| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001H06 | Sequence | 540 | 008834 (4) | ref|XP_009630249.1| | 178 | PREDICTED: uncharacterized protein LOC104120218 [Nicotiana tomentosiformis] | 768 | 009746 (3) | emb|CDP12566.1| | 8e-46 | unnamed protein product [Coffea canephora] |
| JMFF036K21 | Sequence | 575 | 008834 (4) | ref|XP_009630249.1| | 149 | PREDICTED: uncharacterized protein LOC104120218 [Nicotiana tomentosiformis] | 771 | 009746 (3) | emb|CDP12566.1| | 5e-51 | unnamed protein product [Coffea canephora] |
| JMSF010B23 | Sequence | 301 | 008834 (4) | 670 | 013903 (4) | ref|NP_001239805.1| | 2e-31 | uncharacterized protein LOC100814113 [Glycine max] gb|ACU17338.1| unknown [Glyci | |||
| JMSF034C20 | Sequence | 724 | 008834 (4) | ref|XP_009630249.1| | 241 | PREDICTED: uncharacterized protein LOC104120218 [Nicotiana tomentosiformis] | 707 | 009746 (3) | emb|CDP12566.1| | 4e-43 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF034C20+ GAGAAGATGATTGCATGTTGGGCGCA
____________________________________________________________
consensus GAGAAGATGATTGCATGTTGGGCGCA
. : . : . : . : . : . :
JMSF034C20+ CATAGGTCTGGGAAACAGGCTTCGAGCTGGCCAGTCATGCTACTCACAATCACAGATGGG
____________________________________________________________
consensus CATAGGTCTGGGAAACAGGCTTCGAGCTGGCCAGTCATGCTACTCACAATCACAGATGGG
. : . : . : . : . : . :
JMFF001H06+ CAGGTAGCTTCAAAGTCT
JMSF034C20+ AACTCGATTATTTCTTGGGGGTGAGGGTTCTTTTCCTTGTCACAGGTAGCTTCAAAGTCT
____________________________________________________________
consensus AACTCGATTATTTCTTGGGGGTGAGGGTTCTTTTCCTTGTCACAGGTAGCTTCAAAGTCT
. : . : . : . : . : . :
JMFF001H06+ ATGACAACAAAATATTGAAAATCTTGGAATTGGAATTCGTAAGGGTAACGCTGAGGGATT
JMSF034C20+ ATGACAACAAAATATTGAAAATCTTGGAATTGGAATTCGTAAGGGTAACGCTGAGGGATT
JMFF036K21+ GGAATTGGAATTCGTAAGGGTAACGCTGAGGGATT
____________________________________________________________
consensus ATGACAACAAAATATTGAAAATCTTGGAATTGGAATTCGTAAGGGTAACGCTGAGGGATT
. : . : . : . : . : . :
JMFF001H06+ GTATTGAATGGGCCATAATGGAACCGGCTGTCCACTGAGTAAGGATAAAACTGGGCTTCA
JMSF034C20+ GTATTGAATGGGCCATAATGGAACCGGCTGTCCACTGAGTAAGGATAAAACTGGGCTTCA
JMFF036K21+ GTATTGAATGGGCCATAATGGAACCGGCTGTCCACTGAGTAAGGATAAAACTGGGCTTCA
____________________________________________________________
consensus GTATTGAATGGGCCATAATGGAACCGGCTGTCCACTGAGTAAGGATAAAACTGGGCTTCA
. : . : . : . : . : . :
JMFF001H06+ AAAGCACTCACTGCGCACATTCGCATATTATTTGAGCCGGGGTAGAAGGCGGACCAAGAG
JMSF034C20+ AAAGCACTCACTGCGCACATTCGCATATTATTTGAGCCGGGGTAGAAGGCGGACCAAGAG
JMFF036K21+ AAAGCACTCACTGCGCACATTCGCATATTATTTGAGCCGGGGTAGAAGGCGGACCAAGAG
____________________________________________________________
consensus AAAGCACTCACTGCGCACATTCGCATATTATTTGAGCCGGGGTAGAAGGCGGACCAAGAG
. : . : . : . : . : . :
JMFF001H06+ CCAGAAGCATGCTGTTGAACGGGTTTTTTTGGAGATTCTTTAGATGAGTCAATTGGTTGG
JMSF034C20+ CCAGAAGCATGCTGTTGAACGGGTTTTTTTGGAGATTCTTTAGATGAGTCAATTGGTTGG
JMFF036K21+ CCAGAAGCATGCTGTTGAACGGGTTTTTTTGGAGATTCTTTAGATGAGTCAATTGGTTGG
____________________________________________________________
consensus CCAGAAGCATGCTGTTGAACGGGTTTTTTTGGAGATTCTTTAGATGAGTCAATTGGTTGG
. : . : . : . : . : . :
JMFF001H06+ TCACTGCTAAATGAGCAATCAATATTATCCCCAACTGGTTGAGAGTAGGTGCCTTCATTA
JMSF034C20+ TCACTGCTAAATGAGCAATCAATATTATCCCCAACTGGTTGAGAGTAGGTGCCTTCATTA
JMFF036K21+ TCACTGCTAAATGAGCAATCAATATTATCCCCAACTGGTTGAGAGTAGGTGCCTTCATTA
____________________________________________________________
consensus TCACTGCTAAATGAGCAATCAATATTATCCCCAACTGGTTGAGAGTAGGTGCCTTCATTA
. : . : . : . : . : . :
JMFF001H06+ AACTCGGGAAAGTTTTTTATGGCCGCCCCGTTGTAATGCATATGTTGAGGATATCCCGTG
JMSF034C20+ AACTCGGGAAAGTTTTTTATGGCCGCCCCGTTGTAATGCATATGTTGAGGATATCCCGTG
JMFF036K21+ AACTCGGGAAAGTTTTTTATGGCCGCCCCGTTGTAATGCATATGTTGAGGATATCCCGTG
____________________________________________________________
consensus AACTCGGGAAAGTTTTTTATGGCCGCCCCGTTGTAATGCATATGTTGAGGATATCCCGTG
. : . : . : . : . : . :
JMFF001H06+ TTCTGGAGGCATCTTATCGGTGCCTCACAGTTCACCTGCATAGTATCTTTATGTTCTAAT
JMSF034C20+ TTCTGGAGGCATCTTATCGGTGCCTCACAGTTCACCTGCATAGTATCTTTATGTTCTAAT
JMFF036K21+ TTCTGGAGGCATCTTATCGGTGCCTCACAGTTCACCTGCATAGTATCTTTATGTTCTAAT
____________________________________________________________
consensus TTCTGGAGGCATCTTATCGGTGCCTCACAGTTCACCTGCATAGTATCTTTATGTTCTAAT
. : . : . : . : . : . :
JMFF001H06+ GCGATCATGGTGTTGTATGTAGTTAAGATCCGCGAGCAAGTACATCAAATATCCCTCTTC
JMSF034C20+ GCGATCATGGTGTTGTATGTAGTTAAGATCCGCGAGCAAGTACATCAAATATCCCTCTTC
JMSF010B23+ ATGGTGTTGTATGTAGTTAAGATCCGCGAGCAAGTCCATCAAATCTCCCTCTTT
JMFF036K21+ GCGATCATGGTGTTGTATGTAGTTAAGATCCGCGAGCAAGTACATCAAATATCCCTCTTC
____________________________________________________________
consensus GCGATCATGGTGTTGTATGTAGTTAAGATCCGCGAGCAAGTACATCAAATATCCCTCTTC
. : . : . : . : . : . :
JMFF001H06+ CAATTCGCACACCT
JMSF034C20+ CAATTCGCACACCT
JMSF010B23+ CAATTCGCACACCT
JMFF036K21+ CAATTCGCACACCTACAAACCCCACCCACCGATCAACTTTTTGTTCCCCGGCGATGTGAT
____________________________________________________________
consensus CAATTCGCACACCTACAAACCCCACCCACCGATCAACTTTTTGTTCCCCGGCGATGTGAT
. : . : . : . : . : . :
JMFF036K21+ TTGGACACCGAGCAGAGGGAAGAGTAGGTTATGGTGAGATAGAAAGATTTAGGCATTTAG
____________________________________________________________
consensus TTGGACACCGAGCAGAGGGAAGAGTAGGTTATGGTGAGATAGAAAGATTTAGGCATTTAG