Contig 008791:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005J03Sequence497008791 (6)emb|CDP05851.1|1e-25unnamed protein product [Coffea canephora]713012639 (5)gb|EYU19163.1|1e-137hypothetical protein MIMGU_mgv1a002305mg [Erythranthe guttata]
JMFF012D04Sequence554008791 (6)emb|CDP05851.1|9e-38unnamed protein product [Coffea canephora]802012639 (5)ref|XP_011095264.1|2e-139PREDICTED: cyclic nucleotide-gated ion channel 4 [Sesamum indicum]
JMFF024G14Sequence504008791 (6)emb|CDP05851.1|4e-21unnamed protein product [Coffea canephora]
JMFS167E05Sequence588008791 (6)ref|XP_009765747.1|5e-66PREDICTED: cyclic nucleotide-gated ion channel 4-like isoform X1 [Nicotiana syl
JMSF026I12Sequence673008791 (6)emb|CDP05851.1|5e-51unnamed protein product [Coffea canephora]810012639 (5)ref|XP_011095264.1|2e-159PREDICTED: cyclic nucleotide-gated ion channel 4 [Sesamum indicum]
JMSF027D11Sequence666008791 (6)emb|CDP05851.1|3e-71unnamed protein product [Coffea canephora]770012639 (5)ref|XP_011095264.1|7e-161PREDICTED: cyclic nucleotide-gated ion channel 4 [Sesamum indicum]

Alignment

This contig is upended


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JMFS167E05+                                                            TCGGAAGGTAT
                      ____________________________________________________________
consensus                                                              TCGGAAGGTAT
 
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JMFS167E05+           TGGAAGAGGAAGACGATCAAGAACACCGTCATCACCGTCGCCGTCGACCCCTTCTCCAGT
                      ____________________________________________________________
consensus             TGGAAGAGGAAGACGATCAAGAACACCGTCATCACCGTCGCCGTCGACCCCTTCTCCAGT
 
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JMFS167E05+           AACGCCGGAGTCGTCACCCATAATACTATCTGGGGTAAAGGAAGGATGACGAAGAGTTCA
                      ____________________________________________________________
consensus             AACGCCGGAGTCGTCACCCATAATACTATCTGGGGTAAAGGAAGGATGACGAAGAGTTCA
 
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JMFS167E05+           AAGAGGAAACCCTTTTTAGCTTTAAGATATCGAGACGCGGCGGCGCGGCGGGTGACGAGG
                      ____________________________________________________________
consensus             AAGAGGAAACCCTTTTTAGCTTTAAGATATCGAGACGCGGCGGCGCGGCGGGTGACGAGG
 
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JMFS167E05+           TTGTCGTGTTGCCGTCTGGCATCGTCGTCGTCGCCGGCGGCGGCGAAAGCCTGCGTCCGC
                      ____________________________________________________________
consensus             TTGTCGTGTTGCCGTCTGGCATCGTCGTCGTCGCCGGCGGCGGCGAAAGCCTGCGTCCGC
 
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JMFS167E05+           CGCCGCGTGTCCGTCTTGAACTGCACCCACATGTTGCAGAGGTGCAAGGCGTCGGTCATG
JMSF027D11+                        TCTTGAACTGCAGCCACATGTTCCAGAGGTATAAGGCGTCGGTCATG
JMFF012D04+                             AACTGCAGCCACATGTTCCAGAGGTATAAGGCGTCGGTCATG
JMSF026I12+                        TCTTGAACTGCAGCCACATGTTCCAGAGGTATAAGGCGTCGGTCATG
                      ____________________________________________________________
consensus             CGCCGCGTGTCCGTCTTGAACTGCAGCCACATGTTCCAGAGGTATAAGGCGTCGGTCATG
 
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JMFS167E05+           CAGCGGAGGACGGTGGCGGTGGTGGCGAACCAGCCGTCGACGAAGAGGCACATGCAGTTG
JMSF027D11+           CAGCGGAGAACGGTGACGGTGGTGGCGAACCAGCCGTCGACGAAGAGGCACATGCAGTTG
JMFF012D04+           CAGCGGAGAACGGTGACGGTGGTGGCGAACCAGCCGTCGACGAAGAGGCACATGCAGTTG
JMFF005J03+                          ACGGTGGTGGCGAACCAGCCGTCGACGAAGAGGCACATGCAGTTG
JMSF026I12+           CAGCGGAGAACGGTGACGGTGGTGGCGAACCAGCCGTCGACGAAGAGGCACATGCAGTTG
JMFF024G14+                                               TCGACGAAGAGGCACATGCAGTTG
                      ____________________________________________________________
consensus             CAGCGGAGAACGGTGACGGTGGTGGCGAACCAGCCGTCGACGAAGAGGCACATGCAGTTG
 
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JMFS167E05+           TCGCTTATGGAGAGGGCGTAGAAGAACAGAGGGTCCACGAACAGCCCGGCGGCGCATACT
JMSF027D11+           TCGCTTATGGAGAGAGTGTAGAAGAAGAGCGGGTCGACGAATAGGCCGGTGGCGCACACT
JMFF012D04+           TCGCTTATGGAGAGAGTGTAGAAGAAGAGCGGGTCGACGAATAGGCCGGTGGCGCACACT
JMFF005J03+           TCGCTTATGGAGAGAGTGTAGAAGAAGAGCGGGTCGACGAATAGGCCGGTGGCGCACACT
JMSF026I12+           TCGCTTATGGAGAGAGTGTAGAAGAAGAGCGGGTCGACGAATAGGCCGGTGGCGCACACT
JMFF024G14+           TCGCTTATGGAGAGAGTGTAGAAGAAGAGCGGGTCGACGAATAGGCCGGTGGCGCACACT
                      ____________________________________________________________
consensus             TCGCTTATGGAGAGAGTGTAGAAGAAGAGCGGGTCGACGAATAGGCCGGTGGCGCACACT
 
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JMFS167E05+           AGCAGGAAAACCCGGTTCCATTCTTGAACCCA                            
JMSF027D11+           AGGAGGAACACCCGGTTCCATTCCTGAACCCATGCGGCTCTAGGGTCCAACACCTTGCCG
JMFF012D04+           AGGAGGAACACCCGGTTCCATTCCTGAACCCATGCGGCTNTAGGGTCCAACACCTTGCCG
JMFF005J03+           AGGAGGAACACCCGGTTCCATTCCTGAACCCATGCGGCTCTAGGGTCCAACACCTTGCCG
JMSF026I12+           AGGAGGAACACCCGGTTCCATTCCTGAACCCATGCGGCTCTAGGGTCCAACACCTTGCCG
JMFF024G14+           AGGAGGAACACCCGGTTCCATTCCTGAACCCATGCGGCTCTAGGGTCCAACACCTTGCCG
                      ____________________________________________________________
consensus             AGGAGGAACACCCGGTTCCATTCCTGAACCCATGCGGCTCTAGGGTCCAACACCTTGCCG
 
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JMSF027D11+           AAAACAGATCCCCCTCGGCGGCGGCCTCCGCAAGCGCCGCCGTAAATACTCCGGCAGTTG
JMFF012D04+           AAAACAGATCCCCCTCGGCGGCGGCCTCCGCAAGCGCCGCCGTAAATACTCCGGCAGTTG
JMFF005J03+           AAAACAGATCCCCCTCGGCGGCGGCCTCCGCAAGCGCCGCCGTAAATACTCCGGCAGTTG
JMSF026I12+           AAAACAGATCCCCCTCGGCGGCGGCCTCCGCAAGCGCCGCCGTAAATACTCCGGCAGTTG
JMFF024G14+           AAAACAGATCCCCCTCGGCGGCGGCCTCCGCAAGCGCCGCCGTAAATACTCCGGCAGTTG
                      ____________________________________________________________
consensus             AAAACAGATCCCCCTCGGCGGCGGCCTCCGCAAGCGCCGCCGTAAATACTCCGGCAGTTG
 
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JMSF027D11+           TATAAATTTTTCTCCTCTTGCTCATCGCCCCCGTCTTCGCTTTCTTCTTCTTCTTCTTCA
JMFF012D04+           TATAAATTTTTCTCCTCTTGCTCATCGCCCCCGTCTTCGCTTTCTTCTTCTTCTTCTTCA
JMFF005J03+           TATAAATTTTTCTCCTCTTGCTCATCGCCCCCGTCTTCGCTTTCTTCTTCTTCTTCTTCA
JMSF026I12+           TATAAATTTTTCTCCTCTTGCTCATCGCCCCCGTCTTCGCTTTCTTCTTCTTCTTCTTCA
JMFF024G14+           TATAAATTTTTCTCCTCTTGCTCATCGCCCCCGTCTTCGCTTTCTTCTTCTTCTTCTTCA
                      ____________________________________________________________
consensus             TATAAATTTTTCTCCTCTTGCTCATCGCCCCCGTCTTCGCTTTCTTCTTCTTCTTCTTCA
 
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JMSF027D11+           TCGTCGTCTTCCTCTTCTACACCATCGGTGTCGTAGAAATTATTGCTTCGTGAACGTTCA
JMFF012D04+           TCGTCGTCTTCCTCTTCTACACCATCGGTGTCGTAGAAATTATTGCTTCGTGAACGTTCA
JMFF005J03+           TCGTCGTCTTCCTCTTCTACACCATCGGTGTCGTAGAAATTATTGCTTCGTGAACGTTCA
JMSF026I12+           TCGTCGTCTTCCTCTTCTACACCATCGGTGTCGTAGAAATTATTGCTTCGTGAACGTTCA
JMFF024G14+           TCGTCGTCTTCCTCTTCTACACCATCGGTGTCGTAGAAATTATTGCTTCGTGAACGTTCA
                      ____________________________________________________________
consensus             TCGTCGTCTTCCTCTTCTACACCATCGGTGTCGTAGAAATTATTGCTTCGTGAACGTTCA
 
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JMSF027D11+           AATTCACTTGCCATTTTCACTAGTCTACGTTCTTCACAACTCTGATCTTTTCTGATCTTC
JMFF012D04+           AATTCACTTGCCATTTTCACTAGTCTACGTTCTTCACAACTCTGATCTTTTCTGATCTTC
JMFF005J03+           AATTCACTTGCCATTTTCACTAGTCTACGTTCTTCACAACTCCGATCTTTTCTGATCTTC
JMSF026I12+           AATTCACTTGCCATTTTCACTAGTCTACGTTCTTCACAACTCTGATCTTTTCTGATCTTC
JMFF024G14+           AATTCACTTGCCATTTTCACTAGTCTACGTTCTTCACAACTCTGATCTTTTCTGATCTTC
                      ____________________________________________________________
consensus             AATTCACTTGCCATTTTCACTAGTCTACGTTCTTCACAACTCTGATCTTTTCTGATCTTC
 
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JMSF027D11+           T                                                           
JMFF012D04+           TATTTTTTTTTCAATTTCGTTTTTTATATATATTTATTTTTGAGAGTGGGCAGAAGAGAG
JMFF005J03+           TATTTTTTTTTCAATTTCGTTTTTTATATATATTTATTTTTGAGAGTGGGCAGAAGAGAG
JMSF026I12+           TATTTTTTTTTCAATTTCGTTTTTTATATATATTTATTTTTGAGAGTGGGCAGAAGAGAG
JMFF024G14+           TATTTTTTTTTCAATTTCGTTTTTTATATATATTTATTTTTGAGAGTGGGCAGAAGAGAG
                      ____________________________________________________________
consensus             TATTTTTTTTTCAATTTCGTTTTTTATATATATTTATTTTTGAGAGTGGGCAGAAGAGAG
 
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JMFF012D04+           AGAGATGAAGTTTGCTAGAGATCGAGAATTGC                            
JMFF005J03+           AGAGATGAAGTTTGCTAGAGATCGAGAATTGC                            
JMSF026I12+           AGAGATGAAGTTTGCTAGAGATCGAGAATTGC                            
JMFF024G14+           AGAGATGAAGTTTGCTAGAGATCGAGAATTGCAGATTGGTTTCTCTTCATAAGAGAATAT
                      ____________________________________________________________
consensus             AGAGATGAAGTTTGCTAGAGATCGAGAATTGCAGATTGGTTTCTCTTCATAAGAGAATAT