Contig 008809:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030N12Sequence562008809 (2)ref|XP_009625133.1|2e-19PREDICTED: transcription factor ICE1-like [Nicotiana tomentosiformis]728002003 (2)ref|XP_009769541.1|1e-89PREDICTED: transcription factor ICE1-like [Nicotiana sylvestris]
JMFS052E11Sequence461008809 (2)ref|XP_011073188.1|4e-13PREDICTED: transcription factor ICE1-like [Sesamum indicum]

Alignment

This contig is upended


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JMFF030N12+                                                 TCCAAGGGATGGGTCATGATGG
                      ____________________________________________________________
consensus                                                   TCCAAGGGATGGGTCATGATGG
 
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JMFF030N12+           TGGGCTTGTGGGGCAAAAAATAGTGAACCTGAGAAGGGTCAAGAGCATTGAACACTGAAG
                      ____________________________________________________________
consensus             TGGGCTTGTGGGGCAAAAAATAGTGAACCTGAGAAGGGTCAAGAGCATTGAACACTGAAG
 
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JMFS052E11+                     AGAGCAAGAGGAAGAGGAATCCACTGGGTTCAAGATCAGATTGTTGTCAG
JMFF030N12+           CAGAAGAGGGAGAGCAAGAGGAAGAGGAATCCACTGGGTTCAAGATCAGATTGTTGTCAG
                      ____________________________________________________________
consensus             CAGAAGAGGGAGAGCAAGAGGAAGAGGAATCCACTGGGTTCAAGATCAGATTGTTGTCAG
 
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JMFS052E11+           GCTCAGAGAAATTCGTAGAGAAAGAGATGCTCCCATGGCCTTGCATGGGTGCACCATTGT
JMFF030N12+           GCTCAGAGAAATTCGTAGAGAAAGAGATGCTCCCATGGCCTTGCATGGGTGCACCATTGT
                      ____________________________________________________________
consensus             GCTCAGAGAAATTCGTAGAGAAAGAGATGCTCCCATGGCCTTGCATGGGTGCACCATTGT
 
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JMFS052E11+           GGCTATGGTGATGGCTAGCCATGTACCACTCCACATCCTCAGCTTCCAGCATGGACTTGA
JMFF030N12+           GGCTATGGTGATGGCTAGCCATGTACCACTCCACATCCTCAGCTTCCAGCATGGACTTGA
                      ____________________________________________________________
consensus             GGCTATGGTGATGGCTAGCCATGTACCACTCCACATCCTCAGCTTCCAGCATGGACTTGA
 
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JMFS052E11+           TCGTTGCCATCTCCATTTCCTCTTTGCCCGCCAACCCTCCTCCGGCGCCACCGCTATGGT
JMFF030N12+           TCGTTGCCATCTCCATTTCCTCTTTGCCCGCCAACCCTCCTCCGGCGCCACCGCTATGGT
                      ____________________________________________________________
consensus             TCGTTGCCATCTCCATTTCCTCTTTGCCCGCCAACCCTCCTCCGGCGCCACCGCTATGGT
 
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JMFS052E11+           GGTGGTGGCCGCCGCCATTTGTGCAGCCGTTGTTGTTGTTCTGTGCCCAAGAACCCGTTT
JMFF030N12+           GGTGGTGGCCGCCGCCATTTGTGCAGCCGTTGTTGTTGTTCTGTGCCCAAGAACCCGTTT
                      ____________________________________________________________
consensus             GGTGGTGGCCGCCGCCATTTGTGCAGCCGTTGTTGTTGTTCTGTGCCCAAGAACCCGTTT
 
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JMFS052E11+           GTTCTTCCTCTTTCCCATCCATCCATACCATGCTTGTCACTCTTGATAACATTTCCTTTG
JMFF030N12+           GTTCTTCCTCTTTCCCATCCATCCATACCATGCTTGTCACTCTTGATAACATTTCCTTTN
                      ____________________________________________________________
consensus             GTTCTTCCTCTTTCCCATCCATCCATACCATGCTTGTCACTCTTGATAACATTTCCTTTG
 
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JMFS052E11+           TTCCCCAAGATTCTTTCTTTTCTCTCTGCAATGGCGAATTCAACGAGAAGAAGAGCAGAG
JMFF030N12+           TTCCCCAAGATTCTTTCTTTTCTCTCTGCAATGGCGAATTCAACGAGAAGAAGAGCAGAG
                      ____________________________________________________________
consensus             TTCCCCAAGATTCTTTCTTTTCTCTCTGCAATGGCGAATTCAACGAGAAGAAGAGCAGAG
 
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JMFS052E11+           TGGGGCTAGAGGGGTGCAGAAAGCAAGAGAGAAAGGGGTGGGGGTGCAAAG         
JMFF030N12+           TGGGGCTAGAGGGGTGCAGAAAGCAAGAGAGAAAGGGGTGGGGGTGCAAAGGCCAAAGAG
                      ____________________________________________________________
consensus             TGGGGCTAGAGGGGTGCAGAAAGCAAGAGAGAAAGGGGTGGGGGTGCAAAGGCCAAAGAG