Contig 008802:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004L18Sequence624008802 (5)emb|CDP16085.1|5e-85unnamed protein product [Coffea canephora]754004039 (5)gb|EYU36436.1|2e-99hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata]
JMFF026M10Sequence554008802 (5)emb|CDP16085.1|1e-82unnamed protein product [Coffea canephora]669004039 (5)gb|EYU36436.1|6e-69hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata]
JMSF017J17Sequence499008802 (5)emb|CDP16085.1|3e-66unnamed protein product [Coffea canephora]806004039 (5)gb|EYU36436.1|3e-110hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata]
JMSF036B16Sequence603008802 (5)emb|CDP16085.1|1e-65unnamed protein product [Coffea canephora]736004039 (5)gb|EYU36436.1|4e-105hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata]
JMSF047K03Sequence627008802 (5)emb|CDP16085.1|8e-86unnamed protein product [Coffea canephora]743004039 (5)gb|EYU36436.1|4e-101hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFF004L18+                               TCACCATTATCCAATGCTTGCTTTGCTTTTTTAATAAAAT
JMSF047K03+                             CTTCACCATTATCCAATGCTTGCTTTGCTTTTTTAATAAAAT
JMSF036B16+                                                              TAATAAAAT
                      ____________________________________________________________
consensus                               CTTCACCATTATCCAATGCTTGCTTTGCTTTTTTAATAAAAT
 
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JMFF004L18+           TTTCAGCTTCCTGGTCAAAACCTTGCAGATGTAAATCTTCATGATTATCTTTGTGGTCAT
JMSF047K03+           TTTCAGCTTCCTGGTCAAAACCTTGCAGATGTAAATCTTCATGATTATCTTTGTGGTCAT
JMSF036B16+           TTTCAGCTTCCTGGTCAAAACCTTGCAGATGTAAATCTTCATGATTATCTTTGTGGTCAT
                      ____________________________________________________________
consensus             TTTCAGCTTCCTGGTCAAAACCTTGCAGATGTAAATCTTCATGATTATCTTTGTGGTCAT
 
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JMFF004L18+           CATGCTTATGATCCGAATGTTCCTTCTCCACCAGGTCTGACAAATATTCGGTGCCAACGA
JMSF047K03+           CATGCTTATGATCCGAATGTTCCTTCTCCACCAGGTCTGACAAATATTCGGTGCCAACGA
JMSF036B16+           CATGCTTATGATCCGAATGTTCCTTCTCCACCAGGTCTGACAAATATTCGGTGCCAACGA
JMSF017J17+                                              TCTGACAAATATTCGGTGCCAACGA
JMFF026M10+           CATGCTTATGATCCGAATGTTCCTTCTCCACCAGGTCTGACAAATATTCGGTGCCAACGA
                      ____________________________________________________________
consensus             CATGCTTATGATCCGAATGTTCCTTCTCCACCAGGTCTGACAAATATTCGGTGCCAACGA
 
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JMFF004L18+           TGTAGCCATCACGGCTCAAGCGAAGCTTCCATATGTTTGTATCAAGATCTACTTCATGCT
JMSF047K03+           TGTAGCCATCACGGCTCAAGCGAAGCTTCCATATGTTTGTATCAAGATCTACTTCATGCT
JMSF036B16+           TGTAGCCAT-ACGGCTCAAGCGAAGCTTCCATATGTTTGTATCAAGATCTACTTCATGCT
JMSF017J17+           TGTAGCCAT-ACGGCTCAAGCGAAGCTTCCATATGTTTGTATCAAGATCTACTTCATGCT
JMFF026M10+           TGTAGCCATCACGGCTCAAGCGAAGCTTCCATATGTTTGTATCAAGATCTACTTCATGCT
                      ____________________________________________________________
consensus             TGTAGCCATCACGGCTCAAGCGAAGCTTCCATATGTTTGTATCAAGATCTACTTCATGCT
 
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JMFF004L18+           TTCCTGACATGTCAATTGCGTCGACACTCAAAACATCACAAGGTAAAGACGGGAATGACA
JMSF047K03+           TTCCTGACATGTCAATTGCGTCGACACTCAAAACATCACAAGGTAAAGACGGGAATGACA
JMSF036B16+           TTCCTGACATGTCAATTGCGTCGACACTCAAAACATCACAAGGTAAAGACGGGAATGACA
JMSF017J17+           TTCCTGACATGTCAATTGCGTCGACACTCAAAACATCACAAGGTAAAGACGGGAATGACA
JMFF026M10+           TTCCTGACATGTCAATTGCGTCGACACTCAAAACATCACAAGGTAAAGACGGGAATGACA
                      ____________________________________________________________
consensus             TTCCTGACATGTCAATTGCGTCGACACTCAAAACATCACAAGGTAAAGACGGGAATGACA
 
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JMFF004L18+           TATTGATGTGTATGGGGAGTGTTTCCCCACGTTTCAAGTCAACAGCCATCTGATGGACTG
JMSF047K03+           TATTGATGTGTATGGGGAGTGTTTCCCCACGTTTCAAGTCAACAGCCATCTGATGGACTG
JMSF036B16+           TATTGATGTGTATGGGGAGTGTTTCCCCACGTTTCAAGTCAACAGCCATCTGATGGACTG
JMSF017J17+           TATTGATGTGTATGGGGAGTGTTTCCCCACGTTTCAAGTCAACAGCCATCTGATGGACTG
JMFF026M10+           TATTGATGTGTATGGGGAGTGTTTCCCCACGTTTCAAGTCAACAGCCATCTGATGGACTG
                      ____________________________________________________________
consensus             TATTGATGTGTATGGGGAGTGTTTCCCCACGTTTCAAGTCAACAGCCATCTGATGGACTG
 
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JMFF004L18+           TATTTGTAGTAAGATAATATCTTAGTTCATGCAAGAATAGTGTTGCCATGATGACTAGCC
JMSF047K03+           TATTTGTAGTAAGATAATATCTTAGTTCATGCAAGAATAGTGTTGCCATGATGACTAGCC
JMSF036B16+           TATTTGTAGTAAGATAATATCTTAGTTCATGCAAGAATAGTGTTGCCATGATGACTAGCC
JMSF017J17+           TATTTGTAGTAAGATAATATCTTAGTTCATGCAAGAATAGTGTTGCCATGATGACTAGCC
JMFF026M10+           TATTTGTAGTAAGATAATATCTTAGTTCATGCAAGAATAGTGTTGCCATGATGACTAGCC
                      ____________________________________________________________
consensus             TATTTGTAGTAAGATAATATCTTAGTTCATGCAAGAATAGTGTTGCCATGATGACTAGCC
 
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JMFF004L18+           CAACAATAGAAACGAGGGCGCCAGATTTGGTCTTCTGCAACAAGTGCTCCTCAGCGCGCG
JMSF047K03+           CAACAATAGAAACGAGGGCGCCAGATTTGGTCTTCTGCAACAAGTGCTCCTCAGCGCGCG
JMSF036B16+           CAACAATAGAAACGAGGGCGCCAGATTTGGTCTTCTGCAACAAGTGCTCCTCAGCGCGCG
JMSF017J17+           CAACAATAGAAACGAGGGCGCCAGATTTGGTCTTCTGCAACAAGTGCTCCTCAGCGCGCG
JMFF026M10+           CAACAATAGAAACGAGGGCGCCAGATTTGGTCTTCTGCAACAAGTGCTCCTCAGCGCGCG
                      ____________________________________________________________
consensus             CAACAATAGAAACGAGGGCGCCAGATTTGGTCTTCTGCAACAAGTGCTCCTCAGCGCGCG
 
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JMFF004L18+           GAAAAGCATCTATAGCTTTGATTGCTTGTTTCACTCCCATCTTTTTCTTCTTTTATTTAT
JMSF047K03+           GAAAAGCATCTATAGCTTTGATTGCTTGTTTCACTCCCATCTTTTTCTTCTTTTATTTAT
JMSF036B16+           GAAAAGCATCTATAGCTTTGATTGCTTGTTTCACTCCCATCTTTTTCTTCTTTTATTTAT
JMSF017J17+           GAAAAGCATCTATAGCTTTGATTGCTTGTTTCACTCCCATCTTTTTCTTCTTTTATTTAT
JMFF026M10+           GAAAAGCATCTATAGCTTTGATTGCTTGTTTCACTCCCATCTTTTTCTTCTTTTATTTAT
                      ____________________________________________________________
consensus             GAAAAGCATCTATAGCTTTGATTGCTTGTTTCACTCCCATCTTTTTCTTCTTTTATTTAT
 
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JMFF004L18+           TTCCTTAAACGAAGATTAAAAGAGAGAGGAACAAAAATTGAGAGATATCCTCCCCCTCTG
JMSF047K03+           TTCCTTAAACGAAGATTAAAAGAGAGAGGAACAAAAATTGAGAGATATCCTCCCCCTCTG
JMSF036B16+           TTCCTTAAACGAAGATTAAAAGAGAGAGGAACAAAAATTGAGAGATATCCTCCCCCTCTG
JMSF017J17+           TTCCTTAAACGAAGATTAAAAGAGAGAGGAACAAAAATTGAGAGATATCCTCCCCCTCTG
JMFF026M10+           TTCCTTAAACGAAGATTAAAAGAGAGAGGAACAAAAATTGAGAGATATCCTCCCCCTCTG
                      ____________________________________________________________
consensus             TTCCTTAAACGAAGATTAAAAGAGAGAGGAACAAAAATTGAGAGATATCCTCCCCCTCTG
 
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JMFF004L18+           ACTTCTTCGCCGTCCGTCTACCGAGCACGAACAGAAGCGACTAC                
JMSF047K03+           ACTTCTTCGCCGTCCGTCTACCGAGCACGAACAGAAGCGCCTAC                
JMSF036B16+           ACTTCTTCGCCGTCCGTCTACCGAGCACGAACAGAAGCGCCTACGAGGAACATC      
JMSF017J17+           ACTTCTTCGCCGTCCGTCTACCGAGCACGAACAGAAGCGCCTACGAGGAACATC      
JMFF026M10+           ACTTCTTCGCCGTCCGTCTACCGAGCACGAACAGAAGCGCCTACGAGGAACATCGAGTAT
                      ____________________________________________________________
consensus             ACTTCTTCGCCGTCCGTCTACCGAGCACGAACAGAAGCGCCTACGAGGAACATCGAGTAT