Contig 008855:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042O04Sequence543008855 (4)gb|EYU24475.1|3e-53hypothetical protein MIMGU_mgv1a014286mg [Erythranthe guttata]484008855 (4)gb|EYU24475.1|1e-48hypothetical protein MIMGU_mgv1a014286mg [Erythranthe guttata]
JMFF049N15Sequence543008855 (4)gb|EYU24475.1|3e-53hypothetical protein MIMGU_mgv1a014286mg [Erythranthe guttata]542008855 (4)gb|EYU24475.1|4e-50hypothetical protein MIMGU_mgv1a014286mg [Erythranthe guttata]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF049N15-                                                                    ACT
rJMFF049N15+                                                                   ACT
rJMFF042O04+                                                                   ACT
JMFF042O04-                                                                    ACT
                      ____________________________________________________________
consensus                                                                      ACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF049N15-           ATTTGCCTATCTTTCTCACTCGTAGAGTCGTAGAATAGCATTCTCAATGGCGATCACAAA
rJMFF049N15+          ATTTGCCTATCTTTCTCACTCGTAGAGTCGTAGAATAGCATTCTCAATGGCGATCACAAA
rJMFF042O04+          ATTTGCCTATCTTTCTCACTCGTAGAGTCGTAGAATAGCATTCTCAATGGCGATCACAAA
JMFF042O04-           ATTTGCCTATCTTTCTCACTCGTAGAGTCGTAGAATAGCATTCTCAATGGCGATCACAAA
                      ____________________________________________________________
consensus             ATTTGCCTATCTTTCTCACTCGTAGAGTCGTAGAATAGCATTCTCAATGGCGATCACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF049N15-           CGCGCCGGCTATGATCGTAACGGTCGCGGTGGCGGCGCTCTTCATTTTCTCAGTTGCCTC
rJMFF049N15+          CGCGCCGGCTATGATCGTAACGGTCGCGGTGGCGGCGCTCTTCATTTTCTCAGTTGCCTC
rJMFF042O04+          CGCGCCGGCTATGATCGTAACGGTCGCGGTGGCGGCGCTCTTCATTTTCTCAGTTGCCTC
JMFF042O04-           CGCGCCGGCTATGATCGTAACGGTCGCGGTGGCGGCGCTCTTCATTTTCTCAGTTGCCTC
                      ____________________________________________________________
consensus             CGCGCCGGCTATGATCGTAACGGTCGCGGTGGCGGCGCTCTTCATTTTCTCAGTTGCCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF049N15-           CGTGACGGCCTCTGATGGTCCATTCATATTGGCGCACAAGAAAGTTTCTCTCACGAAGCT
rJMFF049N15+          CGTGACGGCCTCTGATGGTCCATTCATATTGGCGCACAAGAAAGTTTCTCTCACGAAGCT
rJMFF042O04+          CGTGACGGCCTCTGATGGTCCATTCATATTGGCGCACAAGAAAGTTTCTCTCACGAAGCT
JMFF042O04-           CGTGACGGCCTCTGATGGTCCATTCATATTGGCGCACAAGAAAGTTTCTCTCACGAAGCT
                      ____________________________________________________________
consensus             CGTGACGGCCTCTGATGGTCCATTCATATTGGCGCACAAGAAAGTTTCTCTCACGAAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF049N15-           CAGTTCCAGCACTGAGCGAGTATCCGTTTCCATCGACATCTATAACCGCGGATCTAAGAC
rJMFF049N15+          CAGTTCCAGCACTGAGCGAGTATCCGTTTCCATCGACATCTATAACCGCGGATCTAAGAC
rJMFF042O04+          CAGTTCCAGCACTGAGCGAGTATCCGTTTCCATCGACATCTATAACCGCGGATCTAAGAC
JMFF042O04-           CAGTTCCAGCACTGAGCGAGTATCCGTTTCCATCGACATCTATAACCGCGGATCTAAGAC
                      ____________________________________________________________
consensus             CAGTTCCAGCACTGAGCGAGTATCCGTTTCCATCGACATCTATAACCGCGGATCTAAGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF049N15-           TGCTTATGATGTAACTCTTGCAGACAGTAGTTGGGATCAGGAAATATTTTATTTCGTGAC
rJMFF049N15+          TGCTTATGATGTAACTCTTGCAGACAGTAGTTGGGATCAGGAAATATTTTATTTCGTGAC
rJMFF042O04+          TGCTTATGATGTAACTCTTGCAGACAGTAGTTGGGATCAGGAAATATTTTATTTCGTGAC
JMFF042O04-           TGCTTATGATGTAACTCTTGCAGACAGTAGTTGGGATCAGGAAATATTTTATTTCGTGAC
                      ____________________________________________________________
consensus             TGCTTATGATGTAACTCTTGCAGACAGTAGTTGGGATCAGGAAATATTTTATTTCGTGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF049N15-           TGGCAACACATCTAAGTCATGGGAAAAGCTTGACGTCGGTTCTGTTGTTTCCCACTCTTT
rJMFF049N15+          TGGCAACACATCTAAGTCATGGGAAAAGCTTGACGTCGGTTCTGTTGTTTCCCACTCTTT
rJMFF042O04+          TGGCAACACATCTAAGTCATGGGAAAAGCTTGACGTCGGTTCTGTTGTTTCCCACTCTTT
JMFF042O04-           TGGCAACACATCTAAGTCATGGGAAAAGCTTGACGTCGGTTCTGTTGTTTCCCACTCTTT
                      ____________________________________________________________
consensus             TGGCAACACATCTAAGTCATGGGAAAAGCTTGACGTCGGTTCTGTTGTTTCCCACTCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF049N15-           TGAGTTGGAATCCAGAGTGAAAACTACTTACTATGGTGCACCTGCTCTTATCACATATCA
rJMFF049N15+          TGAGTTGGAATCCAGAGTGAAAACTACTTACTATGGTGCACCTGCTCTTATCACATATCA
rJMFF042O04+          TGAGTTGGAATCCAGAGTGAAAACTACTTACTATGGTGCACCTGCTCTTATCACATATCA
JMFF042O04-           TGAGTTGGAATCCAGAGTGAAAACTACTTACTATGGTGCACCTGCTCTTATCACATATCA
                      ____________________________________________________________
consensus             TGAGTTGGAATCCAGAGTGAAAACTACTTACTATGGTGCACCTGCTCTTATCACATATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF049N15-           TGTTGCCAGCAAGCCCAAACTACAGATAGCATACTCAACTCCAATTATACCATTGGCAAT
rJMFF049N15+          TGTTGCCAGCAAGCCCAAACTACAGATAGCATACTCAACTCCAATTATACCATTGGCAAT
rJMFF042O04+          TGTTGCCAGCAAGCCCAAACTACAGATAGCATACTCAACTCCAATTATACCATTGGCAAT
JMFF042O04-           TGTTGCCAGCAAGCCCAAACTACAGATAGCATACTCAACTCCAATTATACCATTGGCAAT
                      ____________________________________________________________
consensus             TGTTGCCAGCAAGCCCAAACTACAGATAGCATACTCAACTCCAATTATACCATTGGCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF049N15-           CCTATCTGCAAAAGTGGTTGAAAGCAAATTGGTATTGGCTAAGAGTTTAGTGGGAAAATA
rJMFF049N15+          CCTATCTGCAAAAGTGG-TGAAAGCAAATTGGTATTGGCTAAGAGTTTAGTGGGAAAATA
rJMFF042O04+          C                                                           
JMFF042O04-           CCTATCTGCAAAAGTGGTTGAAAGCAAATTGGTATTGGCTAAGAGTTTAGTGGGAAAATA
                      ____________________________________________________________
consensus             CCTATCTGCAAAAGTGGTTGAAAGCAAATTGGTATTGGCTAAGAGTTTAGTGGGAAAATA