Contig 008825:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005B16Sequence490008825 (22)ref|XP_006342258.1|280PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]781008825 (22)ref|XP_009787586.1|410PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMFF006I21Sequence548008825 (22)ref|XP_006342258.1|306PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]822008825 (22)ref|XP_009787586.1|396PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMFF010B02Sequence537008825 (22)ref|XP_006342258.1|286PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]806013669 (4)ref|XP_006342258.1|409PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]
JMFF014P13Sequence545008825 (22)ref|XP_006342258.1|293PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]723013669 (4)ref|XP_009787586.1|211PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMFF016I24Sequence526008825 (22)ref|XP_006342258.1|284PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]794013669 (4)ref|XP_011100307.1|366PREDICTED: carboxymethylenebutenolidase homolog [Sesamum indicum]
JMFF024L14Sequence527008825 (22)ref|XP_006342258.1|284PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]800013669 (4)ref|XP_009787586.1|403PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMFF028O07Sequence584008825 (22)ref|XP_006342258.1|331PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]541008825 (22)ref|XP_009787586.1|225PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMFF034E24Sequence477008825 (22)ref|XP_006342258.1|273PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]691008825 (22)ref|XP_009787586.1|310PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMFF034M01Sequence496008825 (22)ref|XP_006342258.1|282PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]718008825 (22)ref|XP_009787586.1|330PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMFF039E03Sequence588008825 (22)ref|XP_006342258.1|336PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]691008825 (22)ref|XP_009787586.1|317PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMFF049O02Sequence628008825 (22)ref|XP_006342258.1|350PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]605008825 (22)ref|XP_009787586.1|239PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMFN040N14Sequence640008825 (22)ref|XP_006342258.1|363PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]
JMFS102C12Sequence611008825 (22)ref|XP_006342258.1|352PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]
JMSF050B17Sequence587008825 (22)ref|XP_006342258.1|333PREDICTED: carboxymethylenebutenolidase homolog [Solanum tuberosum]753008825 (22)ref|XP_009787586.1|379PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF050B17- ACAGAATACT
rJMFF039E03- ATGTGCAAACTCAGGTCGACTGGAAAACAGAATACT
rJMFF034M01- TAAATGTGCAAACTCAGGTCGACTGGAAAACAGAATACT
rJMFF028O07- AATACT
rJMFF034E24- TAAATGTGCAAACTCAGGTCGACTGGAAAACAGAATACT
rJMFF006I21- ATGCTTCTAAATGTGCAAACTCAGGTCGACTGGAAAACAGAATACT
                      ____________________________________________________________
consensus ATGCTTCTAAATGTGCAAACTCAGGTCGACTGGAAAACAGAATACT
 
. : . : . : . : . : . :
rJMSF050B17- ATTTATAGGTCCATTTGCCAATAAACACAAGAAAGTGCAGAACTTTATTGTAATATACAA
rJMFF039E03- ATTTATAGGTCCATTTGCCAATAAACACAAGAAAGTGCAGAACTTTATTGTAATATACAA
rJMFF034M01- ATTTATAGGTCCATTTGCCAATAAACACAAGAAAGTGCAGAACTTTATTGTAATATACAA
rJMFF028O07- ATTTATAGGTCCATTTGCCANTAAACNCAAGAAAGTGCAGAACTTTATTGTAATATACAA
rJMFF034E24- ATTTATAGGTCCATTTGCCAATAAACACAAGAAAGTGCAGAACTTTATTGTAATATACAA
rJMFF049O02- AAAGGGCAGAACTTTATTGTAATATACAA
rJMFF006I21- ATTTATAGGTCCATTTGCCAATAAACACAAGAAAGTGCAGAACTTTATTGTAATATACAA
rJMFF005B16- TTTGCCAATAAACACAAGAAAGTGCAGAACTTTATTGTAATATACAA
                      ____________________________________________________________
consensus ATTTATAGGTCCATTTGCCAATAAACACAAGAAAGTGCAGAACTTTATTGTAATATACAA
 
. : . : . : . : . : . :
rJMSF050B17- TGCCAGACCGCGAACGAACAAACATACCTTATTGGTAGTAGGATCACCAACTAGCTTTTG
rJMFF039E03- TGCCAGACCGCGAACGAACAAACATACCTTATTGGTAGTAGGATCACCAACTAGCTTTTG
rJMFF034M01- TGCCAGACCGCGAACGAACAAACATACCTTATTGGTAGTAGGATCACCAACTAGCTTTTG
rJMFF028O07- TGCCAGACCGCGAACGAACAAACATACCTTATTGGTAGTAGGATCACCAACTAGCTTTTG
rJMFF034E24- TGCCAGACCGCGAACGAACAAACATACCTTATTGGTAGTAGGATCACCAACTAGCTTTTG
rJMFF049O02- TGCCAGACCGCGAACGAACAAACATACCTTATTGGTAGTAGGATCACCAACTAGCTTTTG
rJMFF006I21- TGCCAGACCGCGAACGAACAAACATACCTTATTGGTAGTAGGATCACCAACTAGCTTTTG
rJMFF005B16- TGCCAGACCGCGAACGAACAAACATACCTTATTGGTAGTAGGATCACCAACTAGCTTTTG
                      ____________________________________________________________
consensus TGCCAGACCGCGAACGAACAAACATACCTTATTGGTAGTAGGATCACCAACTAGCTTTTG
 
. : . : . : . : . : . :
rJMSF050B17- TTTAGGCAGACAAGAAGCGGCTCATCCATGACCGGAAACGTGACCATGCCAGCTCTACCG
rJMFF039E03- TTTAGGCAGACAAGAAGCGGCTCATCCATGACCGGAAACGTGACCATGCCAGCTCTACCG
rJMFF034M01- TTTAGGCAGACAAGAAGCGGCTCATCCATGACCGGAAACGTGACCATGCCAGCTCTACCG
rJMFF028O07- TTTANGCANACAAGAAGCGGCTCATCCATGACCGGAAACGTGACCATGCCAGCTCTACCG
rJMFF034E24- TTTAGGCAGACAAGAAGCGGCTCATCCATGACCGGAAACGTGACCATGCCAGCTCTACCG
rJMFF049O02- TTTAGGCAGACAAGAAGCGGCCCATCCATGACCGGAAACGTGACCATGCCAGCTCTACCG
rJMFF006I21- TTTAGGCAGACAAGAAGCGGCCCATCCATGACCGGAAACGTGACCATGCCAGCTCTACCG
rJMFF005B16- TTTAGGCAGACAAGAAGCGGCTCATCCATGACCGGAAACGTGACCATGCCAGCTCTACCG
                      ____________________________________________________________
consensus TTTAGGCAGACAAGAAGCGGCTCATCCATGACCGGAAACGTGACCATGCCAGCTCTACCG
 
. : . : . : . : . : . :
rJMSF050B17- TAGCATTTTCAACATCGGACTCTCCCATGGTTCTCCTCCTCTGCACACCATCAGGGGAGG
rJMFF039E03- TAGCATTTTCAACATCGGACTCTCCCATGGTTCTCCTCCTCTGCACACCATCAGGGGAGG
rJMFF034M01- TAGCATTTTCAACATCGGACTCTCCCATGGTTCTCCTCCTCTGCACACCATCAGGGGAGG
rJMFF028O07- TANCATTTTCAACATCGGACTCTCCCATGGTTCTCCTCCTCTGCACACCATCAGGGGAGG
rJMFF034E24- TAGCATTTTCAACATCGGACTCTCCCATGGTTCTCCTCCTCTGCACACCATCAGGGGAGG
rJMFF049O02- TAGCATTTTCAACATCGGACTCTCCCATGGTTCTCCTCCTCTGCACACCATCAGGGGAGG
rJMFF006I21- TAGCATTTTCAACATCGGACTCTCCCATGGTTCTCCTCCTCTGCACACCATCAGGGGAGG
rJMFF005B16- TAGCATTTTCAACATCGGACTCTCCCATGGTTCTCCTCCTCTGCACACCATCAGGGGAGG
                      ____________________________________________________________
consensus TAGCATTTTCAACATCGGACTCTCCCATGGTTCTCCTCCTCTGCACACCATCAGGGGAGG
 
. : . : . : . : . : . :
rJMSF050B17- TGTTCATAAACGCGTGCCCAGCCTTTGGATAGAAGTACACTTCATGTGGAATTCCAGATG
rJMFF039E03- TGTTCATAAACGCGTGCCCAGCCTTTGGATAGAAGTACACTTCATGTGGAATTCCAGATG
rJMFF034M01- TGTTCATAAACGCGTGCCCAGCCTTTGGATAGAAGTACACTTCATGTGGAATTCCAGATG
rJMFF028O07- TGTTCATAAACGCGTGCCCANCCTTTGGATANAAGTACACTTCATGTGGAATTCCAGATG
rJMFF034E24- TGTTCATAAACGCGTGCCCAGCCTTTGGATAGAAGTACACTTCATGTGGAATTCCAGATG
rJMFF049O02- TGTTCATAAACGCGTGCCCAGCCTTTGGATAGAAGTACACTTCATGTGGAATTCCAGATG
rJMFF006I21- TGTTCATAAACGCGTGCCCAGCCTTTGGATAGAAGTACACTTCATGTGGAATTCCAGATG
rJMFF005B16- TGTTCATAAACGCGTGCCCAGCCTTTGGATAGAAGTACACTTCATGTGGAATTCCAGATG
JMFN040N14+ TTCCAGATG
                      ____________________________________________________________
consensus TGTTCATAAACGCGTGCCCAGCCTTTGGATAGAAGTACACTTCATGTGGAATTCCAGATG
 
. : . : . : . : . : . :
rJMSF050B17- CCTTCAGCTTCTCCTCCAAAGCTTGCCCAGACTTTATATCTGAAAATCCAACAATACCAT
rJMFF039E03- CCTTCAGCTTCTCCTCCAAAGCTTGCCCAGACTTTATATCTGAAAATCCAACAATACCAT
rJMFF034M01- CCTTCAGCTTCTCCTCCAAAGCTTGCCCAGACTTTATATCTGAAAATCCAACAATACCAT
rJMFF028O07- CCTTCANCTTCTCCTCCAAAGCTTGCCCAGACTTTATATCTGAAAATCCAACAATACCAT
rJMFF034E24- CCTTCAGCTTCTCCTCCAAAGCTTGCCCAGACTTTATATCTGAAAATCCAACAATACCAT
rJMFF049O02- CCTTCAGCTTCTCCTCCAAAGCTTGCCCAGACTTTATATCTGAAAATCCAACAATACCAT
rJMFF006I21- CCTTCAGCTTCTCCTCCAAAGCTTGCCCAGACTTTATATCTGAAAATCCAACAATACCAT
rJMFF005B16- CCTTCAGCTTCTCCTCCAAAGCTTGCCCAGACTTTATATCTGAAAATCCAACAATACCAT
JMFN040N14+ CCTTCAGCTTCTCCTCCAAAGCTTGCCCAGACTTTATATCTGAAAATCCAACAATACCAT
JMFS102C12+ GCCCAGACTTTATATCTGAAAATCCAACAATACCAT
JMFF049O02+ CAGACTTTATATCTGAAAATCCAACAATACCAT
                      ____________________________________________________________
consensus CCTTCAGCTTCTCCTCCAAAGCTTGCCCAGACTTTATATCTGAAAATCCAACAATACCAT
 
. : . : . : . : . : . :
rJMSF050B17- CCTCCTCACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
rJMFF039E03- CCTCCTCACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
rJMFF034M01- CCTCCTCACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
rJMFF028O07- CCTCCTCACCAAAATGAGCCTGCACAGGTGCCTTANCCTTGGCAGGGTCTGCAAGCTCNG
rJMFF034E24- CCTCCTCACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
rJMFF049O02- CCTCCTCACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
rJMFF006I21- CCTCCTCACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
rJMFF005B16- CCTCCTCACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
JMFN040N14+ CCTCCTCACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
JMFS102C12+ CCTCCTCACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
JMSF050B17+ TCCTCACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
JMFF028O07+ AAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
JMFF039E03+ ACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
JMFF049O02+ CCTCCTCACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
JMFF010B02+ GGGTCTGCAAGCTCAG
JMFF024L14+ GCTCAG
JMFF016I24+ CTCAG
JMFF006I21+ TCTGCAAGCTCAG
JMFF014P13+ CCTTGGCAGGGTCTGCAAGCTCAG
                      ____________________________________________________________
consensus CCTCCTCACCAAAATGAGCCTGCACAGGTGCCTTAGCCTTGGCAGGGTCTGCAAGCTCAG
 
. : . : . : . : . : . :
rJMSF050B17- CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
rJMFF039E03- CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
rJMFF034M01- CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
rJMFF028O07- CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
rJMFF034E24- CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
rJMFF049O02- CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
rJMFF006I21- CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
rJMFF005B16- CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
JMFN040N14+ CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
JMFS102C12+ CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
JMSF050B17+ CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
JMFF028O07+ CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
JMFF039E03+ CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
JMFF049O02+ CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
JMFF010B02+ CAGGAGGTACTCCATAGAATGNTACAACAGCATCAACACCCGGAANTAAAACAGAACTTG
JMFF024L14+ CAGGAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
JMFF016I24+ CAGGAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
JMFF006I21+ CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
JMFF014P13+ CAGGAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
JMFF005B16+ CTAAAACAGAACTTG
JMFF034E24+ TG
JMFF034M01+ ACTAAAACAGAACTTG
                      ____________________________________________________________
consensus CAGAAGGTACTCCATAGAATGCTACAACAGCATCAACACCCGGAACTAAAACAGAACTTG
 
. : . : . : . : . : . :
rJMSF050B17- CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
rJMFF039E03- CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
rJMFF034M01- CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
rJMFF028O07- CAATGGAAAGAGCACCANCCATGCAATATCCNGTAACTCCAACCTTCTTTGATCC
rJMFF034E24- CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
rJMFF049O02- CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
rJMFF006I21- CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
rJMFF005B16- CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFN040N14+ CAATGGAAAGAGCACAACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFS102C12+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMSF050B17+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFF028O07+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFF039E03+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFF049O02+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFF010B02+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFF024L14+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFF016I24+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFF006I21+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFF014P13+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFF005B16+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFF034E24+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
JMFF034M01+ CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
                      ____________________________________________________________
consensus CAATGGAAAGAGCACCACCCATGCAATATCCAGTAACTCCAACCTTCTTTGATCCATTTG
 
. : . : . : . : . : . :
rJMSF050B17- CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
rJMFF039E03- CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
rJMFF034M01- CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
rJMFF034E24- CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
rJMFF049O02- CCT
rJMFF006I21- CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
rJMFF005B16- CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFN040N14+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFS102C12+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMSF050B17+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFF028O07+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFF039E03+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFF049O02+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFF010B02+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFF024L14+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFF016I24+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFF006I21+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFF014P13+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFF005B16+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFF034E24+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
JMFF034M01+ CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
                      ____________________________________________________________
consensus CCTTGAGCCAGTTCACTGAAGCCTGAATATCTTTGACGGCTCCCTGCCAGTCAAGACCAT
 
. : . : . : . : . : . :
rJMSF050B17- CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
rJMFF039E03- CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATC
rJMFF034M01- CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCANGAA
rJMFF034E24- CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGG
rJMFF006I21- CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
rJMFF005B16- CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFN040N14+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFS102C12+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMSF050B17+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFF028O07+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFF039E03+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFF049O02+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFF010B02+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFF024L14+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFF016I24+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFF006I21+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFF014P13+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFF005B16+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFF034E24+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
JMFF034M01+ CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
                      ____________________________________________________________
consensus CCATCAAATGTTGTGCTTCTGCAACATCTAACCCAACCTTTCCACGGTACAGATCAGGAA
 
. : . : . : . : . : . :
rJMSF050B17- TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
rJMFF034M01- TAAGTGCCTTGTAGCCAGA
rJMFF006I21- TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
rJMFF005B16- TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFN040N14+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFS102C12+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMSF050B17+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFF028O07+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFF039E03+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFF049O02+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFF010B02+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFF024L14+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFF016I24+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFF006I21+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFF014P13+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFF005B16+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFF034E24+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
JMFF034M01+ TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
                      ____________________________________________________________
consensus TAAGTGCCTTGTAGCCAGAGTCAAATTGAGAGATCTTCTGAGCATGGTTTTTAATCTCAA
 
. : . : . : . : . : . :
rJMSF050B17- AGTCCACGCCCCACCATTCCTGA
rJMFF006I21- AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCA
rJMFF005B16- AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFN040N14+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFS102C12+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMSF050B17+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFF028O07+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFF039E03+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFF049O02+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFF010B02+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFF024L14+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFF016I24+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFF006I21+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFF014P13+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFF005B16+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFF034E24+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
JMFF034M01+ AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
                      ____________________________________________________________
consensus AGTCCACGCCCCACCATTCCTGAAGCACAACAATTCCAGGAGCATCTTCTTTTCCAATTA
 
. : . : . : . : . : . :
rJMFF005B16- CATATGCATCAAAT
JMFN040N14+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMFS102C12+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMSF050B17+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMFF028O07+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMFF039E03+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMFF049O02+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMFF010B02+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMFF024L14+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMFF016I24+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMFF006I21+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMFF014P13+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMFF005B16+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMFF034E24+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
JMFF034M01+ CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
                      ____________________________________________________________
consensus CATATGCATCAAATGTAGTGTCGTCTCTCTGAATCTGAACTTTCTTGAAGGGAGCAGATG
 
. : . : . : . : . : . :
JMFN040N14+ AGTCAGCCATGGCGCGAACCTGAAGCCGATAACTGGAGACGGAGAGAGGAGAGACTTTCC
JMFS102C12+ AGTCAGCCATGGCGCGAACCTGAAGCCGATAACCGGAGACGGAGAGAGGAGAGACTTTCC
JMSF050B17+ AGTCAGCCATGGCGCGAACCTGAAGCCGATAACCGGAGACGGAGAGAGGAGAGACTTTCC
JMFF028O07+ AGTCAGCCATGGCGCGAACCTGAAGCCGATAACCGGAGACGGAGAGAGGAGAGACTTTCC
JMFF039E03+ AGTCAGCCATGGCGCGAACCTGAAGCCGATAACCGGAGACGGAGAGAGGAGAGACTTTCC
JMFF049O02+ AGTCAGCCATGGCGCGAACCTGAAGCCGATAACCGGAGACGGAGAGAGGAGAGACTTTCC
JMFF010B02+ AGTCAGCCATTG--------------CGTTAACCGGAGACGGGGAGAGGAGAGACTTTCC
JMFF024L14+ AGTCAGCCATTG--------------CGTTAACCGGAGACGGGGAGAGGAGAGACTTTCC
JMFF016I24+ AGTCAGCCATTG--------------CGTTAACCGGAGACGGGGAGAGGAGAGACTTTCC
JMFF006I21+ AGTCAGCCATGGCGCGAACCTGAAGCCGATAACCGGAGACGGAGAGAGGAGAGACTTTCC
JMFF014P13+ AGTCAGCCATTG--------------CGTTAACCGGAGACGGGGAGAGGAGAGACTTTCC
JMFF005B16+ AGTCAGCCATGGCGCGAACCTGAAGCCGATAACCGGAGACGGAGAGAGGAGAGACTTTCC
JMFF034E24+ AGTCAGCCATGGCGCGAACCTGAAGCCGATAACCGGAGACGGAGAGAGGAGAGACTTTCC
JMFF034M01+ AGTCAGCCATGGCGCGAACCTGAAGCCGATAACCGGAGACGGAGAGAGGAGAGACTTTCC
                      ____________________________________________________________
consensus AGTCAGCCATGGCGCGAACCTGAAGCCGATAACCGGAGACGGAGAGAGGAGAGACTTTCC
 
. : . : . : . : . : . :
JMFN040N14+ GTACAAGCGAGATGGTCGGAGCTGCTCTGAT
JMFS102C12+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCG
JMSF050B17+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAG
JMFF028O07+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAGAACAAGT
JMFF039E03+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAGAACAAGT
JMFF049O02+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAGAATAAGT
JMFF010B02+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAGAACAAGT
JMFF024L14+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAGAACAAGT
JMFF016I24+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAGAACAAGT
JMFF006I21+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAGAATAAGT
JMFF014P13+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAGAACAAGT
JMFF005B16+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAGAACAAGT
JMFF034E24+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAGAACAAGT
JMFF034M01+ GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAGAACAAGTACTAA
                      ____________________________________________________________
consensus GTACAAGCGAGATGGTCGGAGCTGCTCTGATGCCGGCGAAGAATCTAGAACAAGTACTAA