Contig 008878:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022K24Sequence514008878 (4)ref|XP_002262878.1|1e-32PREDICTED: protein S-acyltransferase 24 [Vitis vinifera] emb|CBI25565.3| unnamed689006972 (4)ref|XP_009762903.1|7e-49PREDICTED: protein S-acyltransferase 24 [Nicotiana sylvestris]
JMFF046K02Sequence567008878 (4)ref|XP_009621389.1|4e-43PREDICTED: protein S-acyltransferase 24 [Nicotiana tomentosiformis]579006972 (4)ref|XP_009762903.1|7e-28PREDICTED: protein S-acyltransferase 24 [Nicotiana sylvestris]
JMFF048L22Sequence390008878 (4)ref|XP_009621389.1|2e-13PREDICTED: protein S-acyltransferase 24 [Nicotiana tomentosiformis]357006972 (4)
JMSF010M12Sequence243008878 (4)700006972 (4)ref|XP_009762903.1|2e-55PREDICTED: protein S-acyltransferase 24 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF022K24+                                ATGCTCAATGATGTATTGCGCAGCCGCAATGCGGTTGTT
JMFF046K02+                                   CTCAATGATGTATTGCGCAGCCGCAATGCGGTTGTT
                      ____________________________________________________________
consensus                                  ATGCTCAATGATGTATTGCGCAGCCGCAATGCGGTTGTT
 
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JMFF048L22+                                                       CAGAAACCGAGCACCC
JMFF022K24+           GAGAGCGGCCCACTGGAGGGCGTAGTAGCCGAGGCCATCCGGCTCAGAAACCGAGCACCC
JMFF046K02+           GAGAGCGGCCCACTGGAGGGCGTAGTAGCCGAGGCCATCCGGCTCAGAAACCGAGCACCC
                      ____________________________________________________________
consensus             GAGAGCGGCCCACTGGAGGGCGTAGTAGCCGAGGCCATCCGGCTCAGAAACCGAGCACCC
 
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JMFF048L22+           CTCGCTCTCGACCAACCTCTGCAGCTTCTCCATGTCCCCGTACGCCGCAGCCGTGTAAAC
JMFF022K24+           CTCGCTCTCGACCAACCTCTGCAGCTTCTCCATGTCCCCGTACGCCGCAGCCGTGTAAAC
JMFF046K02+           CTCGCTCTCGACCAACCTCTGCAGCTTCTCCATGTCCCCGTACGCCGCAGCCGTGTAAAC
                      ____________________________________________________________
consensus             CTCGCTCTCGACCAACCTCTGCAGCTTCTCCATGTCCCCGTACGCCGCAGCCGTGTAAAC
 
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JMFF048L22+           ATCGTTCCTCAAGCTGTCCTCCTCCACCACCGAGCCGGACGCAACTCCGCTATTCGACGT
JMFF022K24+           ATCGTTCCTCAAGCTGTCCTCCTCCACCACCGAGCCGGACGCAACTCCGCTATTCGACGT
JMFF046K02+           ATCGTTCCTCAAGCTGTCCTCCTCCACCACCGAGCCGGACGCAACTCCGCTATTCGACGT
                      ____________________________________________________________
consensus             ATCGTTCCTCAAGCTGTCCTCCTCCACCACCGAGCCGGACGCAACTCCGCTATTCGACGT
 
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JMFF048L22+           CGTCGCCGTCGCCGTCGCCGCCGCAGATCCCCGATCTCTGTATTCGACCTCCTCAACGAC
JMSF010M12+                                                               TCAACGAC
JMFF022K24+           CGTCGCCGTCGCCGTCGCCGCCGCAGATCCCCGATCTCTGTATTCGACCTCCTCAACGAC
JMFF046K02+           CGTCGCCGTCGCCGTCGCCGCCGCAGATCCCCGATCTCTGTATTCGACCTCCTCAACGAC
                      ____________________________________________________________
consensus             CGTCGCCGTCGCCGTCGCCGCCGCAGATCCCCGATCTCTGTATTCGACCTCCTCAACGAC
 
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JMFF048L22+           CTCGATCTCCGACGCCATACAGAACCCGCGGGGAAATTGAGCTTTGAATTGGAAAGATTC
JMSF010M12+           CTCGATCTCCGACGCCATACAGAACCCGCGGGGAAATTGAGCTTTGAATTGGAAAGATTC
JMFF022K24+           CTCGATCTCCGACGCCATACAGAACCCGCGGGGAAATTGAGCTTTGAATTGGAAAGATTC
JMFF046K02+           CTCGATCTCCGACGCCATACAGAACCCGCGGGGAAATTGAGCTTTGAATTGGAAAGATTC
                      ____________________________________________________________
consensus             CTCGATCTCCGACGCCATACAGAACCCGCGGGGAAATTGAGCTTTGAATTGGAAAGATTC
 
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JMFF048L22+           AAAGTTCAAAGTATTGAATTTCAATCAATGCGTATAGTGGTATACTACATACGGTTTGAA
JMSF010M12+           AAAGTTCAAAGTATTGAATTTCAATCAATGCGTATAGTGGTATACTACATACGGTTTGAA
JMFF022K24+           AAAGTTCAAAGTATTGAATTTCAATCAATGCGTATAGTGGTATACTACATACGGTTTGAA
JMFF046K02+           AAAGTTCAAAGTATTGAATTTCAATCAATGCGTATAGTGGTATACTACATACGGTTTGAA
                      ____________________________________________________________
consensus             AAAGTTCAAAGTATTGAATTTCAATCAATGCGTATAGTGGTATACTACATACGGTTTGAA
 
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JMFF048L22+           TATGAATATAGAAATAGAGTTTGGTTGGAGCTGTGTAGGGCTTTTCCAGGAAGGAGAGAA
JMSF010M12+           TATGAATATAGAAATAGAGTTTGGTTGGAGCTGTGTAGGGCTTTTCCAGGAAGGAGAGAA
JMFF022K24+           TATGAATATAGAAATAGAGTTTGGTTGGAGCTGTGTAGGGCTTTTCCAGGAAGGAGAGAA
JMFF046K02+           TATGAATATAGAAATAGAGTTTGGTTGGAGCTGTGTAGGGCTTTTCCAGGAAGGAGAGAA
                      ____________________________________________________________
consensus             TATGAATATAGAAATAGAGTTTGGTTGGAGCTGTGTAGGGCTTTTCCAGGAAGGAGAGAA
 
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JMFF048L22+           GAGGGAATTGTGGT                                              
JMSF010M12+           GAGGGAATTGTGGTGGCGGAGAGAGGGGTTGACTTGGCTGAGGATGACGTACCCC     
JMFF022K24+           GAGGGAATTGTGGTGGCGGAGAGAGGGGTTGACTTGGCTGAGGATGACGTACCCC     
JMFF046K02+           GAGGGAATTGTGGTGGCGGAGAGAGGGGTTGACTTGGCTGAGGATGACGTACCCCGGTTC
                      ____________________________________________________________
consensus             GAGGGAATTGTGGTGGCGGAGAGAGGGGTTGACTTGGCTGAGGATGACGTACCCCGGTTC