Contig 008789:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014D14Sequence581008789 (3)ref|XP_009601634.1|2e-88PREDICTED: 3-ketoacyl-CoA synthase 19-like [Nicotiana tomentosiformis]599002591 (5)ref|XP_004234025.1|3e-57PREDICTED: 3-ketoacyl-CoA synthase 11-like [Solanum lycopersicum]
JMFF024A01Sequence351008789 (3)ref|XP_009601634.1|7e-26PREDICTED: 3-ketoacyl-CoA synthase 19-like [Nicotiana tomentosiformis]596002591 (5)ref|XP_004234025.1|3e-53PREDICTED: 3-ketoacyl-CoA synthase 11-like [Solanum lycopersicum]
JMSF027B18Sequence631008789 (3)ref|XP_009601634.1|7e-89PREDICTED: 3-ketoacyl-CoA synthase 19-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF014D14+                                     TCCGCCATGCAAGGATTGGGCGGCTGTCGCAAAA
JMSF027B18+                                   CTTCCGCCATGCAAGGATTGGGCGGCTGTCGCAAAA
                      ____________________________________________________________
consensus                                     CTTCCGCCATGCAAGGATTGGGCGGCTGTCGCAAAA
 
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JMFF014D14+           GGGCTTCTGGGAAATAAGTCTTCTCCCCCAGCCCAGACCTCTCCAGTATCCTCTTCTGAA
JMSF027B18+           GGGCTTCTGGGAAATAAGTCTTCTCCCCCAGCCCAGACCTCTCCAGTATCCTCTTCTGAA
                      ____________________________________________________________
consensus             GGGCTTCTGGGAAATAAGTCTTCTCCCCCAGCCCAGACCTCTCCAGTATCCTCTTCTGAA
 
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JMFF014D14+           ACCCCAGATTCTCCTCCGTAAAAATGTTGGCTTTCTTGGATCTATCCATGAAGATCTCCT
JMSF027B18+           ACCCCAGATTCTCCTCCGTAAAAATGTTGGCTTTCTTGGATCTATCCATGAAGATCTCCT
                      ____________________________________________________________
consensus             ACCCCAGATTCTCCTCCGTAAAAATGTTGGCTTTCTTGGATCTATCCATGAAGATCTCCT
 
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JMFF014D14+           TCGGGCACATAACCTCCGGTGGAGGCTTGTAACACGCGAAATCCACCAAGTAAACCTTTC
JMSF027B18+           TCGGGCACATAACCTCCGGTGGAGGCTTGTAACACGCGAAATCCACCAAGTAAACCTTTC
                      ____________________________________________________________
consensus             TCGGGCACATAACCTCCGGTGGAGGCTTGTAACACGCGAAATCCACCAAGTAAACCTTTC
 
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JMFF014D14+           TGGGCCGTGTCATGAAGTAGAGTGTTCCCAGGAAAACTAAAAGAGCAGAACAGAGGACCA
JMSF027B18+           TGGGCCGTGTCATGAAGTAGAGTGTTCCCAGGAAAACTAAAAGAGCAGAACAGAGGACCA
                      ____________________________________________________________
consensus             TGGGCCGTGTCATGAAGTAGAGTGTTCCCAGGAAAACTAAAAGAGCAGAACAGAGGACCA
 
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JMFF014D14+           CCGTGACGAGGTTGAACTTGAGTTGCTGCCATAATTGGACCAAATCGTCGACGGTGAGAG
JMSF027B18+           CCGTGACGAGGTTGAACTTGAGTTGCTGCCATAATTGGACCAAATCGTCGACGGTGAGAG
JMFF024A01+                    GGTTGAACTTGAGTTGCTGCCATAATTGGACCAAATCGTCGACGGTGAGAG
                      ____________________________________________________________
consensus             CCGTGACGAGGTTGAACTTGAGTTGCTGCCATAATTGGACCAAATCGTCGACGGTGAGAG
 
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JMFF014D14+           TGGTGAGGTGAGCCGAAACCGCCCCGAGCACCGGCACCAAGACCAAATACATGGCGTGGC
JMSF027B18+           TGGTGAGGTGAGCCGAAACCGCCCCGAGCACCGGCACCAAGACCAAATACATGGCGTGGC
JMFF024A01+           TGGTGAGGTGAGCCGAAACCGCCCCGAGCACCGGCACCAAGACCAAATACATGGCGTGGC
                      ____________________________________________________________
consensus             TGGTGAGGTGAGCCGAAACCGCCCCGAGCACCGGCACCAAGACCAAATACATGGCGTGGC
 
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JMFF014D14+           TAATCAAATAATGGTACCCAAGCTTCACATACTTGAGCCTCACTGAGAGGAGAAAGTTTG
JMSF027B18+           TAATCAAATAATGGTACCCAAGCTTCACATACTTGAGCCTCACTGAGAGGAGAAAGTTTG
JMFF024A01+           TAATCAAATAATGGTACCCAAGCTTCACATACTTGAGCCTCACTGAGAGGAGAAAGTTTG
                      ____________________________________________________________
consensus             TAATCAAATAATGGTACCCAAGCTTCACATACTTGAGCCTCACTGAGAGGAGAAAGTTTG
 
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JMFF014D14+           GGAGATTATTATGGCTGCTCCGCCTCTCCTCCACCGCAACTCTCCCGCCGGCGTTATCCC
JMSF027B18+           GGAGATTATTATGGCTGCTCCGCCTCTCCTCCACCGCAACTCTCCCGCCGGCGTTATCCC
JMFF024A01+           GGAGATTATTATGGCTGCTCCGCCTCTCCTCCACCGCAACTCTCCCGCCGGCGTTATCCC
                      ____________________________________________________________
consensus             GGAGATTATTATGGCTGCTCCGCCTCTCCTCCACCGCAACTCTCCCGCCGGCGTTATCCC
 
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JMFF014D14+           CCATGGCTTCAAGAAAATATCAAGAAAAGACAGTTTCTGGGTGGATTTCTGATTGATGGG
JMSF027B18+           CCATGGCTTCAAGAAAATATCAAGAAAAGACAGTTTCTGGGTGGATTTCTGATTGATGGG
JMFF024A01+           CCATGGCTTCAAGAAAATATCAAGAAAAGACAGTTTCTGGGTGGATTTCTGATTGATGGG
                      ____________________________________________________________
consensus             CCATGGCTTCAAGAAAATATCAAGAAAAGACAGTTTCTGGGTGGATTTCTGATTGATGGG
 
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JMFF014D14+           GAAAAAC                                                     
JMSF027B18+           GAAAAACAAAGAACCTATGTGAAACGAGAGAGATTAGAGAAAGCTAAGGAATGT      
JMFF024A01+           GAAAAACAAAGAACCTATGTGAAACGAGAGAGATTAGAGAAAGCTAAGGAATGTGTAGGT
                      ____________________________________________________________
consensus             GAAAAACAAAGAACCTATGTGAAACGAGAGAGATTAGAGAAAGCTAAGGAATGTGTAGGT