| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017K07 | Sequence | 570 | 008790 (5) | ref|XP_011075789.1| | 1e-86 | PREDICTED: target of Myb protein 1 [Sesamum indicum] | 678 | 005420 (5) | ref|XP_002285602.1| | 3e-78 | PREDICTED: TOM1-like protein 2 [Vitis vinifera] ref|XP_010644084.1| PREDICTED: T |
| JMFF024F19 | Sequence | 433 | 008790 (5) | ref|XP_011084615.1| | 2e-46 | PREDICTED: TOM1-like protein 2 [Sesamum indicum] | 730 | 005420 (5) | ref|XP_002285602.1| | 3e-80 | PREDICTED: TOM1-like protein 2 [Vitis vinifera] ref|XP_010644084.1| PREDICTED: T |
| JMFF040D13 | Sequence | 494 | 008790 (5) | ref|XP_011075789.1| | 1e-84 | PREDICTED: target of Myb protein 1 [Sesamum indicum] | 605 | 005420 (5) | ref|XP_002285602.1| | 2e-73 | PREDICTED: TOM1-like protein 2 [Vitis vinifera] ref|XP_010644084.1| PREDICTED: T |
| JMSF019M06 | Sequence | 560 | 008790 (5) | ref|XP_011075789.1| | 2e-82 | PREDICTED: target of Myb protein 1 [Sesamum indicum] | 745 | 005420 (5) | emb|CDP04931.1| | 3e-85 | unnamed protein product [Coffea canephora] |
| JMSF023J22 | Sequence | 657 | 008790 (5) | ref|XP_011075789.1| | 4e-119 | PREDICTED: target of Myb protein 1 [Sesamum indicum] | 790 | 005420 (5) | emb|CDP04931.1| | 3e-91 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF023J22+ TATCACGACCAGGGAAGCGTACACCTCTTGATCTCAAACTCTNGTAAGTCTCTT
____________________________________________________________
consensus TATCACGACCAGGGAAGCGTACACCTCTTGATCTCAAACTCTNGTAAGTCTCTT
. : . : . : . : . : . :
JMSF023J22+ CATAAACAGGCAAATAGCGAAGCTCATTTGATGATTCACCCCAAGATTCAATCATCATGA
____________________________________________________________
consensus CATAAACAGGCAAATAGCGAAGCTCATTTGATGATTCACCCCAAGATTCAATCATCATGA
. : . : . : . : . : . :
JMSF023J22+ GAGCCTTGTTCCGATTGTTCACAACAGTTTGAGGATCATCAATCAACTTCACCATCTCAT
JMFF040D13+ ATCATCAATCAACTTCACCATCTCAT
JMFF017K07+ ACAACAGTTTGAGGATCATCAATCAACTTCACCATCTCAT
JMSF019M06+ ATCATCAATCAACTTCACCATCTCAT
____________________________________________________________
consensus GAGCCTTGTTCCGATTGTTCACAACAGTTTGAGGATCATCAATCAACTTCACCATCTCAT
. : . : . : . : . : . :
JMSF023J22+ CAAGCACCCTCTCAGCTGCAATTTCCGAGAATGCCTTCTCACAATTCTTTGCAATGGTTT
JMFF040D13+ CAAGCACCCTCTCAGCTGCAATTTCCGAGAATGCCTTCTCACAATTCTTTGCAATGGTTT
JMFF017K07+ CAAGCACCCTCTCAGCTGCAATTTCCGAGAATGCCTTCTCACAATTCTTTGCAATGGTTT
JMSF019M06+ CAAGCACCCTNTCAGCTGCAATTTCCGAGAATGCCTTCTCACAATTCTTTGCAATGGTTT
____________________________________________________________
consensus CAAGCACCCTCTCAGCTGCAATTTCCGAGAATGCCTTCTCACAATTCTTTGCAATGGTTT
. : . : . : . : . : . :
JMSF023J22+ CAAGCAACGCCAAGGCCAAGTATTGAATCCTGGGGCTCTTCAACTGGATCCGCTTCTTTA
JMFF040D13+ CAAGCAACGCCAAGGCCAAGTATTGAATCCTGGGGCTCTTCAACTGGATCCGCTTCTTTA
JMFF017K07+ CAAGCAACGCCAAGGCCAAGTATTGAATCCTGGGGCTCTTCAACTGGATCCGCTTCTTTA
JMSF019M06+ CAAGCAACGCCAAGGCCAAGTATTGAATCCTGGGGCTCTTCAACTGGATCCGCTTCTTTA
JMFF024F19+ GATCCGCTTCTTTA
____________________________________________________________
consensus CAAGCAACGCCAAGGCCAAGTATTGAATCCTGGGGCTCTTCAACTGGATCCGCTTCTTTA
. : . : . : . : . : . :
JMSF023J22+ TGCCCCGTATGAGTTCAACACTATTGACCCTATCATGATTT---ATGTCACAGAGTTCAA
JMFF040D13+ TGCCCCGTATGAGTTCAACACTATTGACCCTATCATGATTTATCATGTCACAGAGTTCAA
JMFF017K07+ TGCCCCGTATGAGTTCAACACTATTGACCCTATCATGATTTATCATGTCACAGAGTTCAA
JMSF019M06+ TGCCCCGTATGAGTTCAACACTATTGACCCTATCATGATTTATCATGTCACAGAGTTCAA
JMFF024F19+ TGCCCCGTATGAGTTCAACACTATTGACCCTATCATGATTTATCATGTCACAGAGTTCAA
____________________________________________________________
consensus TGCCCCGTATGAGTTCAACACTATTGACCCTATCATGATTTATCATGTCACAGAGTTCAA
. : . : . : . : . : . :
JMSF023J22+ GATTCGTTGCCCAATTGGGCTCATCCAAAGTCTCTGCCGTCGCCTCCTCAACAAGCTTAT
JMFF040D13+ GATTCGTTGCCCAATTGGGCTCATCCAAAGTCTCTGCCGTCGCCTCCTCAACAAGCTTAT
JMFF017K07+ GATTCGTTGCCCAATTGGGCTCATCCAAAGTCTCTGCCGTCGCCTCCTCAACAAGCTTAT
JMSF019M06+ GATTCGTTGCCCAATTGGGCTCATCCAAAGTCTCTGCCGTCGCCTCCTCAACAAGCTTAT
JMFF024F19+ GATTCGTTGCCCAATTGGGCTCATCCAAAGTCTCTGCCGTCGCCTCCTCAACAAGCTTAT
____________________________________________________________
consensus GATTCGTTGCCCAATTGGGCTCATCCAAAGTCTCTGCCGTCGCCTCCTCAACAAGCTTAT
. : . : . : . : . : . :
JMSF023J22+ CCGCCTGGTTAGGGCCTTGGAAAAACTCCTTCATCTTAAAGCTCATGGAGCTCATTCCAG
JMFF040D13+ CCGCCTGGTTAGGGCCTTGGAAAAACTCCTTCATCTTAAAGCTCATGGAGCTCATTCCAG
JMFF017K07+ CCGCCTGGTTAGGGCCTTGGAAAAACTCCTTCATCTTAAAGCTCATGGAGCTCATTCCAG
JMSF019M06+ CCGCCTGGTTAGGGCCTTGGAAAAACTCCTTCATCTTAAAGCTCATGGAGCTCATTCCAG
JMFF024F19+ CCGCCTGGTTAGGGCCTTGGAAAAACTCCTTCATCTTAAAGCTCATGGAGCTCATTCCAG
____________________________________________________________
consensus CCGCCTGGTTAGGGCCTTGGAAAAACTCCTTCATCTTAAAGCTCATGGAGCTCATTCCAG
. : . : . : . : . : . :
JMSF023J22+ CAGTAATTTTTTGCCCCACCTCTGACCCTCCGATCTTCAAGCGCTCTCCCAAAGAGCTGA
JMFF040D13+ CAGTAATTTTTTGCCCCACCTCTGACCCTCCGATCTTCAAGCGCTCTCCCAAAGAGCTGA
JMFF017K07+ CAGTAATTTTTTGCCCCACCTCTGACCCTCCGATCTTCAAGCGCTCTCCCAAAGAGCTGA
JMSF019M06+ CAGTAATTTTTTGCCCCACCTCTGACCCTCCGATCTTCAAGCGCTCTCCCAAAGAGCTGA
JMFF024F19+ CAGTAATTTTTTGCCCCACCTCTGACCCTCCGATCTTCAAGCGCTCTCCCAAA-AGCTGA
____________________________________________________________
consensus CAGTAATTTTTTGCCCCACCTCTGACCCTCCGATCTTCAAGCGCTCTCCCAAAGAGCTGA
. : . : . : . : . : . :
JMSF023J22+ CTTTATCCATCAAATTGTCGCTCATCTTTCACAAACCCTTTCCCAGCAGATCAAAAAAAC
JMFF040D13+ CTTTATCCATCAAATTGTCGCTCATCTTTCACAAACCC
JMFF017K07+ CTTTATCCATCAAATTGTCGCTCATCTTTCACAAACCCTTTCCCAGCAGATCAAAAAAAC
JMSF019M06+ CTTTATCCATCAAATTGTCGCTCATCTTTCACAAACCCTTTCCCAGCAGATCAAAAAAAC
JMFF024F19+ CTTTATCCATCAAATTGTCGCTCATCTTTCACAAACCCTTTCCCAGCAGATCAAAAAAAC
____________________________________________________________
consensus CTTTATCCATCAAATTGTCGCTCATCTTTCACAAACCCTTTCCCAGCAGATCAAAAAAAC
. : . : . : . : . : . :
JMSF023J22+ ACACCGTAGAAAGCAAGGCGAGAAATCGTTGAATAGAAGCGTTTCTGTAGTACGGTTTGT
JMFF017K07+ ACACCGTAGAAAGCAAGGCGAGAAATCGTTGAATAGAAGCGTTTCTGTAGTACGGTTTGT
JMSF019M06+ ACACCGTAGAAAGCAAGGCGAGAAATCGTTGAATAGAAGCGTTTCTGTAGTACGGTTTGT
JMFF024F19+ ACACCGTAGAAAGCAAGGCGAGAAATCGTTGAATAGAAGCGTTTCTGTAGTACGGTTTGT
____________________________________________________________
consensus ACACCGTAGAAAGCAAGGCGAGAAATCGTTGAATAGAAGCGTTTCTGTAGTACGGTTTGT
. : . : . : . : . : . :
JMSF023J22+ ATGGC
JMFF017K07+ ATGGCGATGACAACAGATACGACTTGACTGACTATTCGTATTTTTCTTCC
JMSF019M06+ ATGGCGATGACAACAGATACGACTTGACTGACTATTCGTATTTTTCTTCC
JMFF024F19+ ATGGCGATGACAACAGATACGACTTGACTGACTATTCGTATTTTTCTTCCGATGTTTCCC
____________________________________________________________
consensus ATGGCGATGACAACAGATACGACTTGACTGACTATTCGTATTTTTCTTCCGATGTTTCCC