Contig 008812:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031G22Sequence440008812 (2)ref|XP_010323128.1|52.0PREDICTED: uncharacterized protein LOC101251813 [Solanum lycopersicum] ref|XP_01396008812 (2)ref|XP_010323128.1|52.0PREDICTED: uncharacterized protein LOC101251813 [Solanum lycopersicum] ref|XP_01

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF031G22+ ATTTATCGAGCCATTCAACG
JMFF031G22- ATTTATCGAGCCATTCAACG
                      ____________________________________________________________
consensus ATTTATCGAGCCATTCAACG
 
. : . : . : . : . : . :
rJMFF031G22+ TTAGTTACTATATCGGCTAAACATCGTTCAAATTTCTATAGGAATCGTTGTTGGTATGGA
JMFF031G22- TTAGTTACTATATCGGCTAAACATCGTTCAAATTTCTATAGGAATCGTTGTTGGTATGGA
                      ____________________________________________________________
consensus TTAGTTACTATATCGGCTAAACATCGTTCAAATTTCTATAGGAATCGTTGTTGGTATGGA
 
. : . : . : . : . : . :
rJMFF031G22+ TAACAAGGAAGTTGGGAAGGAGGTTTTTGAGGAAGCCATAAGGGAGTCACTGATTTCAAT
JMFF031G22- TAACAAGGAAGTTGGGAAGGAGGTTTTTGAGGAAGCCATAAGGGAGTCACTGATTTCAAT
                      ____________________________________________________________
consensus TAACAAGGAAGTTGGGAAGGAGGTTTTTGAGGAAGCCATAAGGGAGTCACTGATTTCAAT
 
. : . : . : . : . : . :
rJMFF031G22+ ATCTCACTCAGCTCCAGCAAGGAAGAAAGCTGCTGCAGCTTCTGGTTTGGATTTGCAGAA
JMFF031G22- ATCTCACTCAGCTCCAGCAAGGAAGAAAGCTGCTGCAGCTTCTGGTTTGGATTTGCAGAA
                      ____________________________________________________________
consensus ATCTCACTCAGCTCCAGCAAGGAAGAAAGCTGCTGCAGCTTCTGGTTTGGATTTGCAGAA
 
. : . : . : . : . : . :
rJMFF031G22+ TGGGGTGAAGGGTGTAGGAGATGGTAATGGTGATGACAAGTACAGGTCTAAGTTGATTTC
JMFF031G22- TGGGGTGAAGGGTGTAGGAGATGGTAATGGTGATGACAAGTACAGGTCTAAGTTGATTTC
                      ____________________________________________________________
consensus TGGGGTGAAGGGTGTAGGAGATGGTAATGGTGATGACAAGTACAGGTCTAAGTTGATTTC
 
. : . : . : . : . : . :
rJMFF031G22+ AATATCCTTCTCTAACTCACCAGATGCCAAAGTTTAACCTGGAGAAGTTTAGGGATGGCT
JMFF031G22- AATATCCTTCTCTAACTCACCAGATGCCAAAGTTTAACCTGGAGAAGTTTAGGGATGGCT
                      ____________________________________________________________
consensus AATATCCTTCTCTAACTCACCAGATGCCAAAGTTTAACCTGGAGAAGTTTAGGGATGGCT
 
. : . : . : . : . : . :
rJMFF031G22+ TTGCTGATATAGCCAGTTTTCATGTTTCTGCTATGTTGTTGTCATATGTTGTTATTTGGA
JMFF031G22- TTGCTGATATAGCCAGTTTTCATGTTTCTGCTATGTTGTTGTCATATGTTGTTATTTGGA
                      ____________________________________________________________
consensus TTGCTGATATAGCCAGTTTTCATGTTTCTGCTATGTTGTTGTCATATGTTGTTATTTGGA
 
. : . : . : . : . : . :
rJMFF031G22+ GAGGAAGCAAAACTAT
JMFF031G22- GAGGAAGCAAAACTATGCTTTCATCTTTTCATATCAAAAGCTTGCTTAATANNAAAAAAA
                      ____________________________________________________________
consensus GAGGAAGCAAAACTATGCTTTCATCTTTTCATATCAAAAGCTTGCTTAATANNAAAAAAA