Contig 008830:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF036B04-                                                          TGTTTATTACAT
rJMFF039N06-                                                          TGTTTATTACAT
                      ____________________________________________________________
consensus                                                             TGTTTATTACAT
 
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rJMFF036B04-          TTAAACTAGATATTCGGAATGCATAGTTCAAAGCTCCGAATTATGATATGCATGCACGAC
rJMFF039N06-          TTAAACTAGATATTCGGAATGCATAGTTCAAAGCTCCGAATTATGATATGCATGCACGAC
                      ____________________________________________________________
consensus             TTAAACTAGATATTCGGAATGCATAGTTCAAAGCTCCGAATTATGATATGCATGCACGAC
 
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rJMFF036B04-          TTCTATATATATCATTCAGATTTCACAGCTTGCACGCTGCTCTACGAGGACACCGAACCG
rJMFF039N06-          TTCTATATATATCATTCAGATTTCACAGCTTGCACGCTGCTCTACGAGGACACCGAACCG
                      ____________________________________________________________
consensus             TTCTATATATATCATTCAGATTTCACAGCTTGCACGCTGCTCTACGAGGACACCGAACCG
 
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rJMFF036B04-          CTGCCGAAGTTTTCCGGGCAGAAAGTAAACCAATACTTGTCGGAGGAGCAGCTAACGATC
rJMFF039N06-          CTGCCGAAGTTTTCCGGGCAGAAAGTAAACCAATACTTGTCGGAGGAGCAGCTAACGATC
                      ____________________________________________________________
consensus             CTGCCGAAGTTTTCCGGGCAGAAAGTAAACCAATACTTGTCGGAGGAGCAGCTAACGATC
 
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rJMFF036B04-          GGAGACGGCCGATCAAATGCATAGCTAACGTACGAAGGACATGCATTCTTAAACATCTTG
rJMFF039N06-          GGAGACGGCCGATCAAATGCATAGCTAACGTACGAAGGACATGCATTCTTAAACATCTTG
                      ____________________________________________________________
consensus             GGAGACGGCCGATCAAATGCATAGCTAACGTACGAAGGACATGCATTCTTAAACATCTTG
 
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rJMFF036B04-          GAATACAAACTAGGCTTGCATTTGTCGGGACTTCCGTACTGATTCCGGCAGCAAAAGGAG
rJMFF039N06-          GAATACAAACTAGGCTTGCATTTGTCGGGACTTCCGTACTGATTCCGGCAGCAAAAGGAG
                      ____________________________________________________________
consensus             GAATACAAACTAGGCTTGCATTTGTCGGGACTTCCGTACTGATTCCGGCAGCAAAAGGAG
 
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rJMFF036B04-          TCGGCGTTGAAAGCCAAGCAGGCGCTTTTACACGCCACAACATCTCCGTTACCGTTCACA
rJMFF039N06-          TCGGCGTTGAAAGCCAAGCAGGCGCTTTTACACGCCACAACATCTCCGTTACCGTTCACA
JMFF039N06+                                                           TTACCGTTCACA
JMFF036B04+                                                           TTACCGTTCACA
                      ____________________________________________________________
consensus             TCGGCGTTGAAAGCCAAGCAGGCGCTTTTACACGCCACAACATCTCCGTTACCGTTCACA
 
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rJMFF036B04-          ACTTGCAGCTCCGCCGGACAAGCATTCCTCATGCTTTTCATACACCCGCCGATGTAGCAT
rJMFF039N06-          ACTTGCAGCTCCGCCGGACAAGCATTCCTCATGCTTTTCATACACCCGCCGATGTAGCAT
JMFF039N06+           ACTTGCAGCTCCGCCGGACAAGCATTCCTCATGCTTTTCATACACCCGCCGATGTAGCAT
JMFF036B04+           ACTTGCAGCTCCGCCGGACAAGCATTCCTCATGCTTTTCATACACCCGCCGATGTAGCAT
                      ____________________________________________________________
consensus             ACTTGCAGCTCCGCCGGACAAGCATTCCTCATGCTTTTCATACACCCGCCGATGTAGCAT
 
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rJMFF036B04-          TTCGAGGACGAAGGGATCGACGCAACCGAGACGGGGAGGTTGTATCCGTCCACCAAGCTC
rJMFF039N06-          TTCGAGGACGAAGGGATCGACGCAACCGAGACGGGGAGGTTGTATCCGTCCACCAAGCTC
JMFF039N06+           TTCGAGGACGAAGGGATCGACGCAACCGAGACGGGGAGGTTGTATCCGTCCACCAAGCTC
JMFF036B04+           TTCGAGGACGAAGGGATCGACGCAACCGAGACGGGGAGGTTGTATCCGTCCACCAAGCTC
                      ____________________________________________________________
consensus             TTCGAGGACGAAGGGATCGACGCAACCGAGACGGGGAGGTTGTATCCGTCCACCAAGCTC
 
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rJMFF036B04-          ACGTCGTAGAAATCGGGTTTGCCTTTATCGGCTTGTAAAGTTAATTCCACCAGTGTCGCC
rJMFF039N06-          ACGTCGTAGAAATCGGGTTTGCCTTTATCGGCTTGTAAAGTTAATTCCACCAGTGTCGCC
JMFF039N06+           ACGTCGTAGAAATCGGGTTTGCCTTTATCGGCTTGTAAAGTTAATTCCACCAGTGTCGCC
JMFF036B04+           ACGTCGTAGAAATCGGGTTTGCCTTTATCGGCTTGTAAAGTTAATTCCACCAGTGTCGCC
                      ____________________________________________________________
consensus             ACGTCGTAGAAATCGGGTTTGCCTTTATCGGCTTGTAAAGTTAATTCCACCAGTGTCGCC
 
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rJMFF036B04-          GGAGGAAGGCCGATGCTGCCGTCGCACTCCAGTTTCCCGTCGCAGTCGCCGGTTTCGCAT
rJMFF039N06-          GGAGGAAGGCCGATGCTGCCGTCGCACTCCAGTTTCCCGTCGCAGTCGCCGGTTTCGCAT
JMFF039N06+           GGAGGAAGGCCGATGCTGCCGTCGCACTCCAGTTTCCCGTCGCAGTCGCCGGTTTCGCAT
JMFF036B04+           GGAGGAAGGCCGATGCTGCCGTCGCACTCCAGTTTCCCGTCGCAGTCGCCGGTTTCGCAT
                      ____________________________________________________________
consensus             GGAGGAAGGCCGATGCTGCCGTCGCACTCCAGTTTCCCGTCGCAGTCGCCGGTTTCGCAT
 
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rJMFF036B04-          GCGGGTTTGTGGTTGCCGGAGTCGAAGTCGCAGCCGGTTCTTGCCCATACGCGGCCGCTC
rJMFF039N06-          GCGGGTTTGTGGTTGCCGGAGTCGAAGTCGCAGCCGGTTCTTGCCCATACGCGGCCGCTC
JMFF039N06+           GCGGGTTTGTGGTTGCCGGAGTCGAAGTCGCAGCCGGTTCTTGCCCATACGCGGCCGCTC
JMFF036B04+           GCGGGTTTGTGGTTGCCGGAGTCGAAGTCGCAGCCGGTTCTTGCCCATACGCGGCCGCTC
                      ____________________________________________________________
consensus             GCGGGTTTGTGGTTGCCGGAGTCGAAGTCGCAGCCGGTTCTTGCCCATACGCGGCCGCTC
 
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rJMFF036B04-          CAATCCCCGGGCACCCGGAAGC                                      
rJMFF039N06-          CAATCCCCGGGCACCCGGAAGCTATGGGTTTTCCCCGGCGGGA                 
JMFF039N06+           CAATCCCCGGGCACCCGGAAGCTATGGGTTTTCCCCGGCGGGAGATAGAAGCCGCCGTTT
JMFF036B04+           CAATCCCCGGGCACCCGGAAGCTATGGGTTTTCCCCGGCGGGAGATAGAAGCCGCCGTTT
                      ____________________________________________________________
consensus             CAATCCCCGGGCACCCGGAAGCTATGGGTTTTCCCCGGCGGGAGATAGAAGCCGCCGTTT
 
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JMFF039N06+           GCCACCACGGGGTAGCCGCTGTTTGGGGCGGTCGCCGGCCATATCGGAAACGAGCATTTG
JMFF036B04+           GCCACCACGGGGTAGCCGCTGTTTGGGGCGGTCGCCGGCCATATCGGAAACGAGCATTTG
                      ____________________________________________________________
consensus             GCCACCACGGGGTAGCCGCTGTTTGGGGCGGTCGCCGGCCATATCGGAAACGAGCATTTG
 
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JMFF039N06+           TTAGTAACGTAGAAGGTACAGGACTCTACATGTACGTATACTATAAAGTGAAGTGCAGCG
JMFF036B04+           TTAGTAACGTAGAAGGTACAGGACTCTACATGTACGTATACTATAAAGTGAAGTGCAGCG
                      ____________________________________________________________
consensus             TTAGTAACGTAGAAGGTACAGGACTCTACATGTACGTATACTATAAAGTGAAGTGCAGCG
 
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JMFF039N06+           GAGAGGACGAAAACTAGAGACGTGTTTGGCAACTTCATATTGCTTGTAGTAATTCAGAT 
JMFF036B04+           GAGAGGACGAAAACTAGAGACGTGTTTGGCAACTTCATATTGCTTGTAGTAATTCAGATG
                      ____________________________________________________________
consensus             GAGAGGACGAAAACTAGAGACGTGTTTGGCAACTTCATATTGCTTGTAGTAATTCAGATG