Contig 008844:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039O17Sequence382008844 (2)gb|ABZ04080.1|2e-26chloroplast heat shock protein 70-1 [Ipomoea nil]687014901gb|ABZ04080.1|3e-56chloroplast heat shock protein 70-1 [Ipomoea nil]
JMFS106G09Sequence627008844 (2)gb|ABZ04080.1|2e-90chloroplast heat shock protein 70-1 [Ipomoea nil]

Alignment

This contig is upended


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JMFS106G09+                                 AACCTGCTTAGACTCCTCATCCACCTCCGACATCTTCC
                      ____________________________________________________________
consensus                                   AACCTGCTTAGACTCCTCATCCACCTCCGACATCTTCC
 
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JMFS106G09+           TCCCAATAAACCTCTTCACCGAGAAAAACGTGTTCTCGGGATTCACCACGGCCTGGCGCT
                      ____________________________________________________________
consensus             TCCCAATAAACCTCTTCACCGAGAAAAACGTGTTCTCGGGATTCACCACGGCCTGGCGCT
 
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JMFS106G09+           TCGCAATCTGCCCAACAAGCCTATCCCCGTTCTTTGTGTAGGCCACCACAGAAGGCGTAG
                      ____________________________________________________________
consensus             TCGCAATCTGCCCAACAAGCCTATCCCCGTTCTTTGTGTAGGCCACCACAGAAGGCGTAG
 
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JMFS106G09+           TCCTCTGCCCTTCCGCATTCGTCACGATGGTCGGCTTCCCCCCTTCCATCACCGCCACGG
                      ____________________________________________________________
consensus             TCCTCTGCCCTTCCGCATTCGTCACGATGGTCGGCTTCCCCCCTTCCATCACCGCCACGG
 
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JMFS106G09+           CGGAGTTAGTCGTCCCGAGGTCAATACCAACCACCTTCTCCGCCACAATACGCAACCGCG
JMFF039O17+                                                 TCCGCCACAATACGCAACCGCG
                      ____________________________________________________________
consensus             CGGAGTTAGTCGTCCCGAGGTCAATACCAACCACCTTCTCCGCCACAATACGCAACCGCG
 
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JMFS106G09+           TCCCGCCTGCATTTCCCCGACTCTTCTTCAGCTTGAGTCCGAAGGGCACGGTCCTACAGC
JMFF039O17+           TCCCGCCTGCATTTCCCCGACTCTTCTTCAGCTTGAGTCCGAAGGGCACGGTCCTACAGC
                      ____________________________________________________________
consensus             TCCCGCCTGCATTTCCCCGACTCTTCTTCAGCTTGAGTCCGAAGGGCACGGTCCTACAGC
 
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JMFS106G09+           TCACTCTCTGCCCAAAAAACACCGTTCTCGATCGACCAGTTGCAAATTGAGTAGCTCCGA
JMFF039O17+           TCACTCTCTGCCCAAAAAACACCGTTCTCGATCGACCAGTTGCAAATTGAGTAGCTCCGA
                      ____________________________________________________________
consensus             TCACTCTCTGCCCAAAAAACACCGTTCTCGATCGACCAGTTGCAAATTGAGTAGCTCCGA
 
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JMFS106G09+           GAGCGTGAATTTGAGCCGTGGATGACGCCATCAATTAAACCAGGAAACTGCAACAAAATT
JMFF039O17+           GAGCGTGAATTTGAGCCGTGGATGACGCCATCAATTAAACCAGGAAACTGCAACAAAATT
                      ____________________________________________________________
consensus             GAGCGTGAATTTGAGCCGTGGATGACGCCATCAATTAAACCAGGAAACTGCAACAAAATT
 
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JMFS106G09+           CACTACTTCTTGTCTTGTATATAAGCGACCAAGCAGGTGCGTTTATGTATAAGTCAAAAT
JMFF039O17+           CACTACTTCTTGTCTNGTATATAAGCGACCAAGCAGGTGCGTTTANGTATAAGTCAAAAT
                      ____________________________________________________________
consensus             CACTACTTCTTGTCTTGTATATAAGCGACCAAGCAGGTGCGTTTATGTATAAGTCAAAAT
 
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JMFS106G09+           ATAATTTTGTGTAGAGACTAGAGAGAGATGAGAGCTAGGGTTTTGAATGGAGGAGAAGCC
JMFF039O17+           ATAATTNTGTGTAGAGACTAGAGAGAGATGAGAGNTAGGGTTTTGAATGGAGGAGAAGCC
                      ____________________________________________________________
consensus             ATAATTTTGTGTAGAGACTAGAGAGAGATGAGAGCTAGGGTTTTGAATGGAGGAGAAGCC
 
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JMFS106G09+           TCAACCCTGTATAGCTGTGTAGAGAGGTCGGAAACGGATTTAGTGTCGA           
JMFF039O17+           TCAACCCTGTATAGCTGTGTAGAGAGGTCGGAAACGGATTTAGTGTCGAGAGAGCAGAGG
                      ____________________________________________________________
consensus             TCAACCCTGTATAGCTGTGTAGAGAGGTCGGAAACGGATTTAGTGTCGAGAGAGCAGAGG