Contig 008799:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026K06Sequence574008799 (2)emb|CDO97478.1|2e-18unnamed protein product [Coffea canephora]651015931emb|CDO97478.1|3e-21unnamed protein product [Coffea canephora]
JMFS056A01Sequence613008799 (2)gb|AAZ91738.1|7e-53leucine rich repeat protein 1 [Nicotiana tabacum]

Alignment

This contig is upended


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JMFS056A01+                                                          ACTAAATTAGTTA
                      ____________________________________________________________
consensus                                                            ACTAAATTAGTTA
 
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JMFS056A01+           AGTTCCCAAGCTCAGTAGGAACTCTTCCACTTATATTAGTGCTATATAGTTCCAAGTACT
                      ____________________________________________________________
consensus             AGTTCCCAAGCTCAGTAGGAACTCTTCCACTTATATTAGTGCTATATAGTTCCAAGTACT
 
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JMFS056A01+           GCAAATTTGGAAGCTGACCAAGCTGTGGAACCAGTTGACCCGTCAAATGTGCATTTCCCA
                      ____________________________________________________________
consensus             GCAAATTTGGAAGCTGACCAAGCTGTGGAACCAGTTGACCCGTCAAATGTGCATTTCCCA
 
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JMFS056A01+           GATCCACTCTAGTAACACTATTGTCACTGTTGCACGTAACATGAAACCATGTGCAGGGAT
JMFF026K06+                                              GTAACATGAAACCATGTGCAGGGAT
                      ____________________________________________________________
consensus             GATCCACTCTAGTAACACTATTGTCACTGTTGCACGTAACATGAAACCATGTGCAGGGAT
 
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JMFS056A01+           TAACAAGGGTTGGATCCCAACTCTGTAGAACATTGTTAGGATCCGCCAAATTGGTCTTCA
JMFF026K06+           TAACAAGGGTTGGATCCCAACTCTGTAGAACATTGTTAGGATCCGCCAAATTGGTCTTCA
                      ____________________________________________________________
consensus             TAACAAGGGTTGGATCCCAACTCTGTAGAACATTGTTAGGATCCGCCAAATTGGTCTTCA
 
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JMFS056A01+           AAGCATTCAATGCATCACCTTCAGAGTTACCAGAGACTAGTGACAATTGAAGAAACGGCA
JMFF026K06+           AAGCATTCAATGCATCACCTTCAGAGTTACCAGAGACTAGTGACAATTGAAGAAACGGCA
                      ____________________________________________________________
consensus             AAGCATTCAATGCATCACCTTCAGAGTTACCAGAGACTAGTGACAATTGAAGAAACGGCA
 
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JMFS056A01+           ACAAGAAGCATAGAAGAGCAGCAGAAGCAGAAACCCAGATCACGGGCACCCTCCGATCCA
JMFF026K06+           ACAAGAAGCATAGAAGAGCAGCAGAAGCAGAAACCCAGATCACGGGCACCCTCCGATCCA
                      ____________________________________________________________
consensus             ACAAGAAGCATAGAAGAGCAGCAGAAGCAGAAACCCAGATCACGGGCACCCTCCGATCCA
 
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JMFS056A01+           TGATTACCAACTTATTCTTCTTCATCACCACCGCCTAAAAGCTAAGACTTCCCTTCTTCA
JMFF026K06+           TGATTACCAACTTATTCTTCTTCATCACCACCGCCTAAAAGCTAAGACTTCCCTTCTTCA
                      ____________________________________________________________
consensus             TGATTACCAACTTATTCTTCTTCATCACCACCGCCTAAAAGCTAAGACTTCCCTTCTTCA
 
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JMFS056A01+           GCATCGTGCAGCTAGCTTTTCAGCTCAAAAGAAAAGAACAAAAAAAGTCAAAGCGCAACC
JMFF026K06+           GCATCGTGCAGCTAGCTTTTCAGCTCAAAAGAAAAGAACAAAAAAAGTCAAAGCGCAACC
                      ____________________________________________________________
consensus             GCATCGTGCAGCTAGCTTTTCAGCTCAAAAGAAAAGAACAAAAAAAGTCAAAGCGCAACC
 
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JMFS056A01+           GGAAGCCCTAATTTTGAAGGAGTAAAATCGAGAATCTGAGGAGTAAAACTGAAGCAAAAA
JMFF026K06+           GGAAGCCCTAATTTTGAAGGAGTAAAATCGAGAATCTGAGGAGTAAAACTGAAGCAAAAA
                      ____________________________________________________________
consensus             GGAAGCCCTAATTTTGAAGGAGTAAAATCGAGAATCTGAGGAGTAAAACTGAAGCAAAAA
 
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JMFS056A01+           GGGACAAAAGCGGTCTTGGCTCAGCAGCAAAAGAAGAAGAGCTCAGAAATGGAGATTTTG
JMFF026K06+           GGGACAAAAGCGGTCTTGGCTCAGCAGCAAAAGAAGAAGAGCTCAGAAATGGAGATTTTG
                      ____________________________________________________________
consensus             GGGACAAAAGCGGTCTTGGCTCAGCAGCAAAAGAAGAAGAGCTCAGAAATGGAGATTTTG
 
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JMFF026K06+           TTAGAAGATGAACTGAACTCCCTTTTTTCTTTCACTTTCCGGGAGAATTGAGGATTCCAA
                      ____________________________________________________________
consensus             TTAGAAGATGAACTGAACTCCCTTTTTTCTTTCACTTTCCGGGAGAATTGAGGATTCCAA
 
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JMFF026K06+           AAAGCAGAAAGAGAGAGAAAGAGAGGAGAGGTGATTTTGAAGAAAAATTAAACGGTCTAC
                      ____________________________________________________________
consensus             AAAGCAGAAAGAGAGAGAAAGAGAGGAGAGGTGATTTTGAAGAAAAATTAAACGGTCTAC