Contig 008855:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042O04Sequence543008855 (4)gb|EYU24475.1|3e-53hypothetical protein MIMGU_mgv1a014286mg [Erythranthe guttata]484008855 (4)gb|EYU24475.1|1e-48hypothetical protein MIMGU_mgv1a014286mg [Erythranthe guttata]
JMFF049N15Sequence543008855 (4)gb|EYU24475.1|3e-53hypothetical protein MIMGU_mgv1a014286mg [Erythranthe guttata]542008855 (4)gb|EYU24475.1|4e-50hypothetical protein MIMGU_mgv1a014286mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF049N15- ACT
rJMFF049N15+ ACT
rJMFF042O04+ ACT
JMFF042O04- ACT
                      ____________________________________________________________
consensus ACT
 
. : . : . : . : . : . :
JMFF049N15- ATTTGCCTATCTTTCTCACTCGTAGAGTCGTAGAATAGCATTCTCAATGGCGATCACAAA
rJMFF049N15+ ATTTGCCTATCTTTCTCACTCGTAGAGTCGTAGAATAGCATTCTCAATGGCGATCACAAA
rJMFF042O04+ ATTTGCCTATCTTTCTCACTCGTAGAGTCGTAGAATAGCATTCTCAATGGCGATCACAAA
JMFF042O04- ATTTGCCTATCTTTCTCACTCGTAGAGTCGTAGAATAGCATTCTCAATGGCGATCACAAA
                      ____________________________________________________________
consensus ATTTGCCTATCTTTCTCACTCGTAGAGTCGTAGAATAGCATTCTCAATGGCGATCACAAA
 
. : . : . : . : . : . :
JMFF049N15- CGCGCCGGCTATGATCGTAACGGTCGCGGTGGCGGCGCTCTTCATTTTCTCAGTTGCCTC
rJMFF049N15+ CGCGCCGGCTATGATCGTAACGGTCGCGGTGGCGGCGCTCTTCATTTTCTCAGTTGCCTC
rJMFF042O04+ CGCGCCGGCTATGATCGTAACGGTCGCGGTGGCGGCGCTCTTCATTTTCTCAGTTGCCTC
JMFF042O04- CGCGCCGGCTATGATCGTAACGGTCGCGGTGGCGGCGCTCTTCATTTTCTCAGTTGCCTC
                      ____________________________________________________________
consensus CGCGCCGGCTATGATCGTAACGGTCGCGGTGGCGGCGCTCTTCATTTTCTCAGTTGCCTC
 
. : . : . : . : . : . :
JMFF049N15- CGTGACGGCCTCTGATGGTCCATTCATATTGGCGCACAAGAAAGTTTCTCTCACGAAGCT
rJMFF049N15+ CGTGACGGCCTCTGATGGTCCATTCATATTGGCGCACAAGAAAGTTTCTCTCACGAAGCT
rJMFF042O04+ CGTGACGGCCTCTGATGGTCCATTCATATTGGCGCACAAGAAAGTTTCTCTCACGAAGCT
JMFF042O04- CGTGACGGCCTCTGATGGTCCATTCATATTGGCGCACAAGAAAGTTTCTCTCACGAAGCT
                      ____________________________________________________________
consensus CGTGACGGCCTCTGATGGTCCATTCATATTGGCGCACAAGAAAGTTTCTCTCACGAAGCT
 
. : . : . : . : . : . :
JMFF049N15- CAGTTCCAGCACTGAGCGAGTATCCGTTTCCATCGACATCTATAACCGCGGATCTAAGAC
rJMFF049N15+ CAGTTCCAGCACTGAGCGAGTATCCGTTTCCATCGACATCTATAACCGCGGATCTAAGAC
rJMFF042O04+ CAGTTCCAGCACTGAGCGAGTATCCGTTTCCATCGACATCTATAACCGCGGATCTAAGAC
JMFF042O04- CAGTTCCAGCACTGAGCGAGTATCCGTTTCCATCGACATCTATAACCGCGGATCTAAGAC
                      ____________________________________________________________
consensus CAGTTCCAGCACTGAGCGAGTATCCGTTTCCATCGACATCTATAACCGCGGATCTAAGAC
 
. : . : . : . : . : . :
JMFF049N15- TGCTTATGATGTAACTCTTGCAGACAGTAGTTGGGATCAGGAAATATTTTATTTCGTGAC
rJMFF049N15+ TGCTTATGATGTAACTCTTGCAGACAGTAGTTGGGATCAGGAAATATTTTATTTCGTGAC
rJMFF042O04+ TGCTTATGATGTAACTCTTGCAGACAGTAGTTGGGATCAGGAAATATTTTATTTCGTGAC
JMFF042O04- TGCTTATGATGTAACTCTTGCAGACAGTAGTTGGGATCAGGAAATATTTTATTTCGTGAC
                      ____________________________________________________________
consensus TGCTTATGATGTAACTCTTGCAGACAGTAGTTGGGATCAGGAAATATTTTATTTCGTGAC
 
. : . : . : . : . : . :
JMFF049N15- TGGCAACACATCTAAGTCATGGGAAAAGCTTGACGTCGGTTCTGTTGTTTCCCACTCTTT
rJMFF049N15+ TGGCAACACATCTAAGTCATGGGAAAAGCTTGACGTCGGTTCTGTTGTTTCCCACTCTTT
rJMFF042O04+ TGGCAACACATCTAAGTCATGGGAAAAGCTTGACGTCGGTTCTGTTGTTTCCCACTCTTT
JMFF042O04- TGGCAACACATCTAAGTCATGGGAAAAGCTTGACGTCGGTTCTGTTGTTTCCCACTCTTT
                      ____________________________________________________________
consensus TGGCAACACATCTAAGTCATGGGAAAAGCTTGACGTCGGTTCTGTTGTTTCCCACTCTTT
 
. : . : . : . : . : . :
JMFF049N15- TGAGTTGGAATCCAGAGTGAAAACTACTTACTATGGTGCACCTGCTCTTATCACATATCA
rJMFF049N15+ TGAGTTGGAATCCAGAGTGAAAACTACTTACTATGGTGCACCTGCTCTTATCACATATCA
rJMFF042O04+ TGAGTTGGAATCCAGAGTGAAAACTACTTACTATGGTGCACCTGCTCTTATCACATATCA
JMFF042O04- TGAGTTGGAATCCAGAGTGAAAACTACTTACTATGGTGCACCTGCTCTTATCACATATCA
                      ____________________________________________________________
consensus TGAGTTGGAATCCAGAGTGAAAACTACTTACTATGGTGCACCTGCTCTTATCACATATCA
 
. : . : . : . : . : . :
JMFF049N15- TGTTGCCAGCAAGCCCAAACTACAGATAGCATACTCAACTCCAATTATACCATTGGCAAT
rJMFF049N15+ TGTTGCCAGCAAGCCCAAACTACAGATAGCATACTCAACTCCAATTATACCATTGGCAAT
rJMFF042O04+ TGTTGCCAGCAAGCCCAAACTACAGATAGCATACTCAACTCCAATTATACCATTGGCAAT
JMFF042O04- TGTTGCCAGCAAGCCCAAACTACAGATAGCATACTCAACTCCAATTATACCATTGGCAAT
                      ____________________________________________________________
consensus TGTTGCCAGCAAGCCCAAACTACAGATAGCATACTCAACTCCAATTATACCATTGGCAAT
 
. : . : . : . : . : . :
JMFF049N15- CCTATCTGCAAAAGTGGTTGAAAGCAAATTGGTATTGGCTAAGAGTTTAGTGGGAAAATA
rJMFF049N15+ CCTATCTGCAAAAGTGG-TGAAAGCAAATTGGTATTGGCTAAGAGTTTAGTGGGAAAATA
rJMFF042O04+ C
JMFF042O04- CCTATCTGCAAAAGTGGTTGAAAGCAAATTGGTATTGGCTAAGAGTTTAGTGGGAAAATA
                      ____________________________________________________________
consensus CCTATCTGCAAAAGTGGTTGAAAGCAAATTGGTATTGGCTAAGAGTTTAGTGGGAAAATA