Contig 008857:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004A20Sequence560008857 (6)ref|XP_010102357.1|4e-47ZmSiR protein [Morus notabilis] gb|EXB93318.1| ZmSiR protein [Morus notabilis]738011160 (5)ref|XP_009603091.1|3e-71PREDICTED: sulfite reductase 1 [ferredoxin], chloroplastic [Nicotiana tomentosi
JMFF038F02Sequence513008857 (6)ref|XP_010102357.1|2e-26ZmSiR protein [Morus notabilis] gb|EXB93318.1| ZmSiR protein [Morus notabilis]761011160 (5)ref|XP_009603091.1|2e-66PREDICTED: sulfite reductase 1 [ferredoxin], chloroplastic [Nicotiana tomentosi
JMFF043C08Sequence646008857 (6)ref|XP_007015074.1|2e-57Ferredoxin:sulfite reductase isoform 2 [Theobroma cacao] ref|XP_007015075.1| Fer631011160 (5)gb|AGT40330.1|2e-28sulfite reductase [Nicotiana attenuata]
JMFS125G03Sequence567008857 (6)ref|XP_009603091.1|1e-58PREDICTED: sulfite reductase 1 [ferredoxin], chloroplastic [Nicotiana tomentosi
JMSF024M18Sequence661008857 (6)ref|XP_009603091.1|1e-67PREDICTED: sulfite reductase 1 [ferredoxin], chloroplastic [Nicotiana tomentosi772011160 (5)ref|XP_009603091.1|4e-82PREDICTED: sulfite reductase 1 [ferredoxin], chloroplastic [Nicotiana tomentosi
JMSF030P19Sequence616008857 (6)ref|XP_009603091.1|4e-69PREDICTED: sulfite reductase 1 [ferredoxin], chloroplastic [Nicotiana tomentosi722011160 (5)gb|ACN23794.1|2e-61sulfite reductase [Nicotiana benthamiana] gb|ACN82434.1| sulfite reductase [Nico

Alignment

This contig is upended


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JMSF024M18+                                                                  CTTAA
                      ____________________________________________________________
consensus                                                                    CTTAA
 
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JMSF030P19+                                        AATGTTTGTCTCGTTGTCAATCGAAGGGTTC
JMSF024M18+           GGTCTTTCTTCAGGACACCATGGAGTTGAAATGTTTGTCTCGTTGTCAATCGAAGGGTTC
                      ____________________________________________________________
consensus             GGTCTTTCTTCAGGACACCATGGAGTTGAAATGTTTGTCTCGTTGTCAATCGAAGGGTTC
 
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JMFS125G03+                         TCAGCAAGATCATCCATGACCAAGTAGAGTCTGTTTGGAACCTTTC
JMSF030P19+           CAATTCCAAATTGGTCAGCAAGATCATCCATGACCAAGTAGAGTCTGTTTGGAACCTTTC
JMSF024M18+           CAATTCCAAATTGGTCAGCAAGATCATCCATGACCAAGTAGAGTCTGTTTGGAACCTTTC
JMFF043C08+                         TCAGCAAGATCATCCATGACCAAGTAGAGTCTGTTNGGAACCTTTC
                      ____________________________________________________________
consensus             CAATTCCAAATTGGTCAGCAAGATCATCCATGACCAAGTAGAGTCTGTTTGGAACCTTTC
 
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JMFS125G03+           CACCAGGGTTTTTTGTTCGGAGCATAAATGAATATGACCTTTTCCCACGCTCATCTCTAT
JMSF030P19+           CACCAGGGTTTTTTGTTCGGAGCATAAATGAATATGACCTTTTCCCACGCTCATCTCTAT
JMSF024M18+           CACCAGGGTTTTTTGTTCGGAGCATAAATGAATATGACCTTTTCCCACGCTCATCTCTAT
JMFF004A20+                GGGTTTTTTGTTCGGAGCATAAATGAATATGACCTTTTCCCACGCTCATCTCTAT
JMFF043C08+           CACCAGGGTTTTTTGTTCGGAGCATAAATGAATATGACCTTTTCCCACGCTCATCTCTAT
                      ____________________________________________________________
consensus             CACCAGGGTTTTTTGTTCGGAGCATAAATGAATATGACCTTTTCCCACGCTCATCTCTAT
 
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JMFS125G03+           TATATTGTTGATAACTCCCATGAAACTTGATCAATTGAGTAGCAGCCTCATTGATGTTAG
JMSF030P19+           TATATTGTTGATAACTCCCATGAAACTTGATCAATTGAGTAGCAGCCTCATTGATGTTAG
JMSF024M18+           TATATTGTTGATAACTCCCATGAAACTTGATCAATTGAGTAGCAGCCTCATTGATGTTAG
JMFF004A20+           TATATTGTTGATAACTCCCATGAAACTTGATCAATTGAGTAGCAGCCTCATTGATGTTAG
JMFF038F02+                                      TGATCAATTGAGTAGCAGCCTCATTGATGTTAG
JMFF043C08+           TATATTGTTGATAACTCCCATGAAACTTGATCAATTGAGTAGCAGCCTCATTGATGTTAG
                      ____________________________________________________________
consensus             TATATTGTTGATAACTCCCATGAAACTTGATCAATTGAGTAGCAGCCTCATTGATGTTAG
 
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JMFS125G03+           GTGCATCTGTAAGAATTTCCTCATTGAGAGGATACCTTATGAAGTTACTTTGCTCTTTGA
JMSF030P19+           GTGCATCTGTAAGAATTTCCTCATTGAGAGGATACCTTATGAAGTTACTTTGCTCTTTGA
JMSF024M18+           GTGCATCTGTAAGAATTTCCTCATTGAGAGGATACCTTATGAAGTTACTTTGCTCTTTGA
JMFF004A20+           GTGCATCTGTAAGAATTTCCTCATTGAGAGGATACCTTATGAAGTTACTTTGCTCTTTGA
JMFF038F02+           GTGCATCTGTAAGAATTTCCTCATTGAGAGGATACCTTATGAAGTTACTTTGCTCTTTGA
JMFF043C08+           GTGCATCTGTAAGAATTTCCTCATTGAGAGGATACCTTATGAAGTTACTTTGCTCTTTGA
                      ____________________________________________________________
consensus             GTGCATCTGTAAGAATTTCCTCATTGAGAGGATACCTTATGAAGTTACTTTGCTCTTTGA
 
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JMFS125G03+           ATATTTCAACCTTGCTACGTTTAGGTTTGGCAGAAGTGTCCAACTCCGATGGCGTCGTTA
JMSF030P19+           ATATTTCAACCTTGCTACGTTTAGGTTTGGCAGAAGTGTCCAACTCCGATGGCGTCGTTA
JMSF024M18+           ATATTTCAACCTTGCTACGTTTAGGTTTGGCAGAAGTGTCCAACTCCGATGGCGTCGTTA
JMFF004A20+           ATATTTCAACCTTGCTACGTTTAGGTTTGGCAGAAGTGTCCAACTCCGATGGCGTCGTTA
JMFF038F02+           ATATTTCAACCTTGCTACGTTTAGGTTTGGCAGAAGTGTCCAACTCCGATGGCGTCGTTA
JMFF043C08+           ATATTTCAACCTTGCTACGTTTAGGTTTGGCAGAAGTGTCCAACTCCGATGGCGTCGTTA
                      ____________________________________________________________
consensus             ATATTTCAACCTTGCTACGTTTAGGTTTGGCAGAAGTGTCCAACTCCGATGGCGTCGTTA
 
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JMFS125G03+           CGGCTCTAATGACCGAAACGTTAGGACTCGAAGCCGAGGCAGCGCGAAACACGTGAAGAC
JMSF030P19+           CGGCTCTAATGACCGAAACGTTAGGACTCGAAGCCGAGGCAGCGCGAAACACGTGAAGAC
JMSF024M18+           CGGCTCTAATGACCGAAACGTTAGGACTCGAAGCCGAGGCAGCGCGAAACACGTGAAGAC
JMFF004A20+           CGGCTCTAATGACCGAAACGTTAGGACTCGAAGCCGAGGCAGCGCGAAACACGTGAAGAC
JMFF038F02+           CGGCTCTAATGACCGAAACGTTAGGACTCGAAGCCGAGGCAGCGCGAAACACGTGAAGAC
JMFF043C08+           CGGCTCTAATGACCGAAACGTTAGGACTCGAAGCCGAGGCAGCGCGAAACACGTGAAGAC
                      ____________________________________________________________
consensus             CGGCTCTAATGACCGAAACGTTAGGACTCGAAGCCGAGGCAGCGCGAAACACGTGAAGAC
 
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JMFS125G03+           GGTTGCTGAGGCGGAGCGAATCGGAGCCGCTCCTCAGCCCGGTGCAACTGGGAATTTGAA
JMSF030P19+           GGTTGCTGAGGCGGAGCGAATCGGAGCCGCTCCTCAGCCCGGTGCAACTGGGAATTTGAA
JMSF024M18+           GGTTGCTGAGGCGGAGCGAATCGGAGCCGCTCCTCAGCCCGGTGCAACTGGGAATTTGAA
JMFF004A20+           GGTTGCTGAGGCGGAGCGAATCGGAGCCGCTCCTCAGCCCGGTGCAACTGGGAATTTGAA
JMFF038F02+           GGTTGCTGAGGCGGAGCGAATCGGAGCCGCTCCTCAGCCCGGTGCAACTGGGAATTTGAA
JMFF043C08+           GGTTGCTGAGGCGGAGCGAATCGGAGCCGCTCCTCAGCCCGGTGCAACTGGGAATTTGAA
                      ____________________________________________________________
consensus             GGTTGCTGAGGCGGAGCGAATCGGAGCCGCTCCTCAGCCCGGTGCAACTGGGAATTTGAA
 
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JMFS125G03+           TCTTCGGATCCTTGGAGATGGCGGTCCTAGCCGCTGCTGCTCCAAACGACGTCGTCATCC
JMSF030P19+           TCTTCGGATCCTTGGAGATGGCGGTCCTAGCCGCTGCTGCTCCAAACGACGTCGTCATCC
JMSF024M18+           TCTTCGGATCCTTGGAGATGGCGGTCCTAGCCGCTGCTGCTCCAAACGACGTCGTCATCC
JMFF004A20+           TCTTCGGATCCTTGGAGATGGCGGTCCTAGCCGCTGCTGCTCCAAACGACGTCGTCATCC
JMFF038F02+           TCTTCGGATCCTTGGAGATGGCGGTCCTAGCCGCTGCTGCTCCAAACGGCGTCGTCATCC
JMFF043C08+           TCTTCGGATCCTTGGAGATGGCGGTCCTAGCCGCTGCTGCTCCAAACGGCGTCGTCATCC
                      ____________________________________________________________
consensus             TCTTCGGATCCTTGGAGATGGCGGTCCTAGCCGCTGCTGCTCCAAACGACGTCGTCATCC
 
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JMFS125G03+           CCTCCGACAGAAACAGAAAACGACGGAGAGAATTTCCCTACCGGAAAAGGAGCTTTGATC
JMSF030P19+           CCTCCGACAGAAACAGAAAACGACGGAGAGAATTTCCCTACCGGAAAAGGAGCTTTGATC
JMSF024M18+           CCTCCGACAGAAACAGAAAACGACGGAGAGAATTTCCCTACCGGAAAAGGAGCTTTGATC
JMFF004A20+           CCTCCGACAGAAACAGAAAACGACGGAGAGAATTTCCCTACCGGAAAAGGAGCTTTGATC
JMFF038F02+           CCTCCGACAGAAACAGAAAACGACGGAGAGAATTTCCCTACCGGAAAAGGAGCTTTGATC
JMFF043C08+           CCTCCGACAGAAACAGAAAACGACGGAGAGAATTTCCCTACCGGAAAAGGAGCTTTGATC
                      ____________________________________________________________
consensus             CCTCCGACAGAAACAGAAAACGACGGAGAGAATTTCCCTACCGGAAAAGGAGCTTTGATC
 
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JMFS125G03+           AAAGGCGATTGAGGAGATTTTCCGGCTGAGAAACAATGAA                    
JMSF030P19+           AAAGGCGATTGAGGAGATTTTCCGGCTGAGAAACAATGAAGAAC                
JMSF024M18+           AAAGGCGATTGAGGAGATTTTCCGGCTGAGAAACAATGAAGAACAGAGAAGAGTT     
JMFF004A20+           AAAGGCGATTGAGGAGATTTTCCGGCTGAGAAACAATGAAGAACAGAGAAGAGTTGGACT
JMFF038F02+           AAAGGCGATTGAGGAGATTTTCCGGCTGAGAAACAATGAAGAACAGAGAAGAGTTGGACT
JMFF043C08+           AAAGGCGATTGAGGAGATTTTCCGGCTGAGAAACAATGAAGAACAGAGAAGAGTTGGACT
                      ____________________________________________________________
consensus             AAAGGCGATTGAGGAGATTTTCCGGCTGAGAAACAATGAAGAACAGAGAAGAGTTGGACT
 
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JMFF004A20+           GCGAGAGGGATATTTCGCAGTTTAT                                   
JMFF038F02+           GCGAGAGGGATATTTCGCAGTTTATATACTGAAAAGTGCGAAACGCAATTATGCAAATGC
JMFF043C08+           GCGAGAGGGATATTTCGCAGTTTATATACTGAAAAGTGCGAAACGCAATTATGCAAATGC
                      ____________________________________________________________
consensus             GCGAGAGGGATATTTCGCAGTTTATATACTGAAAAGTGCGAAACGCAATTATGCAAATGC