| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018H13 | Sequence | 553 | 008810 (8) | ref|XP_008391326.1| | 1e-63 | PREDICTED: beta-galactosidase 1 [Malus domestica] | 765 | 006990 (5) | gb|AHG94611.1| | 2e-71 | beta-galactosidase [Camellia sinensis] |
| JMFF031F22 | Sequence | 488 | 008810 (8) | ref|XP_008391326.1| | 9e-65 | PREDICTED: beta-galactosidase 1 [Malus domestica] | 751 | 006990 (5) | gb|AHG94611.1| | 2e-89 | beta-galactosidase [Camellia sinensis] |
| JMFF033M24 | Sequence | 489 | 008810 (8) | ref|XP_008391326.1| | 2e-58 | PREDICTED: beta-galactosidase 1 [Malus domestica] | 667 | 006990 (5) | gb|AHG94611.1| | 3e-70 | beta-galactosidase [Camellia sinensis] |
| JMFF048P10 | Sequence | 476 | 008810 (8) | ref|XP_008391326.1| | 2e-62 | PREDICTED: beta-galactosidase 1 [Malus domestica] | 394 | 006990 (5) | gb|EYU45851.1| | 2e-18 | hypothetical protein MIMGU_mgv1a002308mg [Erythranthe guttata] |
| JMFS040F01 | Sequence | 452 | 008810 (8) | gb|AIU34464.1| | 4e-67 | putative beta-galactosidase 1 precursor, partial [Taraxacum brevicorniculatum] | |||||
| JMFS072F04 | Sequence | 530 | 008810 (8) | ref|XP_008391326.1| | 1e-61 | PREDICTED: beta-galactosidase 1 [Malus domestica] | |||||
| JMFS079H10 | Sequence | 532 | 008810 (8) | gb|AIU34464.1| | 1e-76 | putative beta-galactosidase 1 precursor, partial [Taraxacum brevicorniculatum] | |||||
| JMSF021F22 | Sequence | 617 | 008810 (8) | gb|AIU34464.1| | 3e-100 | putative beta-galactosidase 1 precursor, partial [Taraxacum brevicorniculatum] | 839 | 006990 (5) | gb|AHG94611.1| | 1e-95 | beta-galactosidase [Camellia sinensis] |
This contig is upended
. : . : . : . : . : . :
JMSF021F22+ CAGTTCATACTCCATCGGTCCATATTCGTTCTCAATCTGGGATAAGATTATT
____________________________________________________________
consensus CAGTTCATACTCCATCGGTCCATATTCGTTCTCAATCTGGGATAAGATTATT
. : . : . : . : . : . :
JMSF021F22+ GGACCACCCTGAGATGCATACAGCCTTTCGGTTTTCATCATATCGACAATCATGGTTGTG
JMFS079H10+ GTG
____________________________________________________________
consensus GGACCACCCTGAGATGCATACAGCCTTTCGGTTTTCATCATATCGACAATCATGGTTGTG
. : . : . : . : . : . :
JMSF021F22+ AACTTTTGCATTGCAGACTTGAAAGGTTCATTATCTGTTCTGAAACTAATCCCTGGAACA
JMFS040F01+ TGAAACTAATCCCTGGAACA
JMFF018H13+ GGAACA
JMFS079H10+ AACTTTTGCATGGCAGACTTGAAAGGTTCATTATCTGTTCTGAAACTAATCCCTGGAACA
JMFF031F22+ CTGGAACA
____________________________________________________________
consensus AACTTTTGCATTGCAGACTTGAAAGGTTCATTATCTGTTCTGAAACTAATCCCTGGAACA
. : . : . : . : . : . :
JMSF021F22+ AACTTCAGCCAAACTGGAAATCCCCCAAAATTCCATTCCCCACAAGCATAAGGCCCAATC
JMFS040F01+ AACTTCAGCCAAACTGGAAATCCCCCAAAATTCCATTCCCCACAAGCATAAGGCCCAATC
JMFF018H13+ AACTTCAGCCAAACTGGAAATCCCCCAAAATTCCATTCCCCACAAGCATAAGGCCCAATC
JMFS072F04+ AGCCAAACTGGAAATCCCCCAAAATTCCATTCCCCACAAGCATAAGGCCCAATC
JMFF033M24+ TGGAAATCCCCCAAAATTCCATTCCCCACAAGCATAAGGCCCAATC
JMFS079H10+ AACTTCAGCCAAACTGGAAATCCCCCAAAATTCCATTCCCCACAAGCATAAGGCCCAATC
JMFF048P10+ TCAGCCAAACTGGAAATCCCCCAAAATTCCATTCCCCACAAGCATAAGGCCCAATC
JMFF031F22+ AACTTCAGCCAAACTGGAAATCCCCCAAAATTCCATTCCCCACAAGCATAAGGCCCAATC
____________________________________________________________
consensus AACTTCAGCCAAACTGGAAATCCCCCAAAATTCCATTCCCCACAAGCATAAGGCCCAATC
. : . : . : . : . : . :
JMSF021F22+ CTGAGATGAACATAAAGTCCAGCTTGCTGTGCCAGCTTAATGAACTTCACAACATCATAC
JMFS040F01+ CTGAGATGAACATAAAGTCCAGCTTGCTGTGCCAGCTTAATGAACTTCACAACATCATAC
JMFF018H13+ CTGAGATGAACATAAAGTCCAGCTTGCTGTGCCAGCTTAATGAACTTCACAACATCATAC
JMFS072F04+ CTGAGATGAACATAAAGTCCAGCTTGCTGTGCCAGCTTAATGAACTTCACAACATCATAC
JMFF033M24+ NTGAGATGAACATAAAGTCCAGCTTGCTGTGCCAGCTTAATGAACTTCACAACATCATAC
JMFS079H10+ CTGAGATGAACATAAAGTCCAGCTTGCTGTGCCAGCTTAATGAACTTCACAACATCATAC
JMFF048P10+ CTGAGATGAACATAAAGTCCAGCTTGCTGTGCCAGCTTAATGAACTTCACAACATCATAC
JMFF031F22+ CTGAGATGAACATAAAGTCCAGCTTGCTGTGCCAGCTTAATGAACTTCACAACATCATAC
____________________________________________________________
consensus CTGAGATGAACATAAAGTCCAGCTTGCTGTGCCAGCTTAATGAACTTCACAACATCATAC
. : . : . : . : . : . :
JMSF021F22+ CTGTCCTCAAAATAATATTTCCCAGGTTGAGGCTCATGCCCATTCCAGAAAATATAAGTC
JMFS040F01+ CTGTCCTCAAAATAATATTTCCCAGGTTGAGGCTCATGCCCATTCCAGAAAATATAAGTC
JMFF018H13+ CTGTCCTCAAAATAATATTTCCCAGGTTGAGGCTCATGCCCATTCCAGAAAATATAAGTC
JMFS072F04+ CTGTCCTCAAAATAATATTTCCCAGGTTGAGGCTCATGCCCATTCCAGAAAATATAAGTC
JMFF033M24+ CTGTCCTCAAAATAATATTTCCCAGGTTGAGGCTCATGCCCATTCCAGAAAATATAAGTN
JMFS079H10+ CTGTCCTCAAAATAATATTTCCCAGGTTGAGGCTCATGCCCATTCCAGAAAATATAAGTC
JMFF048P10+ CTGTCCTCAAAATAATATTTCCCAGGTTGAGGCTCATGCCCATTCCAGAAAATATAAGTC
JMFF031F22+ CTGTCCTCAAAATAATATTTCCCAGGTTGAGGCTCATGCCCATTCCAGAAAATATAAGTC
____________________________________________________________
consensus CTGTCCTCAAAATAATATTTCCCAGGTTGAGGCTCATGCCCATTCCAGAAAATATAAGTC
. : . : . : . : . : . :
JMSF021F22+ TGGATCACATCCAATCCTCCTTCCTTAGCTTTCTGCAGAAGATCTGGCCACATCTCAGGT
JMFS040F01+ TGGATCACATCCAATCCTCCTTCCTTAGCTTTCTGCAGAAGATCTGGCCACATCTCAGGT
JMFF018H13+ TGGATCACATCCAATCCTCCTTCCTTAGCTTTCTGCAGAAGATCTGGCCACATCTCAGGT
JMFS072F04+ TGGATCACATCCAATCCTCCTTCCTTAGCTTTCTGCAGAAGATCTGGCCACATCTCAGGT
JMFF033M24+ TGGATCACATCCAATCCTCCTTCCTTAGCTTTCTGCAGAAGATCTGGCCACATCTCAGGT
JMFS079H10+ TGGATCACATCCAATCCTCCTTCCTTAGCTTTCTGCAGAAGATCTGGCCACATCTCAGGT
JMFF048P10+ TGGATCACATCCAATCCTCCTTCCTTAGCTTTCTGCAGAAGATCTGGCCACATCTCAGGT
JMFF031F22+ TGGATCACATCCAATCCTCCTTCCTTAGCTTTCTGCAGAAGATCTGGCCACATCTCAGGT
____________________________________________________________
consensus TGGATCACATCCAATCCTCCTTCCTTAGCTTTCTGCAGAAGATCTGGCCACATCTCAGGT
. : . : . : . : . : . :
JMSF021F22+ GTGCTTCTGGGGTAGTGAATGGATCCAGAAATAAGGATCTTTCTGTGGCCATTGATGATG
JMFS040F01+ GTGCTTCTGGGGTAGTGAATGGATCCAGAAATAAGGATCTTTCTGTGGCCATTGATGATG
JMFF018H13+ GTGCTTCTGGGGTAGTGAATGGATCCAGAAATAAGGATCTTTCTGTGGCCATTGATGATG
JMFS072F04+ GTGCTTCTGGGGTAGTGAATGGATCCAGAAATAAGGATCTTTCTGTGGCCATTGATGATG
JMFF033M24+ GTGCTTCTGGGGTAGTGAATGGATCCAGAAATAAGGATCTTTCTGTGGCCATTGATGATG
JMFS079H10+ GTGCTTCTGGGGTAGTGAATGGATCCAGAAATAAGGATCTTTCTGTGGCCATTGATGATG
JMFF048P10+ GTGCTTCTGGGGTAGTGAATGGATCCAGAAATAAGGATCTTTCTGTGGCCATTGATGATG
JMFF031F22+ GTGCTTCTGGGGTAGTGAATGGATCCAGAAATAAGGATCTTTCTGTGGCCATTGATGATG
____________________________________________________________
consensus GTGCTTCTGGGGTAGTGAATGGATCCAGAAATAAGGATCTTTCTGTGGCCATTGATGATG
. : . : . : . : . : . :
JMSF021F22+ AAAGCATTCTTATCATAGGATACTGAAGCATTTACAGAAGAAAACCAGGTGCCCAGTAAC
JMFS040F01+ AAAGCATTCTTATCATAGGATACTGAAGCATTTACAGAAGAAAACCAGGTGCCCAGTAAC
JMFF018H13+ AAAGCATTCTTATCATAGGATACTGAAGCATT
JMFS072F04+ AAAGCATTCTTATCATAGGATACTGAAGCATT
JMFF033M24+ AAAGCATTCTTATCATAGGATACTGAAGCATT
JMFS079H10+ AAAGCATTCTTATCATAGGATACTGAAGCATTTACAGAAGAAAACCAGGTGCCCAGTAAC
JMFF048P10+ AAAGCATTCTTATCATAGGATACTGAAGCATTTACAGAAGAAAACCAGGTGCCCAGTAAC
JMFF031F22+ AAAGCATTCTTATCATAGGATACTGAAGCATTTACAGAAGAAAACCAGGTGCCCAGTAAC
____________________________________________________________
consensus AAAGCATTCTTATCATAGGATACTGAAGCATTTACAGAAGAAAACCAGGTGCCCAGTAAC
. : . : . : . : . : . :
JMSF021F22+ ACCACCCCTACCACCAACACATTCCACATTACAAGGTTCAAACCCATTGCCCACCACCAC
JMFS040F01+ ACCACCCCTACCACCAACACATTCCACATTACAAGGTTCAAACCCATTGCCCACGACCAC
JMFS079H10+ ACCACCCCTACCACCAACACATTCCACATTACAAGGTTCAAACCCATTGCCCACCACCAC
JMFF048P10+ ACCACCCCTACCACCAACACATTCCACATTACAAGGTTCAAACCCATTGCCCACCACCAC
JMFF031F22+ ACCACCCCTACCACCAACACATTCCACATTACAAGGTTCAAACCCATTGCCCACCACCAC
____________________________________________________________
consensus ACCACCCCTACCACCAACACATTCCACATTACAAGGTTCAAACCCATTGCCCACCACCAC
. : . : . : . : . : . :
JMSF021F22+ CGTCCACGGCCAGTCCGCCACC
JMFS040F01+ CGTCCACGGCCA
JMFS079H10+ CGTCCACGGCCAGTCCGCCACCCACAAATTAAAGCGCCTTATTCTTTGG
JMFF048P10+ CGTCCACGGCCAGTCCGCCACCCACAAATTAAAGCGCCTTATTCTTTGGCGCTTTATTCT
JMFF031F22+ CGTCCACGGCCAGTCCGCCACCCACAAATTAAAGCGCCTTATTCTTTGGCGCTTTATTCT
____________________________________________________________
consensus CGTCCACGGCCAGTCCGCCACCCACAAATTAAAGCGCCTTATTCTTTGGCGCTTTATTCT