Contig 008816:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF032G09-                                                        AGGTGTTTTTACCA
                      ____________________________________________________________
consensus                                                           AGGTGTTTTTACCA
 
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rJMFF032G09-          TACATGACAGTGCAGCCCACAACTTCAATGAAGCTAATTGCAGAAGTATGATAATTCATT
rJMSF030E05-                 CAGTGCAGCCCACAACTTCAATGAAGCTAATTGCAGAAGTATGATAATTCATT
                      ____________________________________________________________
consensus             TACATGACAGTGCAGCCCACAACTTCAATGAAGCTAATTGCAGAAGTATGATAATTCATT
 
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rJMFF032G09-          AGAACTTTGAACCCAGTATTCAATTTATTTGAATTTAGAAGGTTTAGTCATCCATGGCCA
rJMSF030E05-          AGAACTTTGAACCCAGTATTCAATTTATTTGAATTTAGAAGGTTTAGTCATCCATGGCCA
                      ____________________________________________________________
consensus             AGAACTTTGAACCCAGTATTCAATTTATTTGAATTTAGAAGGTTTAGTCATCCATGGCCA
 
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rJMFF032G09-          AACCTCTAAAATGACTCTGTCACATCCCTTCATGATTAACCCCGGTGGGCATCAAGAAAG
rJMSF030E05-          AACCTCTAAAATGACTCTGTCACATCCCTTCATGATTAACCCCGGTGGGCATCAAGAAAG
                      ____________________________________________________________
consensus             AACCTCTAAAATGACTCTGTCACATCCCTTCATGATTAACCCCGGTGGGCATCAAGAAAG
 
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rJMFF032G09-          TTGAGGATCAGCTTATTCACCTCTTCAGGCAATTGCTCCTGAAGAAAATGGCTTCCTTCA
rJMSF030E05-          TTGAGGATCAGCTTATTCACCTCTTCAGGCAATTGCTCCTGAAGAAAATGGCTTCCTTCA
                      ____________________________________________________________
consensus             TTGAGGATCAGCTTATTCACCTCTTCAGGCAATTGCTCCTGAAGAAAATGGCTTCCTTCA
 
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rJMFF032G09-          GGTATATACACTATCTCCACATTAGGCACAAAAGCTTTCAGCATCCCACTGCTTATGTAC
rJMSF030E05-          GGTATATACACTATCTCCACATTAGGCACAAAAGCTTTCAGCATCCCACTGCTTATGTAC
                      ____________________________________________________________
consensus             GGTATATACACTATCTCCACATTAGGCACAAAAGCTTTCAGCATCCCACTGCTTATGTAC
 
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rJMFF032G09-          TCTTCCATTCCTGGGAATTTCAGCACATAATCCTTCTCACCTGCAATGAACAATGCAGGG
rJMSF030E05-          TCTTCCATTCCTGGGAATTTCAGCACATAATCCTTCTCACCTGCAATGAACAATGCAGGG
                      ____________________________________________________________
consensus             TCTTCCATTCCTGGGAATTTCAGCACATAATCCTTCTCACCTGCAATGAACAATGCAGGG
 
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rJMFF032G09-          ACTTTGATTCTTGGCTCAGCTGGTAGCTCAATATGTTCATCCCCAAGCGACCTGTAAGGA
rJMSF030E05-          ACTTTGATTCTTGGCTCAGCTGGTAGCTCAATATGTTCATCCCCAAGCGACCTGTAAGGA
                      ____________________________________________________________
consensus             ACTTTGATTCTTGGCTCAGCTGGTAGCTCAATATGTTCATCCCCAAGCGACCTGTAAGGA
 
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rJMFF032G09-          ACCTTCAATGCAGTTCGGAATCCAGATTTCTCATACAGAGCTCCATAGGCTTCCAGGTCT
rJMSF030E05-          ACCTTCAATGCAGTTCGGAATCCAGATTTCTCATACAGAGCTCCATAGGCTTCCAGGTCT
                      ____________________________________________________________
consensus             ACCTTCAATGCAGTTCGGAATCCAGATTTCTCATACAGAGCTCCATAGGCTTCCAGGTCT
 
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rJMFF032G09-          TCTTCGGTGAACCAAGGGGGTAGGGGGAGTGGAAGGCTCCACCATGTCCATGATCTCCTG
rJMSF030E05-          TCTTCGGTGAACCAAGGGGGTA-GGGGAGTGGAAGGCTCCACCATGTCCATGATCTCCTG
JMSF030E05+                                              GCTCCACCATGTCCATGATCTCCTG
                      ____________________________________________________________
consensus             TCTTCGGTGAACCAAGGGGGTAGGGGGAGTGGAAGGCTCCACCATGTCCATGATCTCCTG
 
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rJMFF032G09-          CTTTTCATTAGCAATTGGTATCTCACTTCTGGAGAAAAGGGATGTAGATGTTCTTCACAA
rJMSF030E05-          CTTTTCATTAGCAATTGGTATCTCACTTCTGGAGAAAA-GGATGTAGATGTTCTTCACAA
JMSF030E05+           CTTTTCATTAGCAATTGGTATCTCACTTCTGGAGAAAA-GGATGTAGATGTTCTTCACAA
                      ____________________________________________________________
consensus             CTTTTCATTAGCAATTGGTATCTCACTTCTGGAGAAAA-GGATGTAGATGTTCTTCACAA
 
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rJMFF032G09-          CAGTTTTGGCATCGAGACGACCAAAGTCAGCTTCAGCTCGCCCAGGCTCCCTCCATCTTG
rJMSF030E05-          CAGTTTTGGCATCGAGACGACCAAAGTCAGCTTCAGCTCGCCCAGGCTCCCTCCATCTTG
JMSF030E05+           CAGTTTTGGCATCGAGACGACCAAAGTCAGCTTCAGCTCGCCCAGGCTCCCTCCATCTTG
JMFF032G09+                  GGCATCGAGACGACCAAAGTCAGCTTCAGCTCGCCCAGGCTCCCTCCATCTTG
                      ____________________________________________________________
consensus             CAGTTTTGGCATCGAGACGACCAAAGTCAGCTTCAGCTCGCCCAGGCTCCCTCCATCTTG
 
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rJMFF032G09-          AAATATAGAAACCTTCAGGCAGCTTTTCAGTATATGTANAAGCACGAGCAATCATGAATG
rJMSF030E05-          AAATATAGAAACCTTCAGGCAGCTTTTCAGTATATGTAGAAGCACGAGCAATCATGAATG
JMSF030E05+           AAATATAGAAACCTTCAGGCAGCTTTTCAGTATATGTAGAAGCACGAGCAATCATGAATG
JMFF032G09+           AAATATAGAAACCTTCAGGCAGCTTTTCAGTATATGTAGAAGCACGAGCAATCATGAATG
                      ____________________________________________________________
consensus             AAATATAGAAACCTTCAGGCAGCTTTTCAGTATATGTAGAAGCACGAGCAATCATGAATG
 
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rJMFF032G09-          GCACATCCAATGTAACACACCCAGCTACCCTCTCCTCATGGA                  
rJMSF030E05-          GCACATCCAATGTAACACACCCAGCTACCCTCTCCTCATGGA                  
JMSF030E05+           GCACATCCAATGTAACACACCCAGCTACCCTCTCCTCATGGAGAAGGCATAAAAAGGTCA
JMFF032G09+           GCACATCCAATGTAACACACCCAGCTACCCTCTCCTCATGGAGAAGGCATAAAAAGGTCA
                      ____________________________________________________________
consensus             GCACATCCAATGTAACACACCCAGCTACCCTCTCCTCATGGAGAAGGCATAAAAAGGTCA
 
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JMSF030E05+           GAACAGGCGACCCAAAATCTTTCCCAACCAGAAAAACCTTTGGGATACTAAGAGTATCCA
JMFF032G09+           GAACAGGCGACCCAAAATCTTTCCCAACCAGAAAAACCTTTGGGATACTAAGAGTATCCA
                      ____________________________________________________________
consensus             GAACAGGCGACCCAAAATCTTTCCCAACCAGAAAAACCTTTGGGATACTAAGAGTATCCA
 
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JMSF030E05+           GCAGAGCAGCAATGTCATTGACAATTTCAAGAAAGGTGGTCTTCTCAGGTTGGGGTGGTT
JMFF032G09+           GCAGAGCAGCAATGTCATTGACAATTTCAAGAAAGGTGGTCTTCTCAGGTTGGGGTGGTT
                      ____________________________________________________________
consensus             GCAGAGCAGCAATGTCATTGACAATTTCAAGAAAGGTGGTCTTCTCAGGTTGGGGTGGTT
 
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JMSF030E05+           GATCCGATAACCCATACCCTCTGTAATCGACGGCAATGGCTCTGTAACCGGCTTTGGCCA
JMFF032G09+           GATCCGATAACCCATACCCTCTGTAATCGACGGCAATGGCTCTGTAACCGGCTTTGGCCA
                      ____________________________________________________________
consensus             GATCCGATAACCCATACCCTCTGTAATCGACGGCAATGGCTCTGTAACCGGCTTTGGCCA
 
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JMSF030E05+           CCGCCAGCATCTGGAAGCGCCAGGAGTACCAAATCTCAGGGAAGCCATGTAAGAACAGCA
JMFF032G09+           CCGCCAGCATCTGGAAGCGCCAGGAGTACCAAATCTCAGGGAAGCCATGTAAGAACAGCA
                      ____________________________________________________________
consensus             CCGCCAGCATCTGGAAGCGCCAGGAGTACCAAATCTCAGGGAAGCCATGTAAGAACAGCA
 
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JMSF030E05+           CAACTGGACCCGACCCACTCCCAATCTCAGCTACGTGGATCTTTAGCCCGTTCACCTCTA
JMFF032G09+           CAACTGGACCCGACCCACTCCCAATCTCAGCTACGTGGATCTTTAGCCCGTTCACCTCTA
                      ____________________________________________________________
consensus             CAACTGGACCCGACCCACTCCCAATCTCAGCTACGTGGATCTTTAGCCCGTTCACCTCTA
 
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JMSF030E05+           TGAACTTGTGCTCAATTTCATCCATTTCTTTCTTTCTTTCTTTCTATCTCTTGTCTGAAA
JMFF032G09+           TGAACTTGTGCTCAATTTCATCCATTTCTTTCTTTCTTTCTTTCTATCTCTTGTCTGAAA
                      ____________________________________________________________
consensus             TGAACTTGTGCTCAATTTCATCCATTTCTTTCTTTCTTTCTTTCTATCTCTTGTCTGAAA
 
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JMSF030E05+           CAGGTCGATAGAGAGTTCAGAACGCGTTAGTG                            
JMFF032G09+           CAGGTCGATAGAGAGTTCAGAACGCGTTAGTGTGTGGTCTGTGAAGAGGCGGGCGACAGT
                      ____________________________________________________________
consensus             CAGGTCGATAGAGAGTTCAGAACGCGTTAGTGTGTGGTCTGTGAAGAGGCGGGCGACAGT