Contig 008824:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034L18Sequence344008824 (9)gb|KDO36272.1|2e-22hypothetical protein CISIN_1g035258mg [Citrus sinensis] gb|KDO36273.1| hypotheti803020213ref|XP_007019806.1|6e-110Cycloartenol synthase 1 isoform 5 [Theobroma cacao] gb|EOY17031.1| Cycloartenol
JMFF039J13Sequence542008824 (9)ref|XP_011094034.1|8e-77PREDICTED: cycloartenol Synthase [Sesamum indicum] ref|XP_011094035.1| PREDICTED
JMFS065E07Sequence617008824 (9)ref|XP_011094034.1|2e-105PREDICTED: cycloartenol Synthase [Sesamum indicum] ref|XP_011094035.1| PREDICTED
JMFS108G10Sequence627008824 (9)ref|XP_011094034.1|3e-99PREDICTED: cycloartenol Synthase [Sesamum indicum] ref|XP_011094035.1| PREDICTED
JMFS142C09Sequence626008824 (9)ref|XP_011094034.1|6e-101PREDICTED: cycloartenol Synthase [Sesamum indicum] ref|XP_011094035.1| PREDICTED
JMSF007I06Sequence251008824 (9)ref|XP_004299756.1|1e-15PREDICTED: cycloartenol synthase 2 [Fragaria vesca subsp. vesca]811009898 (4)ref|XP_008362067.1|3e-93PREDICTED: cycloartenol synthase-like [Malus domestica]
JMSF026H13Sequence673008824 (9)ref|XP_011094034.1|8e-96PREDICTED: cycloartenol Synthase [Sesamum indicum] ref|XP_011094035.1| PREDICTED735009898 (4)ref|XP_008362067.1|7e-98PREDICTED: cycloartenol synthase-like [Malus domestica]
JMSF036D03Sequence687008824 (9)ref|XP_011094034.1|4e-102PREDICTED: cycloartenol Synthase [Sesamum indicum] ref|XP_011094035.1| PREDICTED749009898 (4)ref|XP_008362067.1|3e-89PREDICTED: cycloartenol synthase-like [Malus domestica]
JMSF049H20Sequence690008824 (9)ref|XP_011094034.1|6e-112PREDICTED: cycloartenol Synthase [Sesamum indicum] ref|XP_011094035.1| PREDICTED748009898 (4)ref|XP_008362067.1|3e-94PREDICTED: cycloartenol synthase-like [Malus domestica]

Alignment

This contig is upended


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JMSF049H20+                                                                  TCTCC
                      ____________________________________________________________
consensus                                                                    TCTCC
 
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JMFS065E07+                                        TCCAAGCAACCTCAACGTAACGTAACTCAAG
JMSF049H20+           ATTGCTCCATCTCCATCATTAGCTCCTTCTCCAAGCAACCTCAACGTAACGTAACTCAAG
JMFS108G10+                                                                   CAAG
JMFS142C09+                                                        GTAACGTAACTCAAG
JMSF036D03+                                                        GTAACGTAACTCAAG
                      ____________________________________________________________
consensus             ATTGCTCCATCTCCATCATTAGCTCCTTCTCCAAGCAACCTCAACGTAACGTAACTCAAG
 
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JMFS065E07+           ACCGAACCAAACATGGTACTATGGCTTTCAATATGCAAACCCCAGCCACCATCACTATTC
JMSF049H20+           ACCGAACCAAACATGGTACTATGGCTTTCAATATGCAAACCCCAGCCACCATCACTATTC
JMFS108G10+           ACCGAACCAAACATGGTACTATGGCTTTCAATATGCAAACCCCAGCCACCATCACTATTC
JMFS142C09+           ACCGAACCAAACATGGTACTATGGCTTTCAATATGCAAACCCCAGCCACCATCACTATTC
JMSF036D03+           ACCGAACCAAACATGGTACTATGGCTTTCAATATGCAAACCCCAGCCACCATCACTATTC
JMSF026H13+                 CCAAACATGGTACTATGGCTTTCAATATGCAAACCCCAGCCACCATCACTATTC
                      ____________________________________________________________
consensus             ACCGAACCAAACATGGTACTATGGCTTTCAATATGCAAACCCCAGCCACCATCACTATTC
 
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JMFS065E07+           TGATGATTGTAAAGATAACGGCACATCTCATGTCTATGTTCTTTTGATAACACTGTATTC
JMSF049H20+           TGATGATTGTAAAGATAACGGCACATCTCATGTCTATGTTCTTTTGATAACACTGTATTC
JMFS108G10+           TGATGATTGTAAAGATAACGGCACATCTCATGTCTATGTTCTTTTGATAACACTGTATTC
JMFS142C09+           TGATGATTGTAAAGATAACGGCACATCTCATGTCTATGTTCTTTTGATAACACTGTATTC
JMFF039J13+                                             TATGTTCTTTTGATAACACTGTATTC
JMSF036D03+           TGATGATTGTAAAGATAACGGCACATCTCATGTCTATGTTCTTTTGATAACACTGTATTC
JMSF026H13+           TGATGATTGTAAAGATAACGGCACATCTCANGTCTATGTTCTTTTGATAACACTGTATTC
                      ____________________________________________________________
consensus             TGATGATTGTAAAGATAACGGCACATCTCATGTCTATGTTCTTTTGATAACACTGTATTC
 
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JMFS065E07+           AATGCCCCAGTAACAGAAAGAGCAATTACCAAGCCAGGCAAAAGAAACATGGGGCCTCCA
JMSF049H20+           AATGCCCCAGTAACAGAAAGAGCAATTACCAAGCCAGGCAAAAGAAACATGGGGCCTCCA
JMFS108G10+           AATGCCCCAGTAACAGAAAGAGCAATTACCAAGCCAGGCAAAAGAAACATGGGGCCTCCA
JMFS142C09+           AATGCCCCAGTAACAGAAAGAGCAATTACCAAGCCAGGCAAAAGAAACATGGGGCCTCCA
JMFF039J13+           AATGCCCCAGTAACAGAAAGAGCAATTACCAAGCCAGGCAAAAGAAACATGGGGCCTCCA
JMSF036D03+           AATGCCCCAGTAACAGAAAGAGCAATTACCAAGCCAGGCAAAAGAAACATGGGGCCTCCA
JMSF026H13+           AATGCCCCAGTAACAGAAAGAGCAATTACCAAGCCAGGCAAAAGAAACATGGGGCCTCCA
                      ____________________________________________________________
consensus             AATGCCCCAGTAACAGAAAGAGCAATTACCAAGCCAGGCAAAAGAAACATGGGGCCTCCA
 
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JMFS065E07+           TAGTCTCCTGGCCAGTGACCATCATGAGCTTGTATAGTCGAATAGAAAGTCAGCGCCCTT
JMSF049H20+           TAGTCTCCTGGCCAGTGACCATCATGAGCTTGTATAGTCGAATAGAAAGTCAGCGCCCTT
JMFS108G10+           TAGTCTCCTGGCCAGTGACCATCATGAGCTTGTATAGTCGAATAGAAAGTCAGCGCCCTT
JMFS142C09+           TAGTCTCCTGGCCAGTGACCATCATGAGCTTGTATAGTCGAATAGAAAGTCAGCGCCCTT
JMFF039J13+           TAGTCTCCTGGCCAGTGACCATCATGAGCTTGTATAGTCGAATAGAAAGTCAGCGCCCTT
JMSF036D03+           TAGTCTCCTGGCCAGTGACCATCATGAGCTTGTATAGTCGAATAGAAAGTCAGCGCCCTT
JMSF026H13+           TAGTCTCCTGGCCAGTGACCATCATGAGCTTGTATAGTCGAATAGAAAGTCAGCGCCCTT
                      ____________________________________________________________
consensus             TAGTCTCCTGGCCAGTGACCATCATGAGCTTGTATAGTCGAATAGAAAGTCAGCGCCCTT
 
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JMFS065E07+           TTCAGTGTGGTAGTTACTTTATCTTGTGTAACATCTTCACTGTCCTTGACTGTTACTTGC
JMSF049H20+           TTCAGTGTGGTAGTTACTTTATCTTGTGTAACATCTTCACTGTCCTTGACTGTTACTTGC
JMFS108G10+           TTCAGTGTGGTAGTTACTTTATCTTGTGTAACATCTTCACTGTCCTTGACTGTTACTTGC
JMFS142C09+           TTCAGTGTGGTAGTTACTTTATCTTGTGTAACATCTTCACTGTCCTTGACTGTTACTTGC
JMFF039J13+           TTCAGTGTGGTAGTTACTTTATCTTGTGTAACATCTTCACTGTCCTTGACTGTTACTTGC
JMSF036D03+           TTCAGTGTGGTAGTTACTTTATCTTGTGTAACATCTTCACTGTCCTTGACTGTTACTTGC
JMSF026H13+           TTCAGTGTGGTAGTTACTTTATCTTGTGTAAGATCTTCACTGTCCTTGACTGTTACTTGC
                      ____________________________________________________________
consensus             TTCAGTGTGGTAGTTACTTTATCTTGTGTAACATCTTCACTGTCCTTGACTGTTACTTGC
 
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JMFS065E07+           GGTAACTGTGTGCTTATGGGGTTCTCCTTGGCAAACTGATAACGCATTAGAAGATCACAA
JMSF049H20+           GGTAACTGTGTGCTTATGGGGTTCTCCTTGGCAAACTGATAACGCATTAGAAGATCACAA
JMFS108G10+           GGTAACTGTGTGCTTATGGGGTTCTCCTTGGCAAACTGATAACGCATTAGAAGATCACAA
JMFS142C09+           GGTAACTGTGTGCTTATGGGGTTCTCCTTGGCAAACTGATAACGCATTAGAAGATCACAA
JMFF039J13+           GGTAACTGTGTGCTTATGGGGTTCTCCTTGGCAAACTGATAACGCATTAGAAGATCACAA
JMSF036D03+           GGTAACTGTGTGCTTATGGGGTTCTCCTTGGCAAACTGATAACGCATTAGAAGATCACAA
JMSF026H13+           GGTAACTGTGTGCTTATGGGGTTCTCCTTGGCAAACTGATAACGCATTAGAAGATCACAA
                      ____________________________________________________________
consensus             GGTAACTGTGTGCTTATGGGGTTCTCCTTGGCAAACTGATAACGCATTAGAAGATCACAA
 
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JMFS065E07+           CTGTGCTTCTGTTTGAATCGGTTGTTGCGAAAGTTCTCCCGAAACTTTTCGATCTCCTGC
JMSF049H20+           CTGTGCTTCTGTTTGAATCGGTTGTTGCGAAAGTTCTCCCGAAACTTTTCGATCTCCTGC
JMFS108G10+           CTGTGCTTCTGTTTGAATCGGTTGTTGCGAAAGTTCTCCCGAAACTTTTCGATCTCCTGC
JMFS142C09+           CTGTGCTTCTGTTTGAATCGGTTGTTGCGAAAGTTCTCCCGAAACTTTTCGATCTCCTGC
JMFF039J13+           CTGTGCTTCTGTTTGAATCGGTTGTTGCGAAAGTTCTCCCGAAACTTTTCGATCTCCTGC
JMSF007I06+                                                                CTCCTGC
JMSF036D03+           CTGTGCTTCTGTTTGAATCGGTTGTTGCGAAAGTTCTCCCGAAACTTTTCGATCTCCTGC
JMSF026H13+           CTGTGCTTCTGTTTGAATCGGTTGTTGCGAAAGTTCTCCCGAAACTTTTCGATCTCCTGC
JMFF034L18+                     GTTTGAATCGGTTGTTGCGAAAGTTCTCCCGAAACTTTTCGATCTCCTGC
                      ____________________________________________________________
consensus             CTGTGCTTCTGTTTGAATCGGTTGTTGCGAAAGTTCTCCCGAAACTTTTCGATCTCCTGC
 
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JMFS065E07+           AGCTCTTCCGGACTGCCGAGGCTCGGATCGAACTCCCAAACCTGACGGCCGACGTGGCCG
JMSF049H20+           AGCTCTTCCGGACTGCCGAGGCTCGGATCGAACTCCCAAACCTGACGGCCGACGTGGCCG
JMFS108G10+           AGCTCTTCCGGACTGCCGAGGCTCGGATCGAACTCCCAAACCTGACGGCCGACGTGGCCG
JMFS142C09+           AGCTCTTCCGGACTGCCGAGGCTCGGATCGAACTCCCAAACCTGACGGCCGACGTGGCCG
JMFF039J13+           AGCTCTTCCGGACTGCCGAGGCTCGGATCGAACTCCCAAACCTGACGGCCGACGTGGCCG
JMSF007I06+           AGCTCTTCCGGACTGCCGAGGCTCGGATCGAACTCCCAAACCTGACGGCCGACGTGGCCG
JMSF036D03+           AGCTCTTCCGGACTGCCGAGGCTCGGATCGAACTCCCAAACCTGACGGCCGACGTGGCCG
JMSF026H13+           AGCTCTTCCGGACTGCCGAGGCTCGGATCGAACTCCCAAACCTGACGGCCGACGTGGCCG
JMFF034L18+           AGCTCTTCCGGACTGCCGAGGCTCGGATCGAACTCCCAAACCTGACGGCCGACGTGGCCG
                      ____________________________________________________________
consensus             AGCTCTTCCGGACTGCCGAGGCTCGGATCGAACTCCCAAACCTGACGGCCGACGTGGCCG
 
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JMFS065E07+           TTCAGCGTCCGCAGCCATGGGCTCCCTCCTTCCGCGATCTTCAGCTTCCACATTCTTCTT
JMSF049H20+           TTCAGCGTCCGCAGCCATGGGCTCCCTCCTTCCGCGATCTTCAGCTTCCACATTCTTCTT
JMFS108G10+           TTCAGCGTCCGCAGCCATGGGCTCCCTCCTTCCGCGATCTTCAGCTTCCACATTCTTCTT
JMFS142C09+           TTCAGCGTCCGCAGCCATGGGCTCCCTCCTTCCGCGATCTTCAGCTTCCACATTCTTCTT
JMFF039J13+           TTCAGCGTCCGCAGCCATGGGCTCCCTCCTTCCGCGATCTTCAGCTTCCACATTCTTCTT
JMSF007I06+           TTCAGCGTCCGCAGCCATGGGCTCCCTCCTTCCGCGATCTTCAGCTTCCACATTCTTCTT
JMSF036D03+           TTCAGCGTCCGCAGCCATGGGCTCCCTCCTTCCGCGATCTTCAGCTTCCACATTCTTCTT
JMSF026H13+           TTCAGCGTCCGCAGCCATGGGCTCCCTCCTTCCGCGATCTTCAGCTTCCACATTCTTCTT
JMFF034L18+           TTCAGCGTCCGCAGCCATGGGCTCCCTCCTTCCGCGATCTTCAGCTTCCACATTCTTCTT
                      ____________________________________________________________
consensus             TTCAGCGTCCGCAGCCATGGGCTCCCTCCTTCCGCGATCTTCAGCTTCCACATTCTTCTT
 
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JMFS065E07+           C------AATAGATGAGTGACGAGTTGAGAGAGTAAAGCTTTGGGTGACGGC        
JMSF049H20+           C------AATAGATGAGTGACGAGTTGAGAGAGTAAAGCTTTGGGTGACGGCGATAGTTA
JMFS108G10+           CACTATAAATAGATGAGTGACGAGTTGAGAGAGTAAAGCTTTGGGTGACGGCGATAGTTA
JMFS142C09+           CACTATAAATAGATGAGTGACGAGTTGAGAGAGTAAAGCTTTGGGTGACGGCGATAGTTA
JMFF039J13+           CACTATAAATAGATGAGTGACGAGTTGAGAGAGTAAAGCTTTGGGTGACGGCGATAGTTA
JMSF007I06+           C------AATAGATGAGTGACGAGTTGAGAGAGTAAAGCTTTGGGTGACGGCGATAGTTA
JMSF036D03+           C------AATAGATGAGTGACGAGTTGAGAGAGTAAAGCTTTGGGTGACGGCGATAGTTA
JMSF026H13+           C------AATAGATGAGTGACGAGTTGAGAGAGTAAAGCTTTGGGTGACGGCGATAGTTA
JMFF034L18+           C------AATAGATGAGTGACGAGTTGAGAGAGTAAAGCTTTGGGTGACGGCGATAGTTA
                      ____________________________________________________________
consensus             C------AATAGATGAGTGACGAGTTGAGAGAGTAAAGCTTTGGGTGACGGCGATAGTTA
 
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JMSF049H20+           TTAAGCAGCGACGATGAAGAAAACTGACCC                              
JMFS108G10+           TTAAGCAGCGACGATGAAGAAAA                                     
JMFS142C09+           TTAAGCAGCGA                                                 
JMFF039J13+           TTAAGCAGCGACGATGAAGAAAACTGACCCAAGTGT                        
JMSF007I06+           TTAAGCAGCGACGATGAAGAAAACTGACCCAAGTGTTGGTTGGGATTTCCCTTCCAGCAA
JMSF036D03+           TTAAGCAGCGACGATGAAGAAAACTGACCCAAGTGTTGGTTGGGATTTCCCTTCCAGCAA
JMSF026H13+           TTAAGCAGCGACGATGAAGAAAACTGACCCAAGTGTTGGTTGGGATTTCCCTTCCAGCAA
JMFF034L18+           TTAAGCAGCGACGATGAAGAAAACTGACCCAAGTGTTGGTTGGGATTTCCCTTCCAGCAA
                      ____________________________________________________________
consensus             TTAAGCAGCGACGATGAAGAAAACTGACCCAAGTGTTGGTTGGGATTTCCCTTCCAGCAA
 
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JMSF007I06+           TGCTATGCT                                                   
JMSF036D03+           TGCTATGCT                                                   
JMSF026H13+           TGCTATGCTAGTATGCTGACGGCT                                    
JMFF034L18+           TGCTATGCTAGTATGCTGACGGCTGCCAGCCTGGAGGGAAGACGTGAAACGTGCAAATGT
                      ____________________________________________________________
consensus             TGCTATGCTAGTATGCTGACGGCTGCCAGCCTGGAGGGAAGACGTGAAACGTGCAAATGT