Contig 008869:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF020N10+                                                                AAAGGAA
                      ____________________________________________________________
consensus                                                                  AAAGGAA
 
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JMSF020N10+           GCTGACTGCGGTAAACTGAATTGCCAATCGGGTACATACAACCCATACGATAAGCCCGTA
                      ____________________________________________________________
consensus             GCTGACTGCGGTAAACTGAATTGCCAATCGGGTACATACAACCCATACGATAAGCCCGTA
 
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JMSF020N10+           TATATAGCAGATAGTGCAAATGCAGTGAACCAATGCCAAATATAGTTCATGAAGAAACTA
                      ____________________________________________________________
consensus             TATATAGCAGATAGTGCAAATGCAGTGAACCAATGCCAAATATAGTTCATGAAGAAACTA
 
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JMSF020N10+           TCTTTTTTTCTCTTTTCATATGGATCCCATATCTCCAGCAAAGCAGCTACAATGTGTCCA
JMSF037M21+                             TATGGATCCCATATCTCCAGCAAAGCAGCTACAATGTGTCCA
                      ____________________________________________________________
consensus             TCTTTTTTTCTCTTTTCATATGGATCCCATATCTCCAGCAAAGCAGCTACAATGTGTCCA
 
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JMSF020N10+           ACAGATATCCTCTGCAAGATTCCCAGCCAGCGTATTCTTTCAAGGTCCACACCATATGTC
JMSF037M21+           NCAGATATCCTCTGCAAGATTCCCAGCCAGCGTATTCTTTCAAGGTCCACACCATATGTC
JMFF045F03+                                                               CATATGTC
                      ____________________________________________________________
consensus             ACAGATATCCTCTGCAAGATTCCCAGCCAGCGTATTCTTTCAAGGTCCACACCATATGTC
 
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JMSF020N10+           AAAGAAGTTATCCCATGCAAGAAACCACCTTGAAGAAGGATACCAAGGAGAAAAAGTTTT
JMSF037M21+           AAAGAAGTTATCCCATGCAAGAAACCACCTTGAAGAAGGATACCAAGGAGAAAAAGTTTT
JMFF045F03+           AAAGAAGTTATCCCATGCAAGAAACCACCTTGAAGAAGGATACCAAGGAGAAAAAGTTNT
                      ____________________________________________________________
consensus             AAAGAAGTTATCCCATGCAAGAAACCACCTTGAAGAAGGATACCAAGGAGAAAAAGTTTT
 
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JMSF020N10+           AATGTCCTTGCCACAACCTTCCAGGTAGACCTTTCCTTGTGCGAAGGATCCTTATAAACA
JMSF037M21+           AATGTCCTTGCCACAACCTTCCAGGTAGACCTTTCCTTGTGCGAAGGATCCTTATAAACA
JMFF045F03+           AATGTCCTTGCCACAACCTTCCAGGTAGACCTTTCCTTGTGCGAAGGATCCTTATAAACA
                      ____________________________________________________________
consensus             AATGTCCTTGCCACAACCTTCCAGGTAGACCTTTCCTTGTGCGAAGGATCCTTATAAACA
 
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JMSF020N10+           ATTGCTAGTGAAACTCCAGCAACAAAAAGGAATAAAGGCATGACGAAGTCAGCCAAATGC
JMSF037M21+           ATTGCTAGTGAAACTCCAGCAACAAAAAGGAATAAAGGCATGNCGAAGTCAGCCAAATGC
JMFF045F03+           ATTGCTAGTGAAACTCCAGCAACAAAAAGGAATAAAGGCATGACGAAGTCAGCCAAATGC
                      ____________________________________________________________
consensus             ATTGCTAGTGAAACTCCAGCAACAAAAAGGAATAAAGGCATGACGAAGTCAGCCAAATGC
 
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JMSF020N10+           AGACCATTCCAAGGAGAATGAGCAATAATTGGAAAAATGGAGCCAGCGTAATCCACAAAT
JMSF037M21+           AGACCATTCCAAGGAGAATGAGCAATAATTGGAAAAATGGAGCCAGCGTAATCCACAAAT
JMFF045F03+           AGACCATTCCAAGGAGAATGAGCAATAATTGGAAAAATGGAGCCAGCGTAATCCACAAAT
                      ____________________________________________________________
consensus             AGACCATTCCAAGGAGAATGAGCAATAATTGGAAAAATGGAGCCAGCGTAATCCACAAAT
 
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JMSF020N10+           GTCATAAGAAAAACGCAGAGGCCGCGGAAGACATCAAGAGATGCCACTCGATCATTTGGA
JMSF037M21+           GTCATAAGAAAAACGCAGAGGCCGCGGAAGACATCAAGAGATGCCACTCGATCATTTGGA
JMFF045F03+           GTCATAAGAAAAACGCAGAGGCCGCGGAAGACATCAAGAGATGCCACTCGATCATTTGGA
                      ____________________________________________________________
consensus             GTCATAAGAAAAACGCAGAGGCCGCGGAAGACATCAAGAGATGCCACTCGATCATTTGGA
 
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JMSF020N10+           CTTTTTGATTTAGTTGTAGCGAAGGTGGTTCTTCTACTTCTAGCTCCTGATCCGCCAGCT
JMSF037M21+           CTTTTTGATTTAGTTGTAGCGAAGGTGGTTCTTCTACTTCTAGCTCCTGATCCGCCAGCT
JMFF045F03+           CTTTTTGATTTAGTTGTAGCGAAGGTGGTTCTTCTACTTCTAGCTCCTGATCCGCCAGCT
                      ____________________________________________________________
consensus             CTTTTTGATTTAGTTGTAGCGAAGGTGGTTCTTCTACTTCTAGCTCCTGATCCGCCAGCT
 
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JMSF020N10+           TGAAATTCAACGTCCTCTACTAACAAGGGCTTACTTGCAGCCATGATATGATTGGTTGTT
JMSF037M21+           TGAAATTCAACGTCCTCTACTAACAAGGGCTTACTTGCAGCCNTGATATGATTGGTTGTT
JMFF045F03+           TGAAATTCAACGTCCTCTACTAACAAGGGCTTACTTGCAGCCATGATATGATTGGTTGTT
                      ____________________________________________________________
consensus             TGAAATTCAACGTCCTCTACTAACAAGGGCTTACTTGCAGCCATGATATGATTGGTTGTT
 
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JMSF020N10+           GGTATTGTCTTGCGGTGAGCACT                                     
JMSF037M21+           GGTATTGTCTTGCGGTGAGCACT                                     
JMFF045F03+           GGTATTGTCTTGCGGTGAGCACTGCAGCGTGGAGGAGGAGCAGAGCTGCTGCTATTTATA
                      ____________________________________________________________
consensus             GGTATTGTCTTGCGGTGAGCACTGCAGCGTGGAGGAGGAGCAGAGCTGCTGCTATTTATA
 
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JMFF045F03+           CTGCTCCTCTCCACTCACTAGCTTCAATTATGCACATGGAGCTGACGTATATGCTACTCT
                      ____________________________________________________________
consensus             CTGCTCCTCTCCACTCACTAGCTTCAATTATGCACATGGAGCTGACGTATATGCTACTCT
 
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JMFF045F03+           ATTTTTTTGCAATTTATTTTGTTGCTTGAGAACTCAGAAGAGAAGAGAAGAAAGAGACAA
                      ____________________________________________________________
consensus             ATTTTTTTGCAATTTATTTTGTTGCTTGAGAACTCAGAAGAGAAGAGAAGAAAGAGACAA