Contig 008801:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026L21Sequence487008801 (2)ref|XP_009625008.1|1e-11PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'759004038 (3)emb|CDP15283.1|6e-70unnamed protein product [Coffea canephora]
JMSF003O24Sequence271008801 (2)740004038 (3)ref|XP_009625008.1|7e-79PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF026L21+ CAACGGC
                      ____________________________________________________________
consensus CAACGGC
 
. : . : . : . : . : . :
JMFF026L21+ AGGACCTNGAATGTCCCCGGCGCCGGCGCCGGCGCCCCCACAGATGGAAGATGCAACGAC
                      ____________________________________________________________
consensus AGGACCTNGAATGTCCCCGGCGCCGGCGCCGGCGCCCCCACAGATGGAAGATGCAACGAC
 
. : . : . : . : . : . :
JMFF026L21+ GGTGTTGAATTTCCCAGCGAACTACCCCTTGAAGCATGATTCACCACCACAACGGACGCG
                      ____________________________________________________________
consensus GGTGTTGAATTTCCCAGCGAACTACCCCTTGAAGCATGATTCACCACCACAACGGACGCG
 
. : . : . : . : . : . :
JMSF003O24+ TTCTTGTGCCCTCTCTTCATA
JMFF026L21+ GAGACCGACCCAAAGTCTTCGGCGTCCGGTTTGGGCACCTTCTTGTGCCCTCTCTTCATA
                      ____________________________________________________________
consensus GAGACCGACCCAAAGTCTTCGGCGTCCGGTTTGGGCACCTTCTTGTGCCCTCTCTTCATA
 
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JMSF003O24+ ATTTTGTTCAACATCTTAACTCTAAACCTACCCCCCTAAACTATGTAAATTGCAGCGAAA
JMFF026L21+ ATTTTGTTCAACATCTTAACTCTAAACCTACCCCCCTAAACTATGTAAATTGCAGCGAAA
                      ____________________________________________________________
consensus ATTTTGTTCAACATCTTAACTCTAAACCTACCCCCCTAAACTATGTAAATTGCAGCGAAA
 
. : . : . : . : . : . :
JMSF003O24+ TTTCAAAGAAAAATTCAAGCTTTGTCAAACAAGCAGAGACTAACCCTTAACAGCAATACA
JMFF026L21+ TTTCAAAGAAAAATTCAAGCTTTGTCAAACAAGCAGAGACTAACCCTTAACAGCAATACA
                      ____________________________________________________________
consensus TTTCAAAGAAAAATTCAAGCTTTGTCAAACAAGCAGAGACTAACCCTTAACAGCAATACA
 
. : . : . : . : . : . :
JMSF003O24+ AATTAGTACAAATACGAGAGAAGAAGAAGAGAAACGTACTGAAACTATAACCGTGGACTG
JMFF026L21+ AATTAGTACAAATACGAGAGAAGAAGAAGAGAAACGTACTGAAACTATAACCGTGGACTG
                      ____________________________________________________________
consensus AATTAGTACAAATACGAGAGAAGAAGAAGAGAAACGTACTGAAACTATAACCGTGGACTG
 
. : . : . : . : . : . :
JMSF003O24+ CAGCGGCGAACCATGAGCGCCGGAAAAGGCAAGAGACGGCGGTCCGACGGAGCAAGTTTC
JMFF026L21+ CAGCGGCGAACCATGAGCGCCGGAAAAGGCAAGAGACGGCGGTCCGACGGAGCAAGTTTC
                      ____________________________________________________________
consensus CAGCGGCGAACCATGAGCGCCGGAAAAGGCAAGAGACGGCGGTCCGACGGAGCAAGTTTC
 
. : . : . : . : . : . :
JMSF003O24+ CCGTCGATC
JMFF026L21+ CCGTCGATCAAGTGAGAGATACGATTGCAGAATACATATATAAGTCAGATTTGTTTTGAC
                      ____________________________________________________________
consensus CCGTCGATCAAGTGAGAGATACGATTGCAGAATACATATATAAGTCAGATTTGTTTTGAC