Contig 008849:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF040H12+                           TTCATCGGGACGGGTCTGGGTCCGAGATAGCTCAAACAGGAGCT
                      ____________________________________________________________
consensus                             TTCATCGGGACGGGTCTGGGTCCGAGATAGCTCAAACAGGAGCT
 
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JMSF040H12+           CGGTTGTTGCCGAGGAAGAACAACAGAGGATGAAGCTAAGGATTGTTCCTGGTTTTGCAG
                      ____________________________________________________________
consensus             CGGTTGTTGCCGAGGAAGAACAACAGAGGATGAAGCTAAGGATTGTTCCTGGTTTTGCAG
 
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JMSF040H12+           ATGGATCTGGGCTTGAATTTGAAGGATCTGAGATGGGGTGAGCTGGTTTAGCCCAATCGG
                      ____________________________________________________________
consensus             ATGGATCTGGGCTTGAATTTGAAGGATCTGAGATGGGGTGAGCTGGTTTAGCCCAATCGG
 
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JMSF040H12+           ACCTCTTTGCTCAAACCCCATACTCTCAAAACCCGAAAACATCCCGGCGGCCGCCGGGAT
                      ____________________________________________________________
consensus             ACCTCTTTGCTCAAACCCCATACTCTCAAAACCCGAAAACATCCCGGCGGCCGCCGGGAT
 
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JMSF040H12+           CGGGGTAAATTCATGGTACAGATATGGATCCGTTGAGAAAGAAGATTCAAACGGATAGTA
                      ____________________________________________________________
consensus             CGGGGTAAATTCATGGTACAGATATGGATCCGTTGAGAAAGAAGATTCAAACGGATAGTA
 
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JMSF040H12+           CGAGGAAGAAGAAGAAGGGGGAGAAGAAGATGAAAAAGAAGAAGAAGAAGGGGGAGGAGA
JMFS134D03+                AAGAAGAAGAAGGGGGAGAAGAAGATGAAAAAGAAGAAGAAGAAGGGGGAGGAGA
                      ____________________________________________________________
consensus             CGAGGAAGAAGAAGAAGGGGGAGAAGAAGATGAAAAAGAAGAAGAAGAAGGGGGAGGAGA
 
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JMSF040H12+           AGAAGCACCTTTCATAAAAGGTTCAAGTGCCTTCATGAGTTCTTCTCTAAAGGGATCTAT
JMFS134D03+           AGAAGCACCTTTCATAAAAGGTTCAAGTGCCTTCATGAGTTCTTCTCTAAAGGGATCTAT
                      ____________________________________________________________
consensus             AGAAGCACCTTTCATAAAAGGTTCAAGTGCCTTCATGAGTTCTTCTCTAAAGGGATCTAT
 
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JMSF040H12+           ATATACGGGACTGCTGCTATTGTATATATCTATAGCTGCTGCCATGGCTTCTCAAAAGTC
JMFS134D03+           ATATACGGGACTGCTGCTATTGTATATATCTATAGCTGCTGCCATGGCTTCTCAAAAGTC
JMSF019C19+                                                              TCAAAAGTC
                      ____________________________________________________________
consensus             ATATACGGGACTGCTGCTATTGTATATATCTATAGCTGCTGCCATGGCTTCTCAAAAGTC
 
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JMSF040H12+           AAAACACACACAGAAAAAACAGAGATCTGAAGAAAATCAAAAGATCACAAAACAAGAAAC
JMFS134D03+           AAAACACACACAGAAAAAACAGAGATCTGAAGAAAATCAAAAGATCACAAAACAAGAAAC
JMSF019C19+           AAAACCCCCCCCGAAAAAACAGNGATNTGAAGAAAATCAAAAGNTCCCAAAACAAGNAAC
JMSF047H13+                                                                    AAC
JMSF001J18+                                                               CAAGNAAC
JMSF030L03+                                            AAATCAAAAGNTCCCAAAACNAGNAAC
                      ____________________________________________________________
consensus             AAAACACACACAGAAAAAACAGAGATCTGAAGAAAATCAAAAGATCCCAAAACAAGAAAC
 
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JMSF040H12+           CCTGCAGAAAATCAAGAACCTGAGGGATAGAAAAACAGACCCTCCTGGTTGTTTTAATCA
JMFS134D03+           CCTGCAGAAAATCAAGAACCTGAGGGATAGAAAAACAGACCCTCCTGGTTGTTTTAATCA
JMSF019C19+           CCTGCNGAAAATCNAGAACCTGNGGGNTAGAAAAACNGNCCCTCCTGGTTGTTTTAATCA
JMSF047H13+           CCTGCNGAAAATCNAGNACCTGNGGGNTAGAAAAACNGNCCCTCCTGGTTGTTTTAATCA
JMSF001J18+           CCTGCAGAAAATCAAGAACCTGNGGGATAGAAAAACAGACCCTCCTGGTTGTTTTAATCA
JMSF030L03+           CCTGCNGAAAATCAAGAACCTGNGGGNTAGAAAAACNGNCCCTCCTGGTTGTTTTAATCA
JMFF040L21+             TGCAGAAAATCAAGAACCTGNGGGATAGAAAAACNGACCCTCCTGGTTGTTTTAATCA
                      ____________________________________________________________
consensus             CCTGCAGAAAATCAAGAACCTGAGGGATAGAAAAACAGACCCTCCTGGTTGTTTTAATCA
 
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JMSF040H12+           AAAGATTTATACTATAATCAAG                                      
JMFS134D03+           AAAGATTTATACTATAATCAAGCTAAAAAAAAAATAAAAATGGATCTCTATTCTGAATCA
JMSF019C19+           AAAGNTTTNTNCTATNATCNAGNTAAAAAAAAAATAAAAATGGATCTCTATTNTGAATCA
JMSF047H13+           AAAGNTTTNTNCTATAATCNAGNTAAAAAAAAAATAAAAATGGATCTCTATTNTGAATCN
JMSF001J18+           AAAGATTTATACTATAATCAAGNTAAAAAAAAAATAAAAATGGATCTCTATTCTGAATCN
JMSF030L03+           AAAGNTTTNTNCTATNATCNAGNTAAAAAAAAAATAAAAATGGATCTCTATTNTGAATCA
JMFF040L21+           AAAGATTTATNCTATAATCAAGNTAAAAAAAAAATAAAAATGGATCTCTATTNTGAATCA
                      ____________________________________________________________
consensus             AAAGATTTATACTATAATCAAGCTAAAAAAAAAATAAAAATGGATCTCTATTCTGAATCA
 
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JMFS134D03+           CCTGGCTTTCAAAAAATCAACCACCACCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
JMSF019C19+           CCTGGCTTTCAAAAAATCAACCACCACCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
JMSF047H13+           CCTGGCTTTCAAAAAATCAACCNCCNCCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
JMSF001J18+           CCTGGCTTTCAAAAAATCAACCNCCNCCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
JMSF030L03+           CCTGGCTTTCAAAAAATCAACCNCCACCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
JMFF040L21+           CCTGGCTTTCAAAAAATCAACCNCCACCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
                      ____________________________________________________________
consensus             CCTGGCTTTCAAAAAATCAACCACCACCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
 
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JMFS134D03+           GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTCTGAAAATTTC
JMSF019C19+           GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTNTGAAAATTTC
JMSF047H13+           GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTNTGAAAATTTC
JMSF001J18+           GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTNTGAAAATTTC
JMSF030L03+           GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTNTGAAAATTTC
JMFF040L21+           GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTCTGAAAATTTC
                      ____________________________________________________________
consensus             GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTCTGAAAATTTC
 
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JMFS134D03+           TTAAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATG               
JMSF019C19+           TTGAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATGTTAGAGAGGGGGAAG
JMSF047H13+           TTGAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATGTTAGAGAGGGGGAAG
JMSF001J18+           TTGAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATGTTAGAGAGGGGGAAG
JMSF030L03+           TTGAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATGTTAGAGAGGGGGAAG
JMFF040L21+           TTGAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATGTTAGAGAGGGGGAAG
                      ____________________________________________________________
consensus             TTGAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATGTTAGAGAGGGGGAAG
 
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JMSF019C19+           AAAAAAAAATTAAAATCACTCTTTTTTTTTAGATTGCCTCACTGAATTTTTCGCTC    
JMSF047H13+           AAAAAAAAATTAAAATCACTCTTTTTTTTTAGATTGCCTCACTGAATTTTTCGCTC    
JMSF001J18+           AAAAAAAAATTAAAATCACTCTTTTTTTTTAGATTGCCTCACTGAATTTTTCGCTC    
JMSF030L03+           AAAAAAAAATTAAAATCACTCTTTTTTTTTAGATTGCCTCACTGAATTTTTCGCTC    
JMFF040L21+           AAAAAAAAATTAAAATCACTCTTTTTTTTTAGATTGCCTCACTGAATTTTTCGCTCTGGT
                      ____________________________________________________________
consensus             AAAAAAAAATTAAAATCACTCTTTTTTTTTAGATTGCCTCACTGAATTTTTCGCTCTGGT