Contig 008827:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010C16Sequence468008827 (4)821003964 (3)ref|XP_009782883.1|6e-83PREDICTED: probable protein phosphatase 2C 65 [Nicotiana sylvestris]
JMFF024H23Sequence484008827 (4)762003964 (3)ref|XP_009782883.1|1e-82PREDICTED: probable protein phosphatase 2C 65 [Nicotiana sylvestris]
JMFF035B24Sequence488008827 (4)684003964 (3)ref|XP_009782883.1|5e-83PREDICTED: probable protein phosphatase 2C 65 [Nicotiana sylvestris]
JMFF038F23Sequence468008827 (4)

Alignment

This contig is upended


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JMFF038F23+               TCCTTGTTTTCTGCATTTTTAACTCGATATACTTCGCGCTTCTTCACCCTCTGGCA
JMFF010C16+               TCCTTGTTTTCTGCATTTTTAACTCGATATACTTCGCGCTTCTTCACCCTCTGGCA
JMFF024H23+                                                                 CTGGCA
JMFF035B24+                                                                 CTGGCA
                      ____________________________________________________________
consensus                 TCCTTGTTTTCTGCATTTTTAACTCGATATACTTCGCGCTTCTTCACCCTCTGGCA
 
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JMFF038F23+           GGTACAGCAAGCACCCATTCTTATTCTCATACAGCCCTTCAAGAAACTCAACTTCTGGAG
JMFF010C16+           GGTACAGCAAGCACCCATTCTTATTCTCATACAGCCCTTCAAGAAACTCAACTTCTGGAG
JMFF024H23+           GGTACAGCAAGCACCCATTCTTATTCTCATACAGCCCTTCAAGAAACTCAACTTCTGGAG
JMFF035B24+           GGTACAGCAAGCACCCATTCTTATTCTCATACAGCCCTTCAAGAAACTCAACTTCTGGAG
                      ____________________________________________________________
consensus             GGTACAGCAAGCACCCATTCTTATTCTCATACAGCCCTTCAAGAAACTCAACTTCTGGAG
 
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JMFF038F23+           ATCGATCAATCAATCAATCAATCAATGTCATTCTATTTTGATCGACCCACCCAATGACCA
JMFF010C16+           ATCGATCAATCAATCAATCAATCAATGTCATTCTATTTTGATCGACCCACCCAATGACCA
JMFF024H23+           ATCGATCAATCAATCAATCAATCAATGTCATTCTATTTTGATCGACCCACCCAATGACCA
JMFF035B24+           ATCGATCAATCAATCAATCAATCAATGTCATTCTATTTTGATCGACCCACCCAATGACCA
                      ____________________________________________________________
consensus             ATCGATCAATCAATCAATCAATCAATGTCATTCTATTTTGATCGACCCACCCAATGACCA
 
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JMFF038F23+           AGATTGCAACTTTCTCCAAGAAAATGATCAAATCTTGGGGAGGATCGAGCCGATTTGCCC
JMFF010C16+           AGATTGCAACTTTCTCCAAGAAAATGATCAAATCTTGGGGAGGATCGAGCCGATTTGCCC
JMFF024H23+           AGATTGCAACTTTCTCCAAGAAAATGATCAAATCTTGGGGAGGATCGAGCCGATTTGCCC
JMFF035B24+           AGATTGCAACTTTCTCCAAGAAAATGATCAAATCTTGGGGAGGATCGAGCCGATTTGCCC
                      ____________________________________________________________
consensus             AGATTGCAACTTTCTCCAAGAAAATGATCAAATCTTGGGGAGGATCGAGCCGATTTGCCC
 
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JMFF038F23+           TGATTCAGAATTGTTGGATTTACAACGAAAGGGACGAATGATTTGGTTTCTAGTACAGAA
JMFF010C16+           TGATTCAGAATTGTTGGATTTACAACGAAAGGGACGAATGATTTGGTTTCTAGTACAGAA
JMFF024H23+           TGATTCAGAATTGTTGGATTTACAACGAAAGGGACGAATGATTTGGTTTCTAGTACAGAA
JMFF035B24+           TGATTCAGAATTGTTGGATTTACAACGAAAGGGACGAATGATTTGGTTTCTAGTGCAGAA
                      ____________________________________________________________
consensus             TGATTCAGAATTGTTGGATTTACAACGAAAGGGACGAATGATTTGGTTTCTAGTACAGAA
 
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JMFF038F23+           AGTCACAAATCATGAATGTTGTTGTCTCATGAAATGAGCAAAACATTCATGATTTGTGGG
JMFF010C16+           AGTCACAAATCATGAATGTTGTTGTCTCATGAAATGAGCAAAACATTCATGATTTGTGGG
JMFF024H23+           AGTCACAAATCATGAATGTTGTTGTCTCATGAAATGAGCAAAACATTCATGATTTGTGGG
JMFF035B24+           AGTCACAAATCATGAATGTTGTTGTCTCATGAAATGAGCAAAACATTCATGATTTGTGGG
                      ____________________________________________________________
consensus             AGTCACAAATCATGAATGTTGTTGTCTCATGAAATGAGCAAAACATTCATGATTTGTGGG
 
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JMFF038F23+           GAAAATGAGATCAACTATGTTATTAGGAGAAAAATTATATGTATTTTTGCCAGATTAATC
JMFF010C16+           GAAAATGAGATCAACTATGTTATTAGGAGAAAAATTATATGTATTTTTGCCAGATTAATC
JMFF024H23+           GAAAATGAGATCAACTATGTTATTAGGAGAAAAATTATATGTATTTTTGCCAGATTAATC
JMFF035B24+           GAAAATGAGATCAACTATGTTATTAGGAGAAAAATTATATGTATTTTTGCCAGATTAATC
                      ____________________________________________________________
consensus             GAAAATGAGATCAACTATGTTATTAGGAGAAAAATTATATGTATTTTTGCCAGATTAATC
 
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JMFF038F23+           GCCCAATATCAAACTGAGAAGAGGGGCTTTGTTTGATGGGGAAGATGAAGAT        
JMFF010C16+           GCCCAATATCAAACTGAGAAGAGGGGCTTTGTTTGATGGGGAAGATGAAGAT        
JMFF024H23+           GCCCAATATCAAACTGAGAAGAGGGGCTTTGTTTGATGGGGAAGATGAAGATGGCACCTC
JMFF035B24+           GCCCAATATCAAACTGAGAAGAGGGGCTTTGTTTGATGGGGAAGATGAAGATGGCACCTC
                      ____________________________________________________________
consensus             GCCCAATATCAAACTGAGAAGAGGGGCTTTGTTTGATGGGGAAGATGAAGATGGCACCTC
 
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JMFF024H23+           ACCCATCAATTTCACCTCTCTTATGTTTCTACACAACCCCTGCCCCTCTTCTCTCCCC  
JMFF035B24+           ACCCATCAATTTCACCTCTCTTATGTTTCTACACAACCCCTGCCCCTCTTCTCTCCCCTC
                      ____________________________________________________________
consensus             ACCCATCAATTTCACCTCTCTTATGTTTCTACACAACCCCTGCCCCTCTTCTCTCCCCTC