Contig 008851:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006O08Sequence503008851 (2)gb|KHN41889.1|2e-7526S proteasome non-ATPase regulatory subunit 4 [Glycine soja]778021226ref|XP_010316429.1|2e-57PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X2 [S
JMFF041G17Sequence647008851 (2)emb|CDP01880.1|9e-111unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF041G17+                        TGCTATCATTGTTGTTTACAGTGGCAACCAGTGCCTCAAGCTTCTCA
                      ____________________________________________________________
consensus                          TGCTATCATTGTTGTTTACAGTGGCAACCAGTGCCTCAAGCTTCTCA
 
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JMFF041G17+           GTTTTCCCTTCATCTTCTTCACCANAGTTTACAACATCCAGAGATACACTGTTCTTTTTT
                      ____________________________________________________________
consensus             GTTTTCCCTTCATCTTCTTCACCANAGTTTACAACATCCAGAGATACACTGTTCTTTTTT
 
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JMFF006O08+                                                                   AAAA
JMFF041G17+           AACTTTTTCCCAATCATCTCCAATACCTTCTTGTCATATGTGACAGGACTCCCAGCAAAA
                      ____________________________________________________________
consensus             AACTTTTTCCCAATCATCTCCAATACCTTCTTGTCATATGTGACAGGACTCCCAGCAAAA
 
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JMFF006O08+           ACAATAATCCTTTGTTGTTGCTTTTTGTTTTGGCGATGCTTGAGGGCCAACTGAGCTACC
JMFF041G17+           ACAATAATCCTTTGTTGTTGCTTTTTGTTTTGGCGATGCTTGAGGGCCAACTGAGCTACC
                      ____________________________________________________________
consensus             ACAATAATCCTTTGTTGTTGCTTTTTGTTTTGGCGATGCTTGAGGGCCAACTGAGCTACC
 
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JMFF006O08+           TGAATTCCAGCTGCCAAATTCATTTCACCTCCTATTTCCAGTCCGTGCATGCAAGCTAAG
JMFF041G17+           TGAATTCCAGCTGCCAAATTCATTTCACCTCCTATTTCCAGTCCGTGCATGCAAGCTAAG
                      ____________________________________________________________
consensus             TGAATTCCAGCTGCCAAATTCATTTCACCTCCTATTTCCAGTCCGTGCATGCAAGCTAAG
 
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JMFF006O08+           ATCTTCCCGAGATCACTGGTAGGAGTAACTAAAACACGAACCCCTTTGCCAGCCATCGTC
JMFF041G17+           ATCTTCCCGAGATCACTGGTAGGAGTAACTAAAACACGAACCCCTTTGCCAGCCATCGTC
                      ____________________________________________________________
consensus             ATCTTCCCGAGATCACTGGTAGGAGTAACTAAAACACGAACCCCTTTGCCAGCCATCGTC
 
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JMFF006O08+           AATACCCCAACCGTATTCTCCGGATTAGCCTGAGTTTTTGCCCCACAGATGAGATTAACG
JMFF041G17+           AATACCCCAACCGTATTCTCCGGATTAGCCTGAGTTTTTGCCCCACAGATGAGATTAACG
                      ____________________________________________________________
consensus             AATACCCCAACCGTATTCTCCGGATTAGCCTGAGTTTTTGCCCCACAGATGAGATTAACG
 
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JMFF006O08+           GCGTCAGCCTGAGCTTGAAATCTACTGGGCGAGTAATCTCCATTTCGCATCCACTCCGAA
JMFF041G17+           GCGTCAGCCTGAGCTTGAAATCTACTGGGCGAGTAATCTCCATTTCGCATCCACTCCGAA
                      ____________________________________________________________
consensus             GCGTCAGCCTGAGCTTGAAATCTACTGGGCGAGTAATCTCCATTTCGCATCCACTCCGAA
 
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JMFF006O08+           TTGTCGATGCAGATCATCGTTGCCTCGAGCACCATGTTTACAGAATTAACACGAAATAGA
JMFF041G17+           TTGTCGATGCAGATCATCGTTGCCTCGAGCACCATGTTTACAGAATTAACACGAAATAGA
                      ____________________________________________________________
consensus             TTGTCGATGCAGATCATCGTTGCCTCGAGCACCATGTTTACAGAATTAACACGAAATAGA
 
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JMFF006O08+           GTTTAAGGATGGCGTGATTAAATCGCAGAGCGCCTGTTTTGTATACTCCGTATATGTTTC
JMFF041G17+           GTTTAAGGATGGCGTGATTAAATCGCAGAGCGCCTGTTTTGTATACTCCGTATATGTTTC
                      ____________________________________________________________
consensus             GTTTAAGGATGGCGTGATTAAATCGCAGAGCGCCTGTTTTGTATACTCCGTATATGTTTC
 
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JMFF006O08+           CTCCTTTGCACGCCAGAAGGAATTCCGGTTTTCGTTTCCTTTATGAT             
JMFF041G17+           CTCCTTTGCACGCCAGAAGGAATTCCGGTTTTCGTTTCCTTTATGATGAGGTCACTTTCT
                      ____________________________________________________________
consensus             CTCCTTTGCACGCCAGAAGGAATTCCGGTTTTCGTTTCCTTTATGATGAGGTCACTTTCT