Contig 008849:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040L21Sequence358008849 (7)239002656 (3)
JMFS134D03Sequence639008849 (7)gb|ABY63297.1|1e-07DREB protein [Populus pruinosa]
JMSF001J18Sequence367008849 (7)130002656 (3)
JMSF019C19Sequence427008849 (7)
JMSF030L03Sequence428008849 (7)
JMSF040H12Sequence609008849 (7)gb|ABY63297.1|2e-15DREB protein [Populus pruinosa]
JMSF047H13Sequence441008849 (7)223002656 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF040H12+ TTCATCGGGACGGGTCTGGGTCCGAGATAGCTCAAACAGGAGCT
                      ____________________________________________________________
consensus TTCATCGGGACGGGTCTGGGTCCGAGATAGCTCAAACAGGAGCT
 
. : . : . : . : . : . :
JMSF040H12+ CGGTTGTTGCCGAGGAAGAACAACAGAGGATGAAGCTAAGGATTGTTCCTGGTTTTGCAG
                      ____________________________________________________________
consensus CGGTTGTTGCCGAGGAAGAACAACAGAGGATGAAGCTAAGGATTGTTCCTGGTTTTGCAG
 
. : . : . : . : . : . :
JMSF040H12+ ATGGATCTGGGCTTGAATTTGAAGGATCTGAGATGGGGTGAGCTGGTTTAGCCCAATCGG
                      ____________________________________________________________
consensus ATGGATCTGGGCTTGAATTTGAAGGATCTGAGATGGGGTGAGCTGGTTTAGCCCAATCGG
 
. : . : . : . : . : . :
JMSF040H12+ ACCTCTTTGCTCAAACCCCATACTCTCAAAACCCGAAAACATCCCGGCGGCCGCCGGGAT
                      ____________________________________________________________
consensus ACCTCTTTGCTCAAACCCCATACTCTCAAAACCCGAAAACATCCCGGCGGCCGCCGGGAT
 
. : . : . : . : . : . :
JMSF040H12+ CGGGGTAAATTCATGGTACAGATATGGATCCGTTGAGAAAGAAGATTCAAACGGATAGTA
                      ____________________________________________________________
consensus CGGGGTAAATTCATGGTACAGATATGGATCCGTTGAGAAAGAAGATTCAAACGGATAGTA
 
. : . : . : . : . : . :
JMSF040H12+ CGAGGAAGAAGAAGAAGGGGGAGAAGAAGATGAAAAAGAAGAAGAAGAAGGGGGAGGAGA
JMFS134D03+ AAGAAGAAGAAGGGGGAGAAGAAGATGAAAAAGAAGAAGAAGAAGGGGGAGGAGA
                      ____________________________________________________________
consensus CGAGGAAGAAGAAGAAGGGGGAGAAGAAGATGAAAAAGAAGAAGAAGAAGGGGGAGGAGA
 
. : . : . : . : . : . :
JMSF040H12+ AGAAGCACCTTTCATAAAAGGTTCAAGTGCCTTCATGAGTTCTTCTCTAAAGGGATCTAT
JMFS134D03+ AGAAGCACCTTTCATAAAAGGTTCAAGTGCCTTCATGAGTTCTTCTCTAAAGGGATCTAT
                      ____________________________________________________________
consensus AGAAGCACCTTTCATAAAAGGTTCAAGTGCCTTCATGAGTTCTTCTCTAAAGGGATCTAT
 
. : . : . : . : . : . :
JMSF040H12+ ATATACGGGACTGCTGCTATTGTATATATCTATAGCTGCTGCCATGGCTTCTCAAAAGTC
JMFS134D03+ ATATACGGGACTGCTGCTATTGTATATATCTATAGCTGCTGCCATGGCTTCTCAAAAGTC
JMSF019C19+ TCAAAAGTC
                      ____________________________________________________________
consensus ATATACGGGACTGCTGCTATTGTATATATCTATAGCTGCTGCCATGGCTTCTCAAAAGTC
 
. : . : . : . : . : . :
JMSF040H12+ AAAACACACACAGAAAAAACAGAGATCTGAAGAAAATCAAAAGATCACAAAACAAGAAAC
JMFS134D03+ AAAACACACACAGAAAAAACAGAGATCTGAAGAAAATCAAAAGATCACAAAACAAGAAAC
JMSF019C19+ AAAACCCCCCCCGAAAAAACAGNGATNTGAAGAAAATCAAAAGNTCCCAAAACAAGNAAC
JMSF047H13+ AAC
JMSF001J18+ CAAGNAAC
JMSF030L03+ AAATCAAAAGNTCCCAAAACNAGNAAC
                      ____________________________________________________________
consensus AAAACACACACAGAAAAAACAGAGATCTGAAGAAAATCAAAAGATCCCAAAACAAGAAAC
 
. : . : . : . : . : . :
JMSF040H12+ CCTGCAGAAAATCAAGAACCTGAGGGATAGAAAAACAGACCCTCCTGGTTGTTTTAATCA
JMFS134D03+ CCTGCAGAAAATCAAGAACCTGAGGGATAGAAAAACAGACCCTCCTGGTTGTTTTAATCA
JMSF019C19+ CCTGCNGAAAATCNAGAACCTGNGGGNTAGAAAAACNGNCCCTCCTGGTTGTTTTAATCA
JMSF047H13+ CCTGCNGAAAATCNAGNACCTGNGGGNTAGAAAAACNGNCCCTCCTGGTTGTTTTAATCA
JMSF001J18+ CCTGCAGAAAATCAAGAACCTGNGGGATAGAAAAACAGACCCTCCTGGTTGTTTTAATCA
JMSF030L03+ CCTGCNGAAAATCAAGAACCTGNGGGNTAGAAAAACNGNCCCTCCTGGTTGTTTTAATCA
JMFF040L21+ TGCAGAAAATCAAGAACCTGNGGGATAGAAAAACNGACCCTCCTGGTTGTTTTAATCA
                      ____________________________________________________________
consensus CCTGCAGAAAATCAAGAACCTGAGGGATAGAAAAACAGACCCTCCTGGTTGTTTTAATCA
 
. : . : . : . : . : . :
JMSF040H12+ AAAGATTTATACTATAATCAAG
JMFS134D03+ AAAGATTTATACTATAATCAAGCTAAAAAAAAAATAAAAATGGATCTCTATTCTGAATCA
JMSF019C19+ AAAGNTTTNTNCTATNATCNAGNTAAAAAAAAAATAAAAATGGATCTCTATTNTGAATCA
JMSF047H13+ AAAGNTTTNTNCTATAATCNAGNTAAAAAAAAAATAAAAATGGATCTCTATTNTGAATCN
JMSF001J18+ AAAGATTTATACTATAATCAAGNTAAAAAAAAAATAAAAATGGATCTCTATTCTGAATCN
JMSF030L03+ AAAGNTTTNTNCTATNATCNAGNTAAAAAAAAAATAAAAATGGATCTCTATTNTGAATCA
JMFF040L21+ AAAGATTTATNCTATAATCAAGNTAAAAAAAAAATAAAAATGGATCTCTATTNTGAATCA
                      ____________________________________________________________
consensus AAAGATTTATACTATAATCAAGCTAAAAAAAAAATAAAAATGGATCTCTATTCTGAATCA
 
. : . : . : . : . : . :
JMFS134D03+ CCTGGCTTTCAAAAAATCAACCACCACCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
JMSF019C19+ CCTGGCTTTCAAAAAATCAACCACCACCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
JMSF047H13+ CCTGGCTTTCAAAAAATCAACCNCCNCCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
JMSF001J18+ CCTGGCTTTCAAAAAATCAACCNCCNCCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
JMSF030L03+ CCTGGCTTTCAAAAAATCAACCNCCACCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
JMFF040L21+ CCTGGCTTTCAAAAAATCAACCNCCACCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
                      ____________________________________________________________
consensus CCTGGCTTTCAAAAAATCAACCACCACCTGTAATCTGGCTTGTTTTTAACGAAAATTTCA
 
. : . : . : . : . : . :
JMFS134D03+ GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTCTGAAAATTTC
JMSF019C19+ GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTNTGAAAATTTC
JMSF047H13+ GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTNTGAAAATTTC
JMSF001J18+ GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTNTGAAAATTTC
JMSF030L03+ GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTNTGAAAATTTC
JMFF040L21+ GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTCTGAAAATTTC
                      ____________________________________________________________
consensus GTATTAATCAAAACCCAAAACCAAGAAAAACAAACCGTTTTTAAAATCTCTGAAAATTTC
 
. : . : . : . : . : . :
JMFS134D03+ TTAAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATG
JMSF019C19+ TTGAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATGTTAGAGAGGGGGAAG
JMSF047H13+ TTGAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATGTTAGAGAGGGGGAAG
JMSF001J18+ TTGAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATGTTAGAGAGGGGGAAG
JMSF030L03+ TTGAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATGTTAGAGAGGGGGAAG
JMFF040L21+ TTGAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATGTTAGAGAGGGGGAAG
                      ____________________________________________________________
consensus TTGAAAGACAGACGATGACAGAAAGGGATCTCAAGAAGCGGGATGTTAGAGAGGGGGAAG
 
. : . : . : . : . : . :
JMSF019C19+ AAAAAAAAATTAAAATCACTCTTTTTTTTTAGATTGCCTCACTGAATTTTTCGCTC
JMSF047H13+ AAAAAAAAATTAAAATCACTCTTTTTTTTTAGATTGCCTCACTGAATTTTTCGCTC
JMSF001J18+ AAAAAAAAATTAAAATCACTCTTTTTTTTTAGATTGCCTCACTGAATTTTTCGCTC
JMSF030L03+ AAAAAAAAATTAAAATCACTCTTTTTTTTTAGATTGCCTCACTGAATTTTTCGCTC
JMFF040L21+ AAAAAAAAATTAAAATCACTCTTTTTTTTTAGATTGCCTCACTGAATTTTTCGCTCTGGT
                      ____________________________________________________________
consensus AAAAAAAAATTAAAATCACTCTTTTTTTTTAGATTGCCTCACTGAATTTTTCGCTCTGGT