Contig 008798:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026I19Sequence571008798 (2)553008798 (2)ref|XP_010672818.1|50.8PREDICTED: uncharacterized protein LOC104889320 [Beta vulgaris subsp. vulgaris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF026I19- TATTTGTGCGCCAAAGCCCAAATAGT
                      ____________________________________________________________
consensus TATTTGTGCGCCAAAGCCCAAATAGT
 
. : . : . : . : . : . :
rJMFF026I19- TTCCTGCTACATGTAGTTGAGTAGATAGAAAATAATTGTTACGGTAGGATGCTAACAAAT
                      ____________________________________________________________
consensus TTCCTGCTACATGTAGTTGAGTAGATAGAAAATAATTGTTACGGTAGGATGCTAACAAAT
 
. : . : . : . : . : . :
rJMFF026I19- CGAATCAGTACCCAAGTTTAAATAAAACAACATTGATGTACTATCCAAAAACTAGTCAAA
                      ____________________________________________________________
consensus CGAATCAGTACCCAAGTTTAAATAAAACAACATTGATGTACTATCCAAAAACTAGTCAAA
 
. : . : . : . : . : . :
rJMFF026I19- ACCATAAAAACATAGTGTTGTAGTGTTCCGATTGTGCTAGGTAGCCTTGCCTGACCTTTC
                      ____________________________________________________________
consensus ACCATAAAAACATAGTGTTGTAGTGTTCCGATTGTGCTAGGTAGCCTTGCCTGACCTTTC
 
. : . : . : . : . : . :
rJMFF026I19- ACGGTCATACTGTGCAACGTGAGTAGATACTGATGGCTTGTGCTCATTTACATCCGACAT
                      ____________________________________________________________
consensus ACGGTCATACTGTGCAACGTGAGTAGATACTGATGGCTTGTGCTCATTTACATCCGACAT
 
. : . : . : . : . : . :
rJMFF026I19- AATAATGTTATGCATGAAACGCTTTTGAAGGTTTTGAAGTTGTTCTGTGTCCCCTTTTAT
                      ____________________________________________________________
consensus AATAATGTTATGCATGAAACGCTTTTGAAGGTTTTGAAGTTGTTCTGTGTCCCCTTTTAT
 
. : . : . : . : . : . :
rJMFF026I19- CAACCCACACTCCCATTCTACACAATCTTGTCCAGTGAATGACTCCATATGACGCATCGC
JMFF026I19+ GTCCAGTGAATGACTCCATATGACGCATCGC
                      ____________________________________________________________
consensus CAACCCACACTCCCATTCTACACAATCTTGTCCAGTGAATGACTCCATATGACGCATCGC
 
. : . : . : . : . : . :
rJMFF026I19- GTACACTCTGGAGTCATACTTGTTAGTTGTATCCCGCCATACTATTTGCATCTTCTTCGG
JMFF026I19+ GTACACTCTGGAGTCATACTTGTTAGTTGTATCCCGCCATACTATTTGCATCTTCTTCGG
                      ____________________________________________________________
consensus GTACACTCTGGAGTCATACTTGTTAGTTGTATCCCGCCATACTATTTGCATCTTCTTCGG
 
. : . : . : . : . : . :
rJMFF026I19- TTCCATGTTGCGGATCATAACTGCATGAATTGGCTGGTTGTTGATTTCAAGGAAAGAGGC
JMFF026I19+ TTCCATGTTGCGGATCATAACTGCATGAATTGGCTGGTTGTTGATTTCAAGGAAAGAGGC
                      ____________________________________________________________
consensus TTCCATGTTGCGGATCATAACTGCATGAATTGGCTGGTTGTTGATTTCAAGGAAAGAGGC
 
. : . : . : . : . : . :
rJMFF026I19- AAGCTAGTCAACCACGGTGAGCCCACCTCTGCGCCAACCGCCGCCTA
JMFF026I19+ AAGCTAGTCAACCACGGTGAGCCCACCTCTGCGCCAACCGCCGCCTAGAAGAAACCTGGG
                      ____________________________________________________________
consensus AAGCTAGTCAACCACGGTGAGCCCACCTCTGCGCCAACCGCCGCCTAGAAGAAACCTGGG
 
. : . : . : . : . : . :
JMFF026I19+ AAGCAACTCCGGCCGCCGCCACACCCAATGCATCACGAACCGCTCGTTGTGCCCACCGGT
                      ____________________________________________________________
consensus AAGCAACTCCGGCCGCCGCCACACCCAATGCATCACGAACCGCTCGTTGTGCCCACCGGT
 
. : . : . : . : . : . :
JMFF026I19+ GCACCGCTCGTCGCCTTGCGGAGACCCTAGAAGCTACCCTGTTCGCATCCCAGATTCCCA
                      ____________________________________________________________
consensus GCACCGCTCGTCGCCTTGCGGAGACCCTAGAAGCTACCCTGTTCGCATCCCAGATTCCCA
 
. : . : . : . : . : . :
JMFF026I19+ GTCAAATGCACCACCCGTCGTGGAGGGCGGCTGACGGCCACCAGCGCGGCGCTTGAAGGG
                      ____________________________________________________________
consensus GTCAAATGCACCACCCGTCGTGGAGGGCGGCTGACGGCCACCAGCGCGGCGCTTGAAGGG
 
. : . : . : . : . : . :
JMFF026I19+ CCTAGCCGCCGAGTGCACTCTGTGAGCACCGGCCGAGGATGGTATCGGCGGCGCGAATAG
                      ____________________________________________________________
consensus CCTAGCCGCCGAGTGCACTCTGTGAGCACCGGCCGAGGATGGTATCGGCGGCGCGAATAG
 
. : . : . : . : . : . :
JMFF026I19+ ATGGCCGGACGCACCCCTCTTCGATTGTAGACTGCCATTGGACCTAGCCATCCCTAATCG
                      ____________________________________________________________
consensus ATGGCCGGACGCACCCCTCTTCGATTGTAGACTGCCATTGGACCTAGCCATCCCTAATCG
 
. : . : . : . : . : . :
JMFF026I19+ CGCAACCCTCGGGAGAGAAAGCACTGAGAATACGGTGTACGCAAGAGAGAGAGAAGCGAC
                      ____________________________________________________________
consensus CGCAACCCTCGGGAGAGAAAGCACTGAGAATACGGTGTACGCAAGAGAGAGAGAAGCGAC