Contig 008868:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044M06Sequence458008868 (2)ref|XP_009802892.1|3e-22PREDICTED: RPM1-interacting protein 4-like [Nicotiana sylvestris]454008868 (2)ref|XP_009802892.1|6e-23PREDICTED: RPM1-interacting protein 4-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF044M06-                                GTTAGAATAATTCTTGCCCCCTTTTTTTTTTTCATTCA
JMFF044M06+                                 GTTAGAATAATTCTTGCCCCCTTTTTTTTTTTCATTCA
                      ____________________________________________________________
consensus                                   GTTAGAATAATTCTTGCCCCCTTTTTTTTTTTCATTCA
 
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rJMFF044M06-          ATTAAATTGAAGTGCAATATTATACATGATGATAGTATGTAAAGAAAAACAACCACCACA
JMFF044M06+           ATTAAATTGAAGTGCAATATTATACATGATGATAGTATGTAAAGAAAAACAACCACCACA
                      ____________________________________________________________
consensus             ATTAAATTGAAGTGCAATATTATACATGATGATAGTATGTAAAGAAAAACAACCACCACA
 
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rJMFF044M06-          ACTCATGCCCCCCCTTCTGGACTAGAAAGGGATGATATTTGGCCTATGAATAATAGCATA
JMFF044M06+           ACTCATGCCCCCCCTTCTGGACTAGAAAGGGATGATATTTGGCCTATGAATAATAGCATA
                      ____________________________________________________________
consensus             ACTCATGCCCCCCCTTCTGGACTAGAAAGGGATGATATTTGGCCTATGAATAATAGCATA
 
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rJMFF044M06-          ATATACCACCACCCAATGGCCATTGCTCTTCAATTTTCACCTTTCATTTCACAAGTAAAA
JMFF044M06+           ATATACCACCACCCAATGGCCATTGCTCTTCAATTTTCACCTTTCATTTCACAAGTAGAA
                      ____________________________________________________________
consensus             ATATACCACCACCCAATGGCCATTGCTCTTCAATTTTCACCTTTCATTTCACAAGTAGAA
 
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rJMFF044M06-          AAGCTCCGGTTTTTCAGAAACAGCAAAACCATTTCTTCGTGTTGTCGTTTTCATTCTGTC
JMFF044M06+           AAGCTCCGGTTTTTCAGAAACAGCAAAACCATTTCTTCGTGTTGTCGTTTTCATTCTGTC
                      ____________________________________________________________
consensus             AAGCTCCGGTTTTTCAGAAACAGCAAAACCATTTCTTCGTGTTGTCGTTTTCATTCTGTC
 
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rJMFF044M06-          CGCCGTTCATTGGTTTTGCTGCCTGCCGCACCCCCGTCCCCGACGTTCCGGTGGCTTTCT
JMFF044M06+           CGCCGTTCATTGGTTTTGCTGCCTGCCGCACCCCCGTCCCCGACGTTCCGGTGGCTTTCT
                      ____________________________________________________________
consensus             CGCCGTTCATTGGTTTTGCTGCCTGCCGCACCCCCGTCCCCGACGTTCCGGTGGCTTTCT
 
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rJMFF044M06-          TTTCATCCCTGGCCTTGGCAAATATGACGGTAAATCCATCGGCGGAGGCGGGATTATTCA
JMFF044M06+           TTTCATGCCTGGCCTTGGCAAATATGACGGTAAATCCATCGGCGGAGGCGGGATTATTCA
                      ____________________________________________________________
consensus             TTTCATGCCTGGCCTTGGCAAATATGACGGTAAATCCATCGGCGGAGGCGGGATTATTCA
 
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rJMFF044M06-          CATCCCACTCGCCAAATTTTGGCAGGGGCCGGCCTTTCTCTTCAGACGTCATGAAA    
JMFF044M06+           CATCCCACTCGCCAAATTTTGGCAGGGGCCGGCCTTTCTCTTCAGACGTCATGAAAGATT
                      ____________________________________________________________
consensus             CATCCCACTCGCCAAATTTTGGCAGGGGCCGGCCTTTCTCTTCAGACGTCATGAAAGATT