| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012D23 | Sequence | 601 | 008788 (9) | ref|XP_009801198.1| | 4e-37 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Nicotiana sylvestris] | 727 | 008788 (9) | ref|XP_009801198.1| | 2e-10 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Nicotiana sylvestris] |
| JMFF014E13 | Sequence | 729 | 008788 (9) | ref|XP_009801198.1| | 2e-10 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Nicotiana sylvestris] | |||||
| JMFF023P08 | Sequence | 554 | 008788 (9) | ref|XP_009801198.1| | 2e-37 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Nicotiana sylvestris] | 693 | 008788 (9) | ref|XP_009801198.1| | 9e-13 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Nicotiana sylvestris] |
| JMFN006G05 | Sequence | 451 | 008788 (9) | ||||||||
| JMFS025C02 | Sequence | 622 | 008788 (9) | ref|XP_009801198.1| | 4e-37 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Nicotiana sylvestris] | |||||
| JMSF031K20 | Sequence | 671 | 008788 (9) | ref|XP_009801198.1| | 8e-37 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Nicotiana sylvestris] | 687 | 008788 (9) | ref|XP_009601373.1| | 2e-11 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Nicotiana tomentosifor |
This contig is upended
. : . : . : . : . : . :
JMFN006G05+ AACACGAAAAGGGGAAGGGGAGTTTCATGGTTATAGGTGGGAATTAA
rJMFF014E13- AAGGGGAGTTTCATGGTTATAGGTGGGAATTAA
rJMFF012D23- AAGGGGAGTTTCATGGTTATAGGTGGGAATTAA
____________________________________________________________
consensus AACACGAAAAGGGGAAGGGGAGTTTCATGGTTATAGGTGGGAATTAA
. : . : . : . : . : . :
JMFN006G05+ AT-AAAAAAATACAGCCTTCCTTCTACTTGATCTCTAGATATACAACACAGAAGAAGTAA
rJMFF014E13- AT-AAAAAAATACAGCCTTCCTTCTACTTGATCTCTAGATATACAACACAGAAGAAGTAA
rJMFF012D23- ATAAAAAAAATACAGCCTTCCTTCTACTTGATCTCTAGATATACAACACAGAAGAAGTAA
rJMSF031K20- AGCCTTCCTTCTACTTGATCTCTAGATATACAACACAGAAGAAGTAA
rJMFF023P08- GCCTTCCTTCTACTTGATCTCTAGATATACAACACAGAAGAAGTAA
____________________________________________________________
consensus AT-AAAAAAATACAGCCTTCCTTCTACTTGATCTCTAGATATACAACACAGAAGAAGTAA
. : . : . : . : . : . :
JMFN006G05+ AACATGATCATCTAATACTAGTCTACTACTACTACCCCCAGAAACAGCCAAATATGCGCT
rJMFF014E13- AACATGATCATCTAATACTAGTCTACTACTACTACCCCCAGAAACAGCCAAATATGCGCT
rJMFF012D23- AACATGATCATCTAATACTAGTCTACTACTACTACCCCCAGAAACAGCCAAATATGCGCT
rJMSF031K20- AACATGATCATCTAATACTAGTCTACTACTACTACCCCCAGAAACAGCCAAATATGCGCT
rJMFF023P08- AACATGATCATCTAATACTAGTCTACTACTACTACCCCCAGAAACAGCCAAATATGCGCT
____________________________________________________________
consensus AACATGATCATCTAATACTAGTCTACTACTACTACCCCCAGAAACAGCCAAATATGCGCT
. : . : . : . : . : . :
JMFN006G05+ CAAAATGGGAATCCAATTCCAACTTATCCACCCAAGATCAACAAAGTAAAGAGAAGCACA
rJMFF014E13- CAAAATGGGAATCCAATTCCAACTTATCCACCCAAGATCAACAAAGTAAAGAGAAGCACA
rJMFF012D23- CAAAATGGGAATCCAATTCCAACTTATCCACCCAAGATCAACAAAGTAAAGAGAAGCACA
rJMSF031K20- CAAAATGGGAATCCAATTCCAACTTATCCACCCAAGATCAACAAAGTAAAGAGAAGCACA
rJMFF023P08- CAAAATGGGAATCCAATTCCAACTTATCCACCCAAGATCAACAAAGTAAAGAGAAGCACA
____________________________________________________________
consensus CAAAATGGGAATCCAATTCCAACTTATCCACCCAAGATCAACAAAGTAAAGAGAAGCACA
. : . : . : . : . : . :
JMFN006G05+ AGTGGGACTTAAAGTCCAGATGAATCCCCCCCACCCCTCACTTTTTCCCAGCAAGAATCA
rJMFF014E13- AGTGGGACTTAAAGTCCAGATGAATCCCCCCCACCCCTCACTTTTTCCCAGCAAGAATCA
rJMFF012D23- AGTGGGACTTAAAGTCCAGATGAATCCCCCCCACCCCTCACTTTTTCCCAGCAAGAATCA
rJMSF031K20- AGTGGGACTTAAAGTCCAGATGAATCCCCCCCACCCCTCACTTTTTCCCAGCAAGAATCA
rJMFF023P08- AGTGGGACTTAAAGTCCAGATGAATCCCCCCCACCCCTCACTTTTTCCCAGCAAGAATCA
____________________________________________________________
consensus AGTGGGACTTAAAGTCCAGATGAATCCCCCCCACCCCTCACTTTTTCCCAGCAAGAATCA
. : . : . : . : . : . :
JMFN006G05+ AACCCAACGTGCCACATTTTTCTCAGACTCTTAGAGGACGAACCAGGCTTAGAAATACAA
rJMFF014E13- AACCCAACGTGCCACATTTTTCTCAGACTCTTAGAGGACGAACCAGGCTTAGAAATACAA
rJMFF012D23- AACCCAACGTGCCACATTTTTCTCAGACTCTTAGAGGACGAACCAGGCTTAGAAATACAA
rJMSF031K20- AACCCAACGTGCCACATTTTTCTCAGACTCTTAGAGGACGAACCAGGCTTAGAAATACAA
rJMFF023P08- AACCCAACGTGCCACATTTTTCTCAGACTCTTAGAGGACGAACCAGGCTTAGAAATACAA
____________________________________________________________
consensus AACCCAACGTGCCACATTTTTCTCAGACTCTTAGAGGACGAACCAGGCTTAGAAATACAA
. : . : . : . : . : . :
JMFN006G05+ CTGCCAGCCCGACCAAGATTGCGCTTTTACTAGGAAACACAGCTGCACTGCCATCCGGGA
rJMFF014E13- CTGCCAGCCCGACCAAGATTGCGCTTTTACTAGGAAACACAGCTGCACTGCCATCCGGGA
rJMFF012D23- CTGCCAGCCCGACCAAGATTGCGCTTTTACTAGGAAACACAGCTGCACTGCCATCCGGGA
rJMSF031K20- CTGCCAGCCCGACCAAGATTGCGCTTTTACTAGGAAACACAGCTGCACTGCCATCCGGGA
rJMFF023P08- CTGCCAGCCCGACCAAGATTGCGCTTTTACTAGGAAACACAGCTGCACTGCCATCCGGGA
____________________________________________________________
consensus CTGCCAGCCCGACCAAGATTGCGCTTTTACTAGGAAACACAGCTGCACTGCCATCCGGGA
. : . : . : . : . : . :
JMFN006G05+ TTCCAGTCCCGGCTGTGGGAGGAAGCCCGAAAGTCGGAGTTGTCC
rJMFF014E13- TTCCAGTCCCGGCTGTGGGAGGAAGCCCGAAAGTCGGAGTTGTCCCGGTGCCAATGCCTG
rJMFF012D23- TTCCAGTCCCGGCTGTGGGAGGAAGCCCGAAAGTCGGAGTTGTCCCGGTGCCAATGCCTG
rJMSF031K20- TTCCAGTCCCGGCTGTGGGAGGAAGCCCGAAAGTCGGAGTTGTCCCGGTGCCAATGCCTG
rJMFF023P08- TTCCAGTCCCGGCTGTGGGAGGAAGCCCGAAAGTCGGAGTTGTCCCGGTGCCAATGCCTG
JMFS025C02+ GGAGGAAGCCCGAAAGTCGGAGTTGTCCCGGTGCCAATGCCTG
JMFF012D23+ TTGTCCCGGTGCCAATGCCTG
JMSF031K20+ GTGCCAATGCCTG
____________________________________________________________
consensus TTCCAGTCCCGGCTGTGGGAGGAAGCCCGAAAGTCGGAGTTGTCCCGGTGCCAATGCCTG
. : . : . : . : . : . :
rJMFF014E13- TCCCCGTTCCAGTTCCAGTTCCGGTGCCTGTTCCAGTGCCCGTGCCAGTACCAATCCCAG
rJMFF012D23- TCCCCGTTCCAGTTCCAGTTCCGGTGCCTGTTCCAGTGCCCGTGCCAGTACCAATCCCAG
rJMSF031K20- TCCCCGTTCCAGTTCCAGTTCCGGTGCCTGTTCCAGTGCCCGTGCCAGTACCAATCCCAG
rJMFF023P08- TCCCCGTTCCAGTTCCAGTTCCGGTGCCTGTTCCAGTGCCCGTGCCAGTACCAATCCCAG
JMFS025C02+ TCCCCGTTCCAGTTCCAGTTCCGGTGCCTGTTCCAGTGCCCGTGCCAGTACCAATCCCAG
JMFF012D23+ TCCCCGTTCCAGTTCCAGTTCCGGTGCCTGTTCCAGTGCCCGTGCCAGTACCAATCCCAG
JMSF031K20+ TCCCCGTTCCAGTTCCAGTTCCGGTGCCTGTTCCAGTGCCCGTGCCAGTACCAATCCCAG
____________________________________________________________
consensus TCCCCGTTCCAGTTCCAGTTCCGGTGCCTGTTCCAGTGCCCGTGCCAGTACCAATCCCAG
. : . : . : . : . : . :
rJMFF014E13- TCCCGGTAGATGGGGTTGTCGGTGGGGTTAATGGGTTGGTGGTTGGCGATGTGCTTCCAC
rJMFF012D23- TCCCGGTAGATGGGGTTGTCGGTGGGGTTAATGGGTTGGTGGTTGGCGATGTGCTTCCAC
rJMSF031K20- TCCCGGTAGATGGGGTTGTCGGTGGGGTTAATGGGTTGGTGGTTGGCGATGTGCTTCCAC
rJMFF023P08- TCCCGGTAGATGGGGTTGTCGGTGGGGTTAATGGGTTGGTGGTTGGCGATGTGCTTCCAC
JMFS025C02+ TCCCGGTAGATGGGGTTGTCGGTGGGGTTAATGGGTTGGTGGTTGGCGATGTGCTTCCAC
JMFF012D23+ TCCCGGTAGATGGGGTTGTCGGTGGGGTTAATGGGTTGGTGGTTGGCGATGTGCTTCCAC
JMSF031K20+ TCCCGGTAGATGGGGTTGTCGGTGGGGTTAATGGGTTGGTGGTTGGCGATGTGCTTCCAC
JMFF023P08+ CGATGTGCTTCCAC
____________________________________________________________
consensus TCCCGGTAGATGGGGTTGTCGGTGGGGTTAATGGGTTGGTGGTTGGCGATGTGCTTCCAC
. : . : . : . : . : . :
rJMFF014E13- CGGCAGACCCAGCGCTTGAGGGATAAACACAAGATCCAGAAGGTTGAGAAGGTAGATTAG
rJMFF012D23- CGGCAGACCCAGCGCTTGAGGGATAAACACAAGATCCAGAAGGTTGAGAAGGTAGATTAG
rJMSF031K20- CGGCAGACCCAGCGCTTGAGGGATAAACACAAGATCCAGAAGGTTGAGAAGGTAGATTAG
rJMFF023P08- CGGCAGACCCAGCGCTTGAGGGATAAACACAAGATCCAGAAGGTTGAGAAGGTAGATTAG
JMFS025C02+ CGGCAGACCCAGCGCTTGAGGGATAAACACAAGATCCAGAAGGTTGAGAAGGTAGATTAG
JMFF012D23+ CGGCAGACCCAGCGCTTGAGGGATAAACACAAGATCCAGAAGGTTGAGAAGGTAGATTAG
JMSF031K20+ CGGCAGACCCAGCGCTTGAGGGATAAACACAAGATCCAGAAGGTTGAGAAGGTAGATTAG
JMFF023P08+ CGGCAGACCCAGCGCTTGAGGGATAAACACAAGATCCAGAAGGTTGAGAAGGTAGATTAG
____________________________________________________________
consensus CGGCAGACCCAGCGCTTGAGGGATAAACACAAGATCCAGAAGGTTGAGAAGGTAGATTAG
. : . : . : . : . : . :
rJMFF014E13- CAGTGAGAGTTGCAGTGCCAGAAAATTCACAGCTTGCTCCAGATGAAACCTTCTTCTGAT
rJMFF012D23- CAGTGAGAGTTGCAGTGCCAGAAAATTCACAGCTTGCTCCAGATGAAACCTTCTTCTGAT
rJMSF031K20- CAGTGAGAGTTGCAGTGCCAGAAAATTCACAGCTTGCTCCAGATGAAACCTTCTTCTGAT
rJMFF023P08- CAGTGAGAGTTGCAGTGCCAGAAAATTCACAGCTTGCTCCAGATGAAACCTTCTTCTGAT
JMFS025C02+ CAGTGAGAGTTGCAGTGCCAGAAAATTCACAGCTTGCTCCAGATGAAACCTTCTTCTGAT
JMFF012D23+ CAGTGAGAGTTGCAGTGCCAGAAAATTCACAGCTTGCTCCAGATGAAACCTTCTTCTGAT
JMSF031K20+ CAGTGAGAGTTGCAGTGCCAGAAAATTCACAGCTTGCTCCAGATGAAACCTTCTTCTGAT
JMFF023P08+ CAGTGAGAGTTGCAGTGCCAGAAAATTCACAGCTTGCTCCAGATGAAACCTTCTTCTGAT
____________________________________________________________
consensus CAGTGAGAGTTGCAGTGCCAGAAAATTCACAGCTTGCTCCAGATGAAACCTTCTTCTGAT
. : . : . : . : . : . :
rJMFF014E13- AATAGCTATTGACAGCATAGCTGCAGTGATCTTT
rJMFF012D23- AATAGCTATTGACAGCATAGCTGCAGTGATCTTT
rJMSF031K20- AATAGCTATTGACAGCATAGCTGCAGTGATCTTTCACAGT
rJMFF023P08- AATAGCTATTGACAGCATAGCTGCAGTGATCTTTCACAGTGTTGGGG
JMFS025C02+ AATAGCTATTGACAGCATAGCTGCAGTGATCTTTCACAGTGTTGGGGTTAAAACAAACAC
JMFF012D23+ AATAGCTATTGACAGCATAGCTGCAGTGATCTTTCACAGTGTTGGGGTTAAAACAAACAC
JMSF031K20+ AATAGCTATTGACAGCATAGCTGCAGTGATCTTTCACAGTGTTGGGGTTAAAACAAACAC
JMFF023P08+ AATAGCTATTGACAGCATAGCTGCAGTGATCTTTCACAGTGTTGGGGTTAAAACAAACAC
____________________________________________________________
consensus AATAGCTATTGACAGCATAGCTGCAGTGATCTTTCACAGTGTTGGGGTTAAAACAAACAC
. : . : . : . : . : . :
JMFS025C02+ CATTTTGAAGGATAGCAGAACAATCAGCTCCATTTCCACAAGCAAAATCTATGTTCCTCT
JMFF012D23+ CATTTTGAAGGATAGCAGAACAATCAGCTCCATTTCCACAAGCAAAATCTATGTTCCTCT
JMSF031K20+ CATTTTGAAGGATAGCAGAACAATCAGCTCCATTTCCACAAGCAAAATCTATGTTCCTCT
JMFF023P08+ CATTTTGAAGGATAGCAGAACAATCAGCTCCATTTCCACAAGCAAAATCTATGTTCCTCT
____________________________________________________________
consensus CATTTTGAAGGATAGCAGAACAATCAGCTCCATTTCCACAAGCAAAATCTATGTTCCTCT
. : . : . : . : . : . :
JMFS025C02+ GAAGCTGAGTATCACTCACCCCATCTTTGCACACACAGTAAGCAGCACTTGAATGACCAA
JMFF012D23+ GAAGCTGAGTATCACTCACCCCATCTTTGCACACACAGTAAGCAGCACTTGAATGACCAA
JMSF031K20+ GAAGCTGAGTATCACTCACCCCATCTTTGCACACACAGTAAGCAGCACTTGAATGACCAA
JMFF023P08+ GAAGCTGAGTATCACTCACCCCATCTTTGCACACACAGTAAGCAGCACTTGAATGACCAA
____________________________________________________________
consensus GAAGCTGAGTATCACTCACCCCATCTTTGCACACACAGTAAGCAGCACTTGAATGACCAA
. : . : . : . : . : . :
JMFS025C02+ CCAAGGCCATGAAAAGTAGTGAAAGGAGCACAAGAACCGCCATGATTCCTCAAGATCTTT
JMFF012D23+ CCAAGGCCATGAAAAGTAGTGAAAGGAGCACAAGAACCGCCATGATTCCTCAAGATCTTT
JMSF031K20+ CCAAGGCCATGAAAAGTAGTGAAAGGAGCACAAGAACCGCCATGATTCCTCAAGATCTTT
JMFF023P08+ CCAAGGCCATGAAGAGTAGTGAAAGGAGCACAAGAACCGCCATGATTCCTCAAGATCTTT
____________________________________________________________
consensus CCAAGGCCATGAAAAGTAGTGAAAGGAGCACAAGAACCGCCATGATTCCTCAAGATCTTT
. : . : . : . : . : . :
JMFS025C02+ CAGCTGGGATTTTGGGTATTACAGAACTGATAGGATGGTTCCTGTAGCAAGATTAGTTAG
JMFF012D23+ CAGCTGGGATTTTGGGTATTACAGAACTGATAGGATGGTTCCTGTAGCAAGATTAGTTAG
JMSF031K20+ CAGCTGGGATTTTAGGTATTACAGAACTGATAGGATGGTTCCTGTAGCAAGATTAGTTAG
JMFF023P08+ CAGCTGGGATTTTGGGTATTACAGAACTGATAGGATGGTTCCTGTAGCAAGATTAGTTAG
____________________________________________________________
consensus CAGCTGGGATTTTGGGTATTACAGAACTGATAGGATGGTTCCTGTAGCAAGATTAGTTAG
. : . : . : . : . : . :
JMFS025C02+ AGAGAGAAAGAAGTGGGTATCT
JMFF012D23+ AGAGAGAAAGAAGTGGGTATCTTAGGGAATGGAGAATTCT
JMSF031K20+ AGAGAGAAAGAAGTGGGTATCTTAGGGAATGGAGAATTCTGGAGAGAAAGAAGATTGAGA
JMFF023P08+ AGAGAGAAAGAAGTGGGTATCTTAGGGAATGGAGAATTCTGGAGAGAAAGAAGATTGAGA
____________________________________________________________
consensus AGAGAGAAAGAAGTGGGTATCTTAGGGAATGGAGAATTCTGGAGAGAAAGAAGATTGAGA
. : . : . : . : . : . :
JMSF031K20+ GCGATGGTGTAGGGTTATAGGGTGAGGGTCGTAGTACAGTAACTGACTAGGTGTATT
JMFF023P08+ GCGATGGTGTAGGGTTATAGGGTGAGGGTCGTAGTACAGTAACTGACTAGGTGTATTTTT
____________________________________________________________
consensus GCGATGGTGTAGGGTTATAGGGTGAGGGTCGTAGTACAGTAACTGACTAGGTGTATTTTT