Contig 008880:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047D01Sequence634008880 (2)ref|XP_006394793.1|4e-33hypothetical protein EUTSA_v10004860mg [Eutrema salsugineum] gb|ESQ32079.1| hypo450008880 (2)

Alignment

This contig is upended


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rJMFF047D01-            GAGCAAGATTCTTATACATACTAAAAAGTCCGAATCGATTTTTGTCATTATCTTCTTG
                      ____________________________________________________________
consensus               GAGCAAGATTCTTATACATACTAAAAAGTCCGAATCGATTTTTGTCATTATCTTCTTG
 
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rJMFF047D01-          GGCAACCCCATCATGCAAGGGCTTTCTAATGCGGTTTACCTTGCCGAGGGTTAATCATGG
                      ____________________________________________________________
consensus             GGCAACCCCATCATGCAAGGGCTTTCTAATGCGGTTTACCTTGCCGAGGGTTAATCATGG
 
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rJMFF047D01-          CAATAACACAAACTTTTTTGATGGCTAATCCTTTATGTGCAATTGAAGGAAATCCCAAGA
                      ____________________________________________________________
consensus             CAATAACACAAACTTTTTTGATGGCTAATCCTTTATGTGCAATTGAAGGAAATCCCAAGA
 
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rJMFF047D01-          GCTACCAGTGCATGTAAAAAGCATGGATTCTTGCTTCATATAAAAGCAAAAAACATCCCA
                      ____________________________________________________________
consensus             GCTACCAGTGCATGTAAAAAGCATGGATTCTTGCTTCATATAAAAGCAAAAAACATCCCA
 
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rJMFF047D01-          AGCAACAATAAACAACTTCAACAAAGGCCAATAATGACAATAACTAATCCTCACTTCAAA
                      ____________________________________________________________
consensus             AGCAACAATAAACAACTTCAACAAAGGCCAATAATGACAATAACTAATCCTCACTTCAAA
 
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rJMFF047D01-          CTATCACTGTTCTTGAACTCTGCAAAGAAACATCAGACATGTCATCATACTTTCACCTCT
JMFF047D01+                                         CATCAGACATGTCATCATACTTTCACCTCT
                      ____________________________________________________________
consensus             CTATCACTGTTCTTGAACTCTGCAAAGAAACATCAGACATGTCATCATACTTTCACCTCT
 
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rJMFF047D01-          CAAATCCTTCACAAAGTCTCCTTGACAGTAAACTATTTCCTCCCTTCCTGGCTGCCAACA
JMFF047D01+           CAAATCTTTCACAAAGTCTCGGTGACAGTAAGCTATTTCCTCCCTTCCTGGCTGCCAGCA
                      ____________________________________________________________
consensus             CAAATCTTTCACAAAGTCTCGTTGACAGTAAGCTATTTCCTCCCTTCCTGGCTGCCAGCA
 
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rJMFF047D01-          ATGGTGTTCTTCAGAATATGTCTTAACATCTG                            
JMFF047D01+           GTGGTGTTCTTCAGAATATGTCTTAGCATCTGGTTTTCATTTTGCAAGGTGGACAGCCTC
                      ____________________________________________________________
consensus             GTGGTGTTCTTCAGAATATGTCTTAGCATCTGGTTTTCATTTTGCAAGGTGGACAGCCTC
 
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JMFF047D01+           TCTTCAAGCTCAGCATTCTTTGTTTCCAAGTCTTTCACCCTTCCCTCCAAGTCTATCAAA
                      ____________________________________________________________
consensus             TCTTCAAGCTCAGCATTCTTTGTTTCCAAGTCTTTCACCCTTCCCTCCAAGTCTATCAAA
 
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JMFF047D01+           TATGCCTTCTTCCTCTCCCTTGCTTGCTGTGCTGAAACTCTGTTCCTCAGAGCAACCTTT
                      ____________________________________________________________
consensus             TATGCCTTCTTCCTCTCCCTTGCTTGCTGTGCTGAAACTCTGTTCCTCAGAGCAACCTTT
 
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JMFF047D01+           TTAACCTCTTGTTCTCTTTGTCAGCTGGGCTTCTGCCCCTCTTCCTTTGAGTGGCGGCGG
                      ____________________________________________________________
consensus             TTAACCTCTTGTTCTCTTTGTCAGCTGGGCTTCTGCCCCTCTTCCTTTGAGTGGCGGCGG
 
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JMFF047D01+           AATGGTGAACGGGACCCGCCGCAGAGGTGCCATCCCGGCCTGAAGCAGCCGGACCGGCGG
                      ____________________________________________________________
consensus             AATGGTGAACGGGACCCGCCGCAGAGGTGCCATCCCGGCCTGAAGCAGCCGGACCGGCGG
 
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JMFF047D01+           CTTCTCCACCCATCTCAGGCACTCTCCTGCTCTCATCATCACTCTCCACACCTTCTTTAA
                      ____________________________________________________________
consensus             CTTCTCCACCCATCTCAGGCACTCTCCTGCTCTCATCATCACTCTCCACACCTTCTTTAA
 
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JMFF047D01+           CTTCGGGCTGGAGAGCTGAGCTGGAAGATCTTTCGCTGCTTGAAGGAAGAGAACTGGCAG
                      ____________________________________________________________
consensus             CTTCGGGCTGGAGAGCTGAGCTGGAAGATCTTTCGCTGCTTGAAGGAAGAGAACTGGCAG
 
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JMFF047D01+           CCATGGAACTCGTAGCAGCTTGTTCCTGCATTTTCCTCCAAAACAACGGAAAATGTACAG
                      ____________________________________________________________
consensus             CCATGGAACTCGTAGCAGCTTGTTCCTGCATTTTCCTCCAAAACAACGGAAAATGTACAG
 
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JMFF047D01+           AAACAGAGAGAGAGAGAGAGGATAAACGTGGTATATTGATCTGGGAAAAAAAAAGAGCCA
                      ____________________________________________________________
consensus             AAACAGAGAGAGAGAGAGAGGATAAACGTGGTATATTGATCTGGGAAAAAAAAAGAGCCA