| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004M16 | Sequence | 387 | 008854 (8) | emb|CDP08838.1| | 3e-07 | unnamed protein product [Coffea canephora] | 683 | 008854 (8) | ref|XP_011091944.1| | 2e-53 | PREDICTED: remorin-like [Sesamum indicum] |
| JMFF026H23 | Sequence | 578 | 008854 (8) | ref|XP_011091944.1| | 2e-30 | PREDICTED: remorin-like [Sesamum indicum] | 675 | 008854 (8) | ref|XP_011091944.1| | 3e-53 | PREDICTED: remorin-like [Sesamum indicum] |
| JMFF027G12 | Sequence | 531 | 008854 (8) | ref|XP_011091944.1| | 2e-52 | PREDICTED: remorin-like [Sesamum indicum] | |||||
| JMFF042F07 | Sequence | 631 | 008854 (8) | ref|XP_011091944.1| | 5e-22 | PREDICTED: remorin-like [Sesamum indicum] | |||||
| JMFN032O09 | Sequence | 625 | 008854 (8) | ref|XP_011091944.1| | 5e-41 | PREDICTED: remorin-like [Sesamum indicum] | |||||
| JMFN033I05 | Sequence | 618 | 008854 (8) | ref|XP_011091944.1| | 3e-33 | PREDICTED: remorin-like [Sesamum indicum] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF026H23- ATATTTATTAACACAGGAGCAAACAGGAGTGTCTGTCTATACAAAGAA
rJMFF004M16- ATATTTATTAACACAGGAGCAAACAGGAGTGTCTGTCTATACAAAGAA
____________________________________________________________
consensus ATATTTATTAACACAGGAGCAAACAGGAGTGTCTGTCTATACAAAGAA
. : . : . : . : . : . :
rJMFF026H23- CAGAGCTTGGGGAACACATCACAGCAAAGAACACAAAGAACAGAAAGTGGACAACATACG
rJMFF027G12- ACAAAGAACAGAAAGTGGACAACATACG
rJMFF004M16- CAGAGCTTGGGGAACACATCACAGCAAAGAACACAAAGAACAGAAAGTGGACAACATACG
____________________________________________________________
consensus CAGAGCTTGGGGAACACATCACAGCAAAGAACACAAAGAACAGAAAGTGGACAACATACG
. : . : . : . : . : . :
rJMFF026H23- ACACACGAAGAACAATAAAGTGAAGAAACACAACAATTCAATTTACAGCCATTGTTCAGA
rJMFF027G12- ACACACGAAGAACAATAAAGTGAAGAAACACAACAATTCAATTTACAGCCATTGTTCAGA
rJMFF004M16- ACACACGAAGAACAATAAAGTGAAGAAACACAACAATTCAATTTACAGCCATTGTTCAGA
____________________________________________________________
consensus ACACACGAAGAACAATAAAGTGAAGAAACACAACAATTCAATTTACAGCCATTGTTCAGA
. : . : . : . : . : . :
rJMFF026H23- CTTCAGATAGCCTTCATCACCCGAAGCATCCAAACGCCTTCTTGGGGACTTGTCCGGTTG
rJMFF027G12- CTTCAGATAGCCTTCATCACCCGAAGCATCCAAACGCCTTCTTGGGGACTTGTCCGGTTG
rJMFF004M16- CTTCAGATAGCCTTCATCACCCGAAGCATCCAAACGCCTTCTTGGGGACTTGTCCGGTTG
____________________________________________________________
consensus CTTCAGATAGCCTTCATCACCCGAAGCATCCAAACGCCTTCTTGGGGACTTGTCCGGTTG
. : . : . : . : . : . :
rJMFF026H23- CGCGGAACTTTGCAGCCATCTCCTCAGTCTTGAGAACTTGTTCATTTCTTTGGGAAACAA
rJMFF027G12- CGCGGAACTTTGCAGCCATCTCCTCAGTCTTGAGAACTTGTTCATTTCTTTGGGAAACAA
rJMFF004M16- CGCGGAACTTTGCAGCCATCTCCTCAGTCTTGAGAACTTGTTCATTTCTTTGGGAAACAA
JMFN032O09+ GGAACTTTGCAGCCATCTCCTCAGTCTTGAGAACTTGTTCATTTCTTTGGGAAACAA
JMFN033I05+ TTGGGAAACAA
____________________________________________________________
consensus CGCGGAACTTTGCAGCCATCTCCTCAGTCTTGAGAACTTGTTCATTTCTTTGGGAAACAA
. : . : . : . : . : . :
rJMFF026H23- TCACACTTCTCTTCTCTTCTGCTTCCTTATGAACCAAAGCTGTTTTGTTGCTCATCTTCT
rJMFF027G12- TCACACTTCTCTTCTCTTCTGCTTCCTTATGAACCAAAGCTGTTTTGTTGCTCATCTTCT
rJMFF004M16- TCACACTTCTCTTCTCTTCTGCTTCCTTATGAACCAAAGCTGTTTTGTTGCTCATCTTCT
JMFN032O09+ TCACACTTCTCTTCTCTTCTGCTTCCTTATGAACCAAAGATGTTTTGTTGCTCATCTTCT
JMFF026H23+ TTCTGCTTCCTTATGAACCAAAGCTGTTTTGTTGCTCATCTTCT
JMFN033I05+ TCACACTTCTCTTCTCTTCTGCTTCCTTATGAACCAAAGCTGTTTTGTTGCTCATCTTCT
JMFF042F07+ T
____________________________________________________________
consensus TCACACTTCTCTTCTCTTCTGCTTCCTTATGAACCAAAGCTGTTTTGTTGCTCATCTTCT
. : . : . : . : . : . :
rJMFF026H23- CTGCATATTCCGCTTTCTTCTTCTCTAGTTGTTCCTCAATCTTCTTCAGTTTTGCTTCAA
rJMFF027G12- CTGCATATTCCGCTTTCTTCTTCTCTAGTTGTTCCTCAATCTTCTTCAGTTTTGCTTCAA
rJMFF004M16- CTGCATATTCCGCTTTCTTCTTCTCTAGTTGTTCCTCAATCTTCTTCAGTTTTGCTTCAA
JMFN032O09+ CTGCATATTCCGCTTTCTTCTTCTCTAGTTGTTCCTCAATCTTCTTCAGTTTTGCTTCAA
JMFF026H23+ CTGCATATTCCGCTTTCTTCTTCTCTAGTTGTTCCTCAATCTTCTTCAGTTTTGCTTCAA
JMFN033I05+ CTGCATATTCCGCTTTCTTCTTCTCTAGTTGTTCCTCAATCTTCTTCAGTTTTGCTTCAA
JMFF042F07+ CTGCATATTCCGCTTTCTTCTTCTCTAGTGTNTCCTCAATCTTCTTCAGTTTTGCTTCAA
____________________________________________________________
consensus CTGCATATTCCGCTTTCTTCTTCTCTAGTTGTTCCTCAATCTTCTTCAGTTTTGCTTCAA
. : . : . : . : . : . :
rJMFF026H23- TATTTGCTTTTTTGGTGTTCTCCCAAGACAGTACATCAGCAAGCTTCTTCTGTGCCCTGT
rJMFF027G12- TATTTGCTTTTTTGGTGTTCTCCCAAGACAGTACATCAGCAAGCTTCTTCTGTGCCCTGT
rJMFF004M16- TATTTGCTTTTTTGGTGTTCTCCCAAGACAGTACATCAGCAAGCTTCTTCTGTGCCCTGT
JMFN032O09+ TATTTGCTTTTTTGGTGTTCTCCCAAGACAGTACATCAGCAAGCTTCTTCTGTGCCCTGT
JMFF026H23+ TATTTGCTTTTTTGGTGTTCTCCCAAGACAGTACATCAGCAAGCTTCTTCTGTGCCCTGT
JMFN033I05+ TATTTGCTTTTTTGGTGTTCTCCCAAGACAGTACATCAGCAAGCTTCTTCTGTGCCCTGT
JMFF042F07+ TATTTGCTTTTTTGGTGTTCTCCCAAGACAGTACATCAGCAAGCTTCTTCTGTGCCCTGT
____________________________________________________________
consensus TATTTGCTTTTTTGGTGTTCTCCCAAGACAGTACATCAGCAAGCTTCTTCTGTGCCCTGT
. : . : . : . : . : . :
rJMFF026H23- TCTCTACTTTGCTCTTTTCACTCTCTTCCCATGCCTTTATAAAGGATACTCTTTTGTCAT
rJMFF027G12- TCTCTACTTTGCTCTTTTCACTCTCTTCCCATGCCTTTATAAAGGATACTCTTTTGTCAT
rJMFF004M16- TCTCTACTTTGCTCTTTTCACTCTCTTCCCATGCCTTTATAAAGGATACTCTTTTGTCAT
JMFN032O09+ TCTCTACTTTGCTCTTTTCACTCTCTTCCCATGCCTTTATAAAGGATACTCTTTTGTCAT
JMFF026H23+ TCTCTACTTTGCTCTTTTCACTCTCTTCCCATGCCTTTATAAAGGATACTCTTTTGTCAT
JMFF004M16+ CCCATGCCTTTATAAAGGATACTCTTTTGTCAT
JMFN033I05+ TCTCTACTTTGCTCTTTTCACTCTCTTCCCATGCCTTTATAAAGGATACTCTTTTGTCAT
JMFF042F07+ TCTCTACTTTGCTCTTTTCACTCTCTTCCCATGCCTTTATAAAGGATACTCTTTTGTCAT
____________________________________________________________
consensus TCTCTACTTTGCTCTTTTCACTCTCTTCCCATGCCTTTATAAAGGATACTCTTTTGTCAT
. : . : . : . : . : . :
rJMFF026H23- CCTCAATCTTTGCAAGAGCAATGTCTCTGTCAAGGGATCCCTTAGAACCAGCTGTCTTCA
rJMFF027G12- CCTCAATCTTTGCAAGAGCAATGTCTCTGTCAAGGGATCCCTTANAACCAGCTGTCTTCA
rJMFF004M16- CCTCAATCTTTGCAAGAGCAATGTCTCTGTCAAGGGATCCCTTAGAACCAGCTGTCTTCA
JMFN032O09+ CCTCAATCTTTGCAAGAGCAATGTCTCTGTCAAGGGATCCCTTAGAACCAGCTGTCTTCA
JMFF026H23+ CCTCAATCTTTGCAAGAGCAATGTCTCTGTCAAGGGATCCCTTAGAACCAGCTGTCTTCA
JMFF004M16+ CCTCAATCTTTGCAAGAGCAATGTCTCTGTCAAGGGATCCCTTAGAACCAGCTGTCTTCA
JMFN033I05+ CCTCAATCTTTGCAAGAGCAATGTCTCTGTCAAGGGATCCCTTAGAACCAGCTGTCTTCA
JMFF042F07+ CCTCAATCTTTGCAAGAGCAATGTCTCTGTCAAGGGATCCCTTAGAACCAGCTGTCTTCA
____________________________________________________________
consensus CCTCAATCTTTGCAAGAGCAATGTCTCTGTCAAGGGATCCCTTAGAACCAGCTGTCTTCA
. : . : . : . : . : . :
rJMFF026H23- ATGGAGGATCAGGATTCTTGTGAGGGACAACAGCTTTCTCTGGGGAAACATCTTTGGTGG
rJMFF027G12- ATGGAGGATCACGATTCTTGTGA
rJMFF004M16- ATGGAGGATCAGGATTCTTGTGAGGGACAACAGCTTTCTCTGGGGAAACATCTTTGGTGG
JMFN032O09+ ATGGAGGATCAGGATTCTTGTGAGGGACAACAGCTTTCTCTGGGGAAACATCTTTGGTGG
JMFF026H23+ ATGGAGGATCAGGATTCTTGTGAGGGACAACAGCTTTCTCTGGGGAAACATCTTTGGTGG
JMFF004M16+ ATGGAGGATCAGGATTCTTGTGAGGGACAACAGCTTTCTCTGGGGAAACATCTTTGGTGG
JMFN033I05+ ATGGAGGATCAGGATTCTTGTGAGGGACAACAGCTTTCTCTGGGGAAACATCTTTGGTGG
JMFF042F07+ ATGGAGGATCAGGATTCTTGTGAGGGACAACAGCTTTCTCTGGGGAAACATCTTTGGTGG
____________________________________________________________
consensus ATGGAGGATCAGGATTCTTGTGAGGGACAACAGCTTTCTCTGGGGAAACATCTTTGGTGG
. : . : . : . : . : . :
rJMFF026H23- GGCCCATGTTTTGAGGGGCGGCGACGG
rJMFF004M16- GGCCCATGTTTTGAGGGGCGGCGACGGCGACGGAA
JMFN032O09+ GGCCCATGTTTTGAGGGGCGGCGACGGCGACGGAAGTGAGAGGTGGTTCTTCTGGTGCAA
JMFF026H23+ GGCCCATGTTTTGAGGGGCGGCGACGGCGACGGAAGTGAGAGGTGGTTCTTCTGGCGCAA
JMFF004M16+ GGCCCATGTTTTGAGGGGCGGCGACGGCGACGGAAGTGAGAGGTGGTTCTTCTGGCGCAA
JMFN033I05+ GGCCCATGTTTTGAGGGGCGGCGACGGCGACGGAAGTGAGAGGTGGTTCTTCTGGTGCAA
JMFF042F07+ GGCCCATGTTTTGAGGGGCGGCGACGGCGACGGAAGTGAGAGGTGGTTCTTCTGGTGCAA
____________________________________________________________
consensus GGCCCATGTTTTGAGGGGCGGCGACGGCGACGGAAGTGAGAGGTGGTTCTTCTGGTGCAA
. : . : . : . : . : . :
JMFN032O09+ GAACGGCGGCGGGCGGAGGAGGAGCAACCACTTTCTCCGCCACAACTGGCGCAGCTGCTG
JMFF026H23+ GAACGGCGGCGGGCGGAGGAGGAGCAACCACTTTCTCCGCCACAACTGGCGCAGCTGCTG
JMFF004M16+ GAACGGCGGCGGGCGGAGGAGGAGCAACCACTTTCTCCGCCACAACTGGCGCAGCTGCTG
JMFN033I05+ GAACGGCGGCGGGCGGAGGAGGAGCAACCACTTTCTCCGCCACAACTGGCGCAGCTGCTG
JMFF042F07+ GAACGGCGGCGGGCGGAGGAGGAGCAACCACTTTCTCCGCCACAACTGGCGCAGCTGCTG
____________________________________________________________
consensus GAACGGCGGCGGGCGGAGGAGGAGCAACCACTTTCTCCGCCACAACTGGCGCAGCTGCTG
. : . : . : . : . : . :
JMFN032O09+ CCATTTTTATACACAAGAAAGGAAGGAAACACGACAAAGAAGCTAGCTAGCTTTGAATTA
JMFF026H23+ CCATTTTTATACACAAGAAAGGAAGGAAACACGACAAAGAAGCTAGCTAGCTTTGAATTA
JMFF004M16+ CCATTTTTATACACAAGAAAGGAAGGAAACACGACAAAGAAGCTAGCTAGCTTTGAATTA
JMFN033I05+ CCATTTTTATACACAAGAAAGGAAGGAAACACGACAAAGAAGCTAGCTAGCTTTGAATTA
JMFF042F07+ CCATTTTTATACACAAGAAAGGAAGGAAACACGACAAAGAAGCTAGCTAGCTTTGAATTA
____________________________________________________________
consensus CCATTTTTATACACAAGAAAGGAAGGAAACACGACAAAGAAGCTAGCTAGCTTTGAATTA
. : . : . : . : . : . :
JMFN032O09+ AAGCTACAAAGAATGATTCTTAGCTTCT
JMFF026H23+ AAGCTACAAAGAATGATTCTTAGCTTCTTCGATCAATTTATTCCGGACGAATC
JMFF004M16+ AAGCTACAAAGAATGATTCTTAGCTTCTTCGATCAATTTATTCCGGACGAATC
JMFN033I05+ AAGCTACAAAGAATGATTCTTAGCTTCTTCGATCAATTTATTCAGGACGAATCATGCATT
JMFF042F07+ AAGCTACAAAGAATGATTCTTAGCTTCTTCGATCAATTTATTCAGGACGAATCATGCATT
____________________________________________________________
consensus AAGCTACAAAGAATGATTCTTAGCTTCTTCGATCAATTTATTCCGGACGAATCATGCATT
. : . : . : . : . : . :
JMFN033I05+ AATACCA
JMFF042F07+ AATACCAGCATGCGTTGTATATATCATTCAGATTTCTTTTTTGGTATCAATCTTCCATAT
____________________________________________________________
consensus AATACCAGCATGCGTTGTATATATCATTCAGATTTCTTTTTTGGTATCAATCTTCCATAT