Contig 008875:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046C06Sequence603008875 (2)ref|XP_006352669.1|2e-57PREDICTED: pentatricopeptide repeat-containing protein At3g25210, mitochondrial530005529 (3)ref|XP_006343172.1|9e-05PREDICTED: rRNA methyltransferase 1, mitochondrial-like [Solanum tuberosum]
JMSF013B14Sequence489008875 (2)emb|CDP03932.1|1e-35unnamed protein product [Coffea canephora]728005529 (3)ref|XP_010110885.1|3e-08Mitochondrial rRNA methyltransferase [Morus notabilis] gb|EXC28704.1| Mitochondr

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF046C06+ ATC
                      ____________________________________________________________
consensus ATC
 
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JMFF046C06+ AAATGCCGATTTAAACAACGATCTACGGCCGCAGCAGAATTAATCATGGGAGTGTACCAG
                      ____________________________________________________________
consensus AAATGCCGATTTAAACAACGATCTACGGCCGCAGCAGAATTAATCATGGGAGTGTACCAG
 
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JMSF013B14+ TTCTGCAACGCG
JMFF046C06+ GGGGAGGCTCGGAGGGCAAGCGCCTGCGAGGACCTCCTCCACCAGGGTTTCTGCAACGCG
                      ____________________________________________________________
consensus GGGGAGGCTCGGAGGGCAAGCGCCTGCGAGGACCTCCTCCACCAGGGTTTCTGCAACGCG
 
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JMSF013B14+ GTATCGCTTACCGGAGATGNCAATTCGGATAATGCGGAGGTAAGTGACATGGTTGTGCTT
JMFF046C06+ GTATCGCTTACCGGAGATGGCAATTCGGATAATGCGGAGGTAAGTGACATGGTTGTGCTT
                      ____________________________________________________________
consensus GTATCGCTTACCGGAGATGGCAATTCGGATAATGCGGAGGTAAGTGACATGGTTGTGCTT
 
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JMSF013B14+ GTAGCCTCGCTGCTGGCCTGTCCAACGGAAAATGTCCAGTGCCAGGTCCGGGTCGCATTG
JMFF046C06+ GTAGCCTCGCTGCTGGCCTGTCCAACGGAAAATGTCCAGTGCCAGGTCCGGGTCGCATTG
                      ____________________________________________________________
consensus GTAGCCTCGCTGCTGGCCTGTCCAACGGAAAATGTCCAGTGCCAGGTCCGGGTCGCATTG
 
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JMSF013B14+ GGACTGCAAGGCTTCGTCGACGTCTGACGGCGTGAACCCCGGACGGAGTTTGCTTATCCA
JMFF046C06+ GGACTGCAAGGCTTCGTCGACGTCTGACGGCGTGAACCCCGGACGGAGTTTGCTTATCCA
                      ____________________________________________________________
consensus GGACTGCAAGGCTTCGTCGACGTCTGACGGCGTGAACCCCGGACGGAGTTTGCTTATCCA
 
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JMSF013B14+ TGAATCGAAATGCTTTTCCGATGGGGTTAGAGTCCGGGGATTAGGGTTTGGGAGGTCTTT
JMFF046C06+ TGAATCGAAATGCTTTTCCGATGGGGTTAGAGTCCGGGGATTAGGGTTTGGGAGGTCTTT
                      ____________________________________________________________
consensus TGAATCGAAATGCTTTTCCGATGGGGTTAGAGTCCGGGGATTAGGGTTTGGGAGGTCTTT
 
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JMSF013B14+ AGATGGGTGCGAGAGGGTTGGTGCAGTAGGGTGGAGGTGAGAAGATGAAGCTGCGGAAAG
JMFF046C06+ AGATGGGTGCGAGAGGGTTGGTGCAGTAGGGTGGAGGTGAGAAGATGAAGCTGCGGAAAG
                      ____________________________________________________________
consensus AGATGGGTGCGAGAGGGTTGGTGCAGTAGGGTGGAGGTGAGAAGATGAAGCTGCGGAAAG
 
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JMSF013B14+ GGGCCGGAGAGAAAGAGAAGAGAGGATAGATGATCGGAATCTGGAGATAAAGGGATGTGG
JMFF046C06+ GGGCCGGAGAGAAAGAGAAGAGAGGATAGATGATCGGAATCTGGAGATAAAGGGATGTGG
                      ____________________________________________________________
consensus GGGCCGGAGAGAAAGAGAAGAGAGGATAGATGATCGGAATCTGGAGATAAAGGGATGTGG
 
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JMSF013B14+ TAACACTGCTCGCATTGCTCCTGGAACGCAGGCCAAGAATTCGCCGGAATTGGGTTTCGG
JMFF046C06+ TAACACTGCTCGCATTGCTCCTGGAACGCAGGCCAAGAATTCGCCGGAATTGGGTTTCGG
                      ____________________________________________________________
consensus TAACACTGCTCGCATTGCTCCTGGAACGCAGGCCAAGAATTCGCCGGAATTGGGTTTCGG
 
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JMSF013B14+ GATTTTCAGGGTAGAAATGGAGCGCGTAGTTAGGTCACCGCTTTGAACTTCTACT
JMFF046C06+ GATTTTCAGGGTAGAAATGGAGCGCGTAGTTAGGTCACCGCTTTGAACTTCTACTAAAAC
                      ____________________________________________________________
consensus GATTTTCAGGGTAGAAATGGAGCGCGTAGTTAGGTCACCGCTTTGAACTTCTACTAAAAC