Contig 008817:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032K16Sequence567008817 (2)gb|KHG21031.1|2e-12Microtubule-associated tumor suppressor 1 [Gossypium arboreum]725008817 (2)emb|CDP00763.1|8e-11unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF032K16-                                                        ANTTTTTTTTTTCT
                      ____________________________________________________________
consensus                                                           ANTTTTTTTTTTCT
 
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rJMFF032K16-          ATGAAACTATATATGTAATTACATGATCCATATCTGCTGGAAGTGCCAATCTATCAAAGC
                      ____________________________________________________________
consensus             ATGAAACTATATATGTAATTACATGATCCATATCTGCTGGAAGTGCCAATCTATCAAAGC
 
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rJMFF032K16-          AACATCATAAAATATATAGCCATTTTGTGCTGACAAGAAAAGGGAGAGGCATACATATAT
                      ____________________________________________________________
consensus             AACATCATAAAATATATAGCCATTTTGTGCTGACAAGAAAAGGGAGAGGCATACATATAT
 
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rJMFF032K16-          GTATATATAGGATCTGACCTGANAACGGGCGTGGAAACTCGCGCATTTCATGTANAAACA
JMFF032K16+                                            GAAACTCGCGCATTTCATGTAGAAACA
                      ____________________________________________________________
consensus             GTATATATAGGATCTGACCTGANAACGGGCGTGGAAACTCGCGCATTTCATGTAGAAACA
 
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rJMFF032K16-          CCAACCACAACACAGGTTATTTGCGAGCTACAACCCGAGTGGACGCCCCGGGGCACATTG
JMFF032K16+           CCAACCACAACACAGGTTATTTGCGAGCTACAACCCGAGTGGACGCCCCGGGGCACATTG
                      ____________________________________________________________
consensus             CCAACCACAACACAGGTTATTTGCGAGCTACAACCCGAGTGGACGCCCCGGGGCACATTG
 
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rJMFF032K16-          CTTCTCAAATCAGTTCTGCCATTTCTCCCAGCACTGACTTTTGGCTTTACCTCAACCTTG
JMFF032K16+           CTTCTCAGATCAGTTCTGCCATTTCTCCCAGCACTGACTTTTGGCTTTACCTCAACCTTG
                      ____________________________________________________________
consensus             CTTCTCAGATCAGTTCTGCCATTTCTCCCAGCACTGACTTTTGGCTTTACCTCAACCTTG
 
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rJMFF032K16-          TGGCATTATTCACCTTGTTCACTCCCAATCCTCTTTGATTCAGCGAACTCGTGAGCTGTT
JMFF032K16+           TGGCATTATTCACCTTGTTCACTCCCAATCCTCTTTGATTCAGCGAACTCGTGAGCTGTT
                      ____________________________________________________________
consensus             TGGCATTATTCACCTTGTTCACTCCCAATCCTCTTTGATTCAGCGAACTCGTGAGCTGTT
 
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rJMFF032K16-          TCTTTTCTTCGTTGTTCTTCCTGGTTCCTCGGGTATTGGTGGTCGTTGGAAGTGCANACN
JMFF032K16+           TCTTTTCTTCGTTGTTCTTCCTGGTTCCTCGGGTATTGGTGGTCGTTGGAAGTGCAGACG
                      ____________________________________________________________
consensus             TCTTTTCTTCGTTGTTCTTCCTGGTTCCTCGGGTATTGGTGGTCGTTGGAAGTGCAGACG
 
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rJMFF032K16-          ANACACTGCTATCTGAGGACACCGNGGGCCTATACTTGGTCGTCGTAAAGGTTTGCATTG
JMFF032K16+           AGACACTGCTATCTGAGGACACCGTGGGCCTATACTTGGTCGTCGTAGAGGTTTGCATTG
                      ____________________________________________________________
consensus             AGACACTGCTATCTGAGGACACCGTGGGCCTATACTTGGTCGTCGTAGAGGTTTGCATTG
 
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rJMFF032K16-          AACAANACGGGGAACTTTCTGCAGCTACTGTTCTTGGANATGCACGCAGGTAGTGCTGTG
JMFF032K16+           AACAAGACGGGGAACTTTCTGCAGCTACTGTTCTTGGAGATGCACGCAGGTAGTGCTGTG
                      ____________________________________________________________
consensus             AACAAGACGGGGAACTTTCTGCAGCTACTGTTCTTGGAGATGCACGCAGGTAGTGCTGTG
 
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rJMFF032K16-          GCTTCCTCGGTGTGGATTTACTTGCAGGTGTCTTAAATTTATCTGATAGTGGCCTAGCTT
JMFF032K16+           GCTTCCTCGGTGTGGATTTACTTGCAGGTGTCTTAAATTTATCTGATAGTGGCCTAGCTT
                      ____________________________________________________________
consensus             GCTTCCTCGGTGTGGATTTACTTGCAGGTGTCTTAAATTTATCTGATAGTGGCCTAGCTT
 
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rJMFF032K16-          CATGGTAAAAGGAAGGCAGGGGACTTGCTTTAAAATTAAGGTTTCTTCTCAATTGCCTTG
JMFF032K16+           CATGGTAAAAGGAAGGCAGGGGACTTGCTTTAAAATTAAGGTTTCTTCTCAATTGCCTTG
                      ____________________________________________________________
consensus             CATGGTAAAAGGAAGGCAGGGGACTTGCTTTAAAATTAAGGTTTCTTCTCAATTGCCTTG
 
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rJMFF032K16-          TCTCTACTTCTGTCTTCTTCTGTCTTCTGGCTTGAATTTGTAGCATCTCAG         
JMFF032K16+           TCTCTACTTCTGTCTTCTTCTGTCTTCTGGCTTGAATTTGTAGCATCTCAGCCTCCTTAG
                      ____________________________________________________________
consensus             TCTCTACTTCTGTCTTCTTCTGTCTTCTGGCTTGAATTTGTAGCATCTCAGCCTCCTTAG