Contig 008822:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034H20Sequence542008822 (2)ref|XP_009621793.1|6e-20PREDICTED: GATA transcription factor 11-like isoform X1 [Nicotiana tomentosifor753014886ref|XP_009795846.1|1e-56PREDICTED: GATA transcription factor 11-like isoform X2 [Nicotiana sylvestris]
JMFS149C11Sequence128008822 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF034H20+ GC
                      ____________________________________________________________
consensus GC
 
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JMFF034H20+ AGTAGAAGAAGATATAAGAGATGCCAACAGCCATGGATTGGTGGAGGGTCGGGTGCGCTT
                      ____________________________________________________________
consensus AGTAGAAGAAGATATAAGAGATGCCAACAGCCATGGATTGGTGGAGGGTCGGGTGCGCTT
 
. : . : . : . : . : . :
JMFF034H20+ GGTTCGAGTTCGTACTGGAACAGCAACGCCGGTTTTGACTGGGATGGCCTTTCCACCTGA
                      ____________________________________________________________
consensus GGTTCGAGTTCGTACTGGAACAGCAACGCCGGTTTTGACTGGGATGGCCTTTCCACCTGA
 
. : . : . : . : . : . :
JMFF034H20+ GCAAGAGGCACTGCTCTCAAGGACAGAAACCGGGCTTTGTGTCTGGAACATAACAGCCTC
                      ____________________________________________________________
consensus GCAAGAGGCACTGCTCTCAAGGACAGAAACCGGGCTTTGTGTCTGGAACATAACAGCCTC
 
. : . : . : . : . : . :
JMFF034H20+ CTGCGCGTCAGAATATTTATTAGAAGGCTTCAACTTGAGTGCTGCATTGGAGAAGTTGTT
                      ____________________________________________________________
consensus CTGCGCGTCAGAATATTTATTAGAAGGCTTCAACTTGAGTGCTGCATTGGAGAAGTTGTT
 
. : . : . : . : . : . :
JMFF034H20+ TTGCATAATATTAGCTTGTGGAACTGGGAGAAAACCCGTTAGGGCGTCAGAAGGGATTGG
                      ____________________________________________________________
consensus TTGCATAATATTAGCTTGTGGAACTGGGAGAAAACCCGTTAGGGCGTCAGAAGGGATTGG
 
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JMFF034H20+ CCCCAACTTACTAGCATCAAAATCAAAATCATCAATAAGGGCGTCCCCGTCCCCGTCCCC
                      ____________________________________________________________
consensus CCCCAACTTACTAGCATCAAAATCAAAATCATCAATAAGGGCGTCCCCGTCCCCGTCCCC
 
. : . : . : . : . : . :
JMFS149C11+ GGAAATCAAGAACATTAAGCATGTCCATAACATTGTCATAGTC
JMFF034H20+ TTCCAAGCATTCCGGGGGGAAATCAAGAACATTAAGCATGTCCATAACATTGTCATAGTC
                      ____________________________________________________________
consensus TTCCAAGCATTCCGGGGGGAAATCAAGAACATTAAGCATGTCCATAACATTGTCATAGTC
 
. : . : . : . : . : . :
JMFS149C11+ ATAGTCATCCCCTCCACCCGCAATCCCATCCCAATAAGCAGCTTGTTCAACCATACCCAT
JMFF034H20+ ATAGTCATCCCCTCCACCCGCAATCCCATCCCAATAAGCAGCTTGTTCAACCATACCCAT
                      ____________________________________________________________
consensus ATAGTCATCCCCTCCACCCGCAATCCCATCCCAATAAGCAGCTTGTTCAACCATACCCAT
 
. : . : . : . : . : . :
JMFS149C11+ CTTCATGAAGCTTAAACCCTATTAA
JMFF034H20+ CTTCATGAAGCTTAAACCCTATTAAATCGTAGAGAAAACCATTGGCACTTTCCCAGGAGT
                      ____________________________________________________________
consensus CTTCATGAAGCTTAAACCCTATTAAATCGTAGAGAAAACCATTGGCACTTTCCCAGGAGT