Contig 008843:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF007N10+                                                             TTAGCATTAA
JMFF038P22+                                 TTTTTTTTAAGTAACAAAGCAAAAGGAGTTAGCANTAA
                      ____________________________________________________________
consensus                                   TTTTTTTTAAGTAACAAAGCAAAAGGAGTTAGCATTAA
 
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rJMFF007N10-                                                                   AAG
JMFF007N10+           ATTCTCCATAAATTTCTCTNGGCAGACAATTTAGCCATCCACAAAACNTAGTTACAGAAG
JMFF038P22+           ATTCTCCATAAATTTCTCTNGGCAGACAATTTAGCCATCCACAAAACCTAGTTACAGAAG
                      ____________________________________________________________
consensus             ATTCTCCATAAATTTCTCTNGGCAGACAATTTAGCCATCCACAAAACCTAGTTACAGAAG
 
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rJMFF007N10-          GATTATAACTTANAAGGCAAGATACACCANACGNNAGATGGCAAANAATANTGNCATCAG
JMFF007N10+           GATTATAACTTAGAAGGCAAGATACACCAAACAAAAGATGGCAAACAATAGTGCCATCAG
JMFF038P22+           GATTATANCTTAGAAGGCAAGATACACCAAACAAAAGATGGCAAACAATAGTGCCATCAG
                      ____________________________________________________________
consensus             GATTATAACTTAGAAGGCAAGATACACCAAACAAAAGATGGCAAACAATAGTGCCATCAG
 
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rJMFF007N10-          GTTAAGGATCNCGATCTGGAATCCANCAAAGACANNNGCTACTACTACTTCATTGCTGGA
JMFF007N10+           GTTAAGGATCACGATCTGGAATCCAACAAAGACAAAGGCTACTACTACTTCATTGCTGGA
JMFF038P22+           GTTAAGGATCACGATCTGGAATCCAACAAAGACAAAGGNTACTACTACTTCATTGCTGGA
                      ____________________________________________________________
consensus             GTTAAGGATCACGATCTGGAATCCAACAAAGACAAAGGCTACTACTACTTCATTGCTGGA
 
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rJMFF007N10-          CCATTGCTCANTGCTCAACCTTACAAGCATCNGGCNCATGANGTCCATACTTTGCTAATT
JMFF007N10+           CCATTGCTCAGTGCTCAACCTTAGAAGCATCAGGCACATGAGGTCCATACTTTGCAAATT
JMFF038P22+           CCANTGCTCAGTGCTCAACCNTAGAAGCATCAGGCACATGAGGTCCATACTTTGCAAATT
                      ____________________________________________________________
consensus             CCATTGCTCAGTGCTCAACCTTAGAAGCATCAGGCACATGAGGTCCATACTTTGCAAATT
 
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rJMFF007N10-          TATATGAGCATTCTGAGNAANCCGACCCGANAGCTGCTCCAGCACTANNAGCTACTACTG
JMFF007N10+           TATATGAGCATTCTGAGTAAGCCGACCCGAGAGCTGCTCCAGCACTAAAAGCTACTACTG
JMFF038P22+           TATATGAGCATTCTGAGTAAGCCGACCCGAGAGCTGCTCCAGCACTAAAAGNTACTACTG
                      ____________________________________________________________
consensus             TATATGAGCATTCTGAGTAAGCCGACCCGAGAGCTGCTCCAGCACTAAAAGCTACTACTG
 
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rJMFF007N10-          ACCGGCGTGNTACNGGACTCCTGAGGCNNATGAGGCCACCNNGGACACCGATGAG     
JMFF007N10+           ACCGGCGTGTTACGGGACTCCTGAGGCAGATGAGGCCACCAAGGACACCGATGAGGGAGA
JMFF038P22+           ACCGGCGTGTTACGGGACTCCNGAGGCAGATGAGGCCACCAAGGACACCGATGAGGGAGA
                      ____________________________________________________________
consensus             ACCGGCGTGTTACGGGACTCCTGAGGCAGATGAGGCCACCAAGGACACCGATGAGGGAGA
 
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JMFF007N10+           AGTAGACGCCCCGGCGAAGGGCCAAATTGAGGCAAGCGTCCCACTTGGCATCAAAATCGT
JMFF038P22+           AGTAGACGCCCCGGCGAAGGGCCAAATTGAGGCAAGCGTCCCACTTGGCATCAAAATCGT
                      ____________________________________________________________
consensus             AGTAGACGCCCCGGCGAAGGGCCAAATTGAGGCAAGCGTCCCACTTGGCATCAAAATCGT
 
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JMFF007N10+           ACGCCGGCGGTGATATGAATTCCTGCTTCTTGTTCTCCTCCGCCATTGCCACGTTAAAAT
JMFF038P22+           ACGCCGGCGGTGATATGAATTCCTGCTTCTTGTTCTCCTCCGCCANTGCCACGTTAAAAT
                      ____________________________________________________________
consensus             ACGCCGGCGGTGATATGAATTCCTGCTTCTTGTTCTCCTCCGCCATTGCCACGTTAAAAT
 
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JMFF007N10+           GCTCTCTC--CTCTCTCTCTCTCTCTCTCTCTCTACTTCAGAGAAGAAAAGAATAATTT 
JMFF038P22+           GCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTACTTCAGAGAAGAAAAGAATAATTTT
                      ____________________________________________________________
consensus             GCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTACTTCAGAGAAGAAAAGAATAATTTT