Contig 008874:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046B22Sequence347008874 (2)ref|XP_009787559.1|4e-07PREDICTED: probable polyol transporter 4 [Nicotiana sylvestris]377001212 (2)
JMSF023L11Sequence257008874 (2)ref|XP_006350047.1|7e-04PREDICTED: probable polyol transporter 4-like [Solanum tuberosum]736001212 (2)ref|XP_009787559.1|8e-62PREDICTED: probable polyol transporter 4 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF046B22+                        ATATTTCGTAGTATTCTTCCTCCTCTTCACAAGCGGATGATGATTGT
                      ____________________________________________________________
consensus                          ATATTTCGTAGTATTCTTCCTCCTCTTCACAAGCGGATGATGATTGT
 
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JMFF046B22+           GTGAAGGATCATTATCATCATAATAATCTAGCATTTCAGTCTCCATCCTTTTGTAGTAGT
                      ____________________________________________________________
consensus             GTGAAGGATCATTATCATCATAATAATCTAGCATTTCAGTCTCCATCCTTTTGTAGTAGT
 
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JMSF023L11+                            GAACTCAGACATCCCCATCCCCATCTCCACATTCCCATTCTCT
JMFF046B22+           TCGGCGTCCGCAGAGGCGAACTCAGACATCCCCATCCCCATCTCCACATTCCCATTCTCT
                      ____________________________________________________________
consensus             TCGGCGTCCGCAGAGGCGAACTCAGACATCCCCATCCCCATCTCCACATTCCCATTCTCT
 
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JMSF023L11+           TTCAACCCCATCTCTCCCTCCAAGACTGCGCCTTTTTCAGATTCCCAACTGCAAAAACAG
JMFF046B22+           TTCAACCCCATCTCTCCCTCCAAGACTGCACCTTTTTCAGATTCCCAACTGCAAAAACAG
                      ____________________________________________________________
consensus             TTCAACCCCATCTCTCCCTCCAAGACTGCGCCTTTTTCAGATTCCCAACTGCAAAAACAG
 
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JMSF023L11+           AAATT-TGGACCAACCCAGAAGCCTTGAAGGTTAACTGGTTAAGATTCTGGACAGTTTTG
JMFF046B22+           AAATTCTGGACCAACCCAGAAGCCTTGAAGGTTAATTGGATAAGATTTTGGACAGTTTTG
                      ____________________________________________________________
consensus             AAATTCTGGACCAACCCAGAAGCCTTGAAGGTTAATTGGTTAAGATTTTGGACAGTTTTG
 
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JMSF023L11+           GGAACTTGGGCAAGTCAAACCCAGATCTGGGGTGGAAGAAAGACGAGC            
JMFF046B22+           GGAACTTGGGCAAGTCAAACCCAGATATGGGGTGGAAGAAAGACGAGCAGGAAAAATGGC
                      ____________________________________________________________
consensus             GGAACTTGGGCAAGTCAAACCCAGATCTGGGGTGGAAGAAAGACGAGCAGGAAAAATGGC