clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF030A22 | Sequence | 544 | 008807 (3) | gb|ABK51386.1| | 6e-07 | apyrase-like protein [Nicotiana tabacum] | 745 | 001133 (4) | ref|XP_009618558.1| | 9e-69 | PREDICTED: apyrase 1-like [Nicotiana tomentosiformis] |
JMSF008C22 | Sequence | 369 | 008807 (3) | ref|XP_009770744.1| | 1e-07 | PREDICTED: apyrase 2-like [Nicotiana sylvestris] | 728 | 001133 (4) | ref|XP_011089773.1| | 7e-53 | PREDICTED: apyrase 2-like [Sesamum indicum] |
JMSF034B04 | Sequence | 668 | 008807 (3) | ref|XP_009622670.1| | 2e-69 | PREDICTED: apyrase 2-like [Nicotiana tomentosiformis] | 708 | 001133 (4) | ref|XP_009618558.1| | 2e-67 | PREDICTED: apyrase 1-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF034B04+ CAGAAAATCCCTCACCGCTTGCAGG
____________________________________________________________
consensus CAGAAAATCCCTCACCGCTTGCAGG
. : . : . : . : . : . :
JMSF034B04+ ATCTTATCAGGTGCATCACCTTCCAATTGCCTCAAACCTGCAGTGGCCCCAACTTTGACT
____________________________________________________________
consensus ATCTTATCAGGTGCATCACCTTCCAATTGCCTCAAACCTGCAGTGGCCCCAACTTTGACT
. : . : . : . : . : . :
JMSF034B04+ GGGGTGTAGGGGCGCATTTCAGCAGGAACTACACCCTCTGCCTTCTCAAGAAGTGATGCA
____________________________________________________________
consensus GGGGTGTAGGGGCGCATTTCAGCAGGAACTACACCCTCTGCCTTCTCAAGAAGTGATGCA
. : . : . : . : . : . :
JMSF034B04+ AGAGAATTTGCAGCAGCCTTAGGCTCCTTTGGGTAAGCACTCAAACCTGGTTTTAACTGC
____________________________________________________________
consensus AGAGAATTTGCAGCAGCCTTAGGCTCCTTTGGGTAAGCACTCAAACCTGGTTTTAACTGC
. : . : . : . : . : . :
JMSF034B04+ ACAAAAAGTTCGAGTTCATTGCCTATTTGAACCAGATCGAGGTTCTTATCGAAACAGAAG
____________________________________________________________
consensus ACAAAAAGTTCGAGTTCATTGCCTATTTGAACCAGATCGAGGTTCTTATCGAAACAGAAG
. : . : . : . : . : . :
JMSF034B04+ ACGTGGACCCTACTGCCTGAGCTTCCGGCGTCGAAGATGACGGCGTACCTCTTAGATCCG
JMSF008C22+ CG
JMFF030A22+ CG
____________________________________________________________
consensus ACGTGGACCCTACTGCCTGAGCTTCCGGCGTCGAAGATGACGGCGTACCTCTTAGATCCG
. : . : . : . : . : . :
JMSF034B04+ AAGTCGGGAGAGAATTTACGATTCAGCGACTCCATGGAATCAGCCGGGTATCGGGCGGGC
JMSF008C22+ AAGTCNGGAGAGAATTTACGATTCAGCGACTCCATGGAATCAGCCGGGTATCGGGCGGGC
JMFF030A22+ AAGTCGGGAGAGAATTTACGATTCAGCGACTCCATGGAATCAGCCGGTTATCGGGCGGGC
____________________________________________________________
consensus AAGTCGGGAGAGAATTTACGATTCAGCGACTCCATGGAATCAGCCGGGTATCGGGCGGGC
. : . : . : . : . : . :
JMSF034B04+ ATGACGAAGAGGACGAACGAAATGAGCAGCAGAGGCACAGAGATGATTAGGAGGACTCCC
JMSF008C22+ ATGACGAAGAGGACGAACGAAATGAGCAGCAGAGGCACAGAGATGATTAGGAGGACTCCC
JMFF030A22+ ATGACGAAGAGGACGAACGAAATGAGCAGCAGAGGCACAGAGATGATTAGGAGGACTCCC
____________________________________________________________
consensus ATGACGAAGAGGACGAACGAAATGAGCAGCAGAGGCACAGAGATGATTAGGAGGACTCCC
. : . : . : . : . : . :
JMSF034B04+ CGGTACCTCTGGATCACGTCGGACACGGAGTCGTGCTGGCCGCGGTTGCGCTTAAGTTGC
JMSF008C22+ CGGTACCTCTGGATCACGTCGGACACGGAGTCGTGCTGGCCGCGGTTGCGCTTAAGTTGC
JMFF030A22+ CGGTACCTCTGGATCACGTCGGACACGTAGTCGTGCTGGCCGCGGTTGCGCTTAAGTTGC
____________________________________________________________
consensus CGGTACCTCTGGATCACGTCGGACACGGAGTCGTGCTGGCCGCGGTTGCGCTTAAGTTGC
. : . : . : . : . : . :
JMSF034B04+ TTCTCCATTTGATCGGCCGGAGCCGGCGGCGGCGGCGCTGGGTGTTGTGCCTCCAAGAGC
JMSF008C22+ TTCTCCATTTGATCGGCCGGAGCCGGCGGCGGCGGCGCTGGGTGTTGTGCCTCCAAGAGC
JMFF030A22+ TTCTCCATTTGATCGGCCGGAGCCGGCGGCGGCGGCGCTGGGTGTTGTGCCTCCAAGAGC
____________________________________________________________
consensus TTCTCCATTTGATCGGCCGGAGCCGGCGGCGGCGGCGCTGGGTGTTGTGCCTCCAAGAGC
. : . : . : . : . : . :
JMSF034B04+ TCAGCGGCCGATGGCGATCGATATCGGATCTGACCGTTTCCCGGCGGCTTCAACGGCTGC
JMSF008C22+ TCAGCGGCCGATGGCGATCGATATCGGATCTGACCGTTTCCCGGCGGCTTCAACGGCTGC
JMFF030A22+ TCAGCGGCCGATGGCGATCGATATCGGATCTGACCGTTTCCCGGCGGCTTCAACGGCTGC
____________________________________________________________
consensus TCAGCGGCCGATGGCGATCGATATCGGATCTGACCGTTTCCCGGCGGCTTCAACGGCTGC
. : . : . : . : . : . :
JMSF034B04+ GCAGTCTCCTGTACCGTCTCCAGTGCTTCTGACTCTACTC
JMSF008C22+ GCAGTCTCCTGTACCGTCTCCAGTGCTTCTGACTCTACTCTCACACTCTATGTAATCCCC
JMFF030A22+ GCAGTCTCCTGTACCGTCTCCAGTGCTTCTGACTCTACTCTCACACTCTATGTAATCCCC
____________________________________________________________
consensus GCAGTCTCCTGTACCGTCTCCAGTGCTTCTGACTCTACTCTCACACTCTATGTAATCCCC
. : . : . : . : . : . :
JMSF008C22+ ACTGTC
JMFF030A22+ ACTGTCGGTCGATAGATTTGGCACCAGTCGATCAAATCAGATCTCAAGCCCGAATCGCAT
____________________________________________________________
consensus ACTGTCGGTCGATAGATTTGGCACCAGTCGATCAAATCAGATCTCAAGCCCGAATCGCAT
. : . : . : . : . : . :
JMFF030A22+ GCAACCCGACCCGCCAATGTCGACGTTCTTCGTTGTCGTTGAGTGTTCAAGCTTGCTTGC
____________________________________________________________
consensus GCAACCCGACCCGCCAATGTCGACGTTCTTCGTTGTCGTTGAGTGTTCAAGCTTGCTTGC
. : . : . : . : . : . :
JMFF030A22+ TTAATCCTCCTCCCCCGCGTCGTTAATAAACCATTTTCCCTTTCTTCTTTCTTAATTATT
____________________________________________________________
consensus TTAATCCTCCTCCCCCGCGTCGTTAATAAACCATTTTCCCTTTCTTCTTTCTTAATTATT