCACTAGCTTTTTGTCCTTATTCTGCTCTTTTCCCGAAATGATTATACGACCGGAGAAA
                      ____________________________________________________________
consensus             CCCACTAGCTTTTTGTCCTTATTCTGCTCTTTTCCCGAAATGATTATACGACCGGAGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046D17+           GCTAAAAGTGGGAGAAAGCCTACAGAACAGATCTATAAAGCAGTGCTTTCTGAAAATTTC
JMFF050L18+           GCTAAAAGTGGGAGAAAGCCTACAGAACAGATCTATAAAGCAGTGCTTTCTGAAAATTTC
                      ____________________________________________________________
consensus             GCTAAAAGTGGGAGAAAGCCTACAGAACAGATCTATAAAGCAGTGCTTTCTGAAAATTTC
 
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JMFF046D17+           TTTAATAGTATCAATCAAATCAGTACCTTTCTCTCTCCCTCCCTCAAACTAGGAATTCAA
JMFF050L18+           TTTAATAGTATCAATCAAATCAGTACCTTTCTCTCTCCCTCCCTCAAACTAGGAATTCAA
                      ____________________________________________________________
consensus             TTTAATAGTATCAATCAAATCAGTACCTTTCTCTCTCCCTCCCTCAAACTAGGAATTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046D17+           GACATGAAACATCGAAACCTTGAGACCGCCACCATCGATGAAATACCCCTTCTCCGGTCG
JMFF050L18+           GACATGAAACATCGAAACCTTGAGACCGCCACCATCGATGAAATACCCCTTCTCCGGTCG
                      ____________________________________________________________
consensus             GACATGAAACATCGAAACCTTGAGACCGCCACCATCGATGAAATACCCCTTCTCCGGTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046D17+           AATCCAATCAATGCTAAACAAATAAGTAATGCCCAGAGTTGACAAATAATGGGGGAAACC
JMFF050L18+           AATCCAATCAATGCTAAACAAATAAGTAATGCCCAGAGTTGACAAATAATGGGGGAAACC
                      ____________________________________________________________
consensus             AATCCAATCAATGCTAAACAAATAAGTAATGCCCAGAGTTGACAAATAATGGGGGAAACC