| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008H18 | Sequence | 592 | 008785 (7) | ref|XP_009609674.1| | 2e-42 | PREDICTED: dicarboxylate transporter 1, chloroplastic [Nicotiana tomentosiformi | 757 | 002843 (7) | ref|XP_004142115.1| | 3e-94 | PREDICTED: dicarboxylate transporter 1, chloroplastic-like [Cucumis sativus] gb |
| JMFF014K14 | Sequence | 592 | 008785 (7) | ref|XP_004250945.1| | 7e-48 | PREDICTED: dicarboxylate transporter 1, chloroplastic [Solanum lycopersicum] | 668 | 002843 (7) | ref|XP_009777235.1| | 7e-90 | PREDICTED: dicarboxylate transporter 1, chloroplastic [Nicotiana sylvestris] |
| JMFF022M02 | Sequence | 491 | 008785 (7) | ref|XP_010102341.1| | 9e-23 | 2-oxoglutarate/malate translocator [Morus notabilis] gb|EXB93302.1| 2-oxoglutara | 544 | 002843 (7) | ref|XP_006850217.1| | 3e-57 | hypothetical protein AMTR_s00022p00253280 [Amborella trichopoda] gb|ERN11798.1| |
| JMFF033C03 | Sequence | 297 | 008785 (7) | 606 | 002843 (7) | ref|XP_009777235.1| | 9e-90 | PREDICTED: dicarboxylate transporter 1, chloroplastic [Nicotiana sylvestris] | |||
| JMFF037J19 | Sequence | 534 | 008785 (7) | ref|XP_010102341.1| | 3e-30 | 2-oxoglutarate/malate translocator [Morus notabilis] gb|EXB93302.1| 2-oxoglutara | 733 | 002843 (7) | ref|XP_004162089.1| | 2e-90 | PREDICTED: dicarboxylate transporter 1, chloroplastic-like [Cucumis sativus] |
| JMFF047N03 | Sequence | 614 | 008785 (7) | ref|XP_004250945.1| | 3e-53 | PREDICTED: dicarboxylate transporter 1, chloroplastic [Solanum lycopersicum] | 602 | 002843 (7) | ref|XP_009777235.1| | 5e-71 | PREDICTED: dicarboxylate transporter 1, chloroplastic [Nicotiana sylvestris] |
| JMSF020J10 | Sequence | 688 | 008785 (7) | ref|XP_004250945.1| | 4e-64 | PREDICTED: dicarboxylate transporter 1, chloroplastic [Solanum lycopersicum] | 757 | 002843 (7) | ref|XP_004162089.1| | 8e-90 | PREDICTED: dicarboxylate transporter 1, chloroplastic-like [Cucumis sativus] |
This contig is upended
. : . : . : . : . : . :
JMSF020J10+ AATCGCCG
____________________________________________________________
consensus AATCGCCG
. : . : . : . : . : . :
JMSF020J10+ GCGCTAACAGAGCCTCGCTGAATACCAAACTGTAGCCGAGCCCCAGGGAGGAGCTGCCGA
____________________________________________________________
consensus GCGCTAACAGAGCCTCGCTGAATACCAAACTGTAGCCGAGCCCCAGGGAGGAGCTGCCGA
. : . : . : . : . : . :
JMSF020J10+ AGAGCGAGACGAACTGGTAGGCGATTCTGTTGCCCAGCCCGGTCTTGATAAACCCCCGGG
JMFF047N03+ G
____________________________________________________________
consensus AGAGCGAGACGAACTGGTAGGCGATTCTGTTGCCCAGCCCGGTCTTGATAAACCCCCGGG
. : . : . : . : . : . :
JMSF020J10+ CGAAGAAGAACGCGAGCGCGATTAGCCAGGGGATGGGGTCGCCGAACGCGGAAAACGCGG
JMFF014K14+ GAACGCGAGCGCGATTAGCCAGGGGATGGGGTCGCCGAACGCGGAAAACGCGG
JMFF047N03+ CGAAGAAGAACGCGAGCGCGATTAGCCAGGGGATGGGGTCGCCGAACGCGGAAAACGCGG
JMFF008H18+ GAACGCGAGCGCGATTAGCCAGGGGATGGGGTCGCCGAACGCGGAAAACGCGG
____________________________________________________________
consensus CGAAGAAGAACGCGAGCGCGATTAGCCAGGGGATGGGGTCGCCGAACGCGGAAAACGCGG
. : . : . : . : . : . :
JMSF020J10+ CGGCGAACGTGAGAGTTTTTGTCAGCACGCACGCGCCGAGGCCCATCAACGCGACGGCGC
JMFF014K14+ CGGCGAACGTGAGAGTTTTTGTCAGCACGCACGCGCCGAGGCCCATCAACGCGACGGCGC
JMFF047N03+ CGGCGAACGTGAGAGTTTTTGTCAGCACGCACGCGCCGAGGCCCATCAACGCGACGGCGC
JMFF037J19+ AACGTGAGAGTTTTTGTCAGCACGCACGCGCCGAGGCCCATCAACGCGACGGCGC
JMFF008H18+ CGGCGAACGTGAGAGTTTTTGTCAGCACGCACGCGCCGAGGCCCATCAACGCGACGGCGC
JMFF022M02+ ACGCGACGGCGC
____________________________________________________________
consensus CGGCGAACGTGAGAGTTTTTGTCAGCACGCACGCGCCGAGGCCCATCAACGCGACGGCGC
. : . : . : . : . : . :
JMSF020J10+ CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
JMFF014K14+ CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
JMFF047N03+ CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
JMFF037J19+ CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
JMFF008H18+ CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
JMFF022M02+ CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
____________________________________________________________
consensus CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
. : . : . : . : . : . :
JMSF020J10+ GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
JMFF014K14+ GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
JMFF047N03+ GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
JMFF037J19+ GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
JMFF008H18+ GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
JMFF022M02+ GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
____________________________________________________________
consensus GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
. : . : . : . : . : . :
JMSF020J10+ CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
JMFF033C03+ GGCGCGGCGC
JMFF014K14+ CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
JMFF047N03+ CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
JMFF037J19+ CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
JMFF008H18+ CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
JMFF022M02+ CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
____________________________________________________________
consensus CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
. : . : . : . : . : . :
JMSF020J10+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
JMFF033C03+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
JMFF014K14+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
JMFF047N03+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
JMFF037J19+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
JMFF008H18+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
JMFF022M02+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
____________________________________________________________
consensus CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
. : . : . : . : . : . :
JMSF020J10+ GCTTCACATTGTTTCTTTCATGGTTCTTGAGCCCGGGAGTAATAAGGAGCTCGGTTTTCG
JMFF033C03+ GCTTCACATTGTTTCTTTCATGGTTCTTGAGCCCGGGAGTAATAAGGAGCTCGGTTTTNG
JMFF014K14+ GCTTCACATTGTTTCTTTCATGGTTCTTGAGCCCGGGAGTAATAAGGAGCTCGGTTTTCG
JMFF047N03+ GCTTCACATTGTTTCTTTCATGGTTCTTGAGCCCGGGAGTAATAAGGAGCTCGGTTTTCG
JMFF037J19+ GCTTCACATTGTTTCTTTCATGGTTCTTGAG-CCGGGAGTAATAAGGAGCTCGGTTTTCG
JMFF008H18+ GCTTCACATTGTTTCTTTCATGGTTCTTGAG-CCGGGAGTAATAAGGAGCTCGGTTTTCG
JMFF022M02+ GCTTCACATTGTTTCTTTCATGGTTCTTGAG-CCGGGAGTAATAAGGAGCTCGGTTTTCG
____________________________________________________________
consensus GCTTCACATTGTTTCTTTCATGGTTCTTGAGCCCGGGAGTAATAAGGAGCTCGGTTTTCG
. : . : . : . : . : . :
JMSF020J10+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
JMFF033C03+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
JMFF014K14+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
JMFF047N03+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
JMFF037J19+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
JMFF008H18+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
JMFF022M02+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
____________________________________________________________
consensus CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
. : . : . : . : . : . :
JMSF020J10+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
JMFF033C03+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
JMFF014K14+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
JMFF047N03+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
JMFF037J19+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
JMFF008H18+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
JMFF022M02+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
____________________________________________________________
consensus GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
. : . : . : . : . : . :
JMSF020J10+ GAGGTGAGTGGCTAAGGAC
JMFF033C03+ GAGGTGAGTGGCTAAGGACAGAGCAATCCTAGTGAGTGATAGAGA
JMFF014K14+ GAGGTGAGTGGCTAAGGACAGAGCAATCCTAGTGAGTGATAGAGACTGATTCAAATGAT
JMFF047N03+ GAGGTGAGTGGCTAAGGACAGAGCAATCTTAGTGAGTGATAGAGACTGATTCAAATGAT
JMFF037J19+ GAGGTGAGTGGCTAAGGACAGAGCAATCCTAGTGAGTGATAGAGACTGATTCAAATGAT
JMFF008H18+ GAGGTGAGTGGCTAAGGACAGAGCAATCCTAGTGAGTGATAGAGACTGATTCAAATGAT
JMFF022M02+ GAGGTGAGTGGCTAAGGACAGAGCAATCCTAGTGAGTGATAGAGACTGATTCAAATGATT
____________________________________________________________
consensus GAGGTGAGTGGCTAAGGACAGAGCAATCCTAGTGAGTGATAGAGACTGATTCAAATGATT