| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005K19 | Sequence | 467 | 008782 (8) | ref|XP_010531526.1| | 6e-85 | PREDICTED: V-type proton ATPase subunit B2 [Tarenaya hassleriana] ref|XP_0105315 | 743 | 002534 (8) | gb|AEZ00886.1| | 2e-95 | putative nucleotide-binding subunit of vacuolar, partial [Elaeis guineensis] |
| JMFF009M17 | Sequence | 619 | 008782 (8) | ref|XP_010555212.1| | 356 | PREDICTED: V-type proton ATPase subunit B2-like [Tarenaya hassleriana] ref|XP_01 | 782 | 002534 (8) | gb|AEZ00886.1| | 6e-80 | putative nucleotide-binding subunit of vacuolar, partial [Elaeis guineensis] |
| JMFF011B11 | Sequence | 536 | 008782 (8) | gb|KJB39257.1| | 3e-92 | hypothetical protein B456_007G004300 [Gossypium raimondii] | 784 | 002534 (8) | gb|AEZ00886.1| | 3e-93 | putative nucleotide-binding subunit of vacuolar, partial [Elaeis guineensis] |
| JMFF020L14 | Sequence | 498 | 008782 (8) | gb|KJB39257.1| | 1e-81 | hypothetical protein B456_007G004300 [Gossypium raimondii] | 768 | 002534 (8) | gb|AEZ00886.1| | 2e-94 | putative nucleotide-binding subunit of vacuolar, partial [Elaeis guineensis] |
| JMFF021A13 | Sequence | 472 | 008782 (8) | ref|XP_010555212.1| | 261 | PREDICTED: V-type proton ATPase subunit B2-like [Tarenaya hassleriana] ref|XP_01 | 640 | 002534 (8) | ref|XP_008377719.1| | 6e-69 | PREDICTED: V-type proton ATPase subunit B 2-like [Malus domestica] |
| JMFF047G08 | Sequence | 428 | 008782 (8) | emb|CDP14545.1| | 6e-74 | unnamed protein product [Coffea canephora] | 315 | 002534 (8) | ref|XP_008382093.1| | 4e-19 | PREDICTED: V-type proton ATPase subunit B2 [Malus domestica] ref|XP_008382094.1| |
| JMSF026E11 | Sequence | 691 | 008782 (8) | ref|XP_010531526.1| | 5e-133 | PREDICTED: V-type proton ATPase subunit B2 [Tarenaya hassleriana] ref|XP_0105315 | 766 | 002534 (8) | gb|AEZ00886.1| | 3e-95 | putative nucleotide-binding subunit of vacuolar, partial [Elaeis guineensis] |
| JMSF039B17 | Sequence | 660 | 008782 (8) | ref|XP_007036768.1| | 380 | ATPase, V1 complex, subunit B protein isoform 3 [Theobroma cacao] ref|XP_0070367 | 854 | 002534 (8) | dbj|BAD95251.1| | 7e-131 | vacuolar-type H+-ATPase subunit B2 [Arabidopsis thaliana] |
This contig is upended
. : . : . : . : . : . :
JMSF026E11+ CTCTTCAGCATCACC
____________________________________________________________
consensus CTCTTCAGCATCACC
. : . : . : . : . : . :
JMFF009M17+ ATCTGTGC
JMSF026E11+ ANGAAGATTATCAGTCTTCTCCAAACGCTTCACCAAACCAGCCTGACGACATATCTGTGC
JMSF039B17+ CTCCAAACGCTTCACCAAACCAGCCTGACGACATATCTGTGC
____________________________________________________________
consensus ANGAAGATTATCAGTCTTCTCCAAACGCTTCACCAAACCAGCCTGACGACATATCTGTGC
. : . : . : . : . : . :
JMFF009M17+ AGCAATTTCATTATGAGGAAGTCCAGCAGCAGAAAATAGAGGAATTTTCTGTCCTCTGGC
JMSF026E11+ AGCAATTTCATTATGAGGAAGTCCAGCAGCAGAAAATAGAGGAATTTTCTGTCCTCTGGC
JMSF039B17+ AGCAATTTCATTATGAGGAAGTCCAGCAGCAGAAAATAGAGGAATTTTCTGTCCTCTGGC
____________________________________________________________
consensus AGCAATTTCATTATGAGGAAGTCCAGCAGCAGAAAATAGAGGAATTTTCTGTCCTCTGGC
. : . : . : . : . : . :
JMFF011B11+ GTATCATTTCTTCTGGATAGGT
JMFF009M17+ TATTGAATTCATGACATCAATTGTTGAAATTCCTGTTTGTATCATTTCTTCTGGATAGGT
JMSF026E11+ TATTGAATTCATGACATCAATTGTTGAAATTCCTGTTTGTATCATTTCTTCTGGATAGGT
JMSF039B17+ TATTGAATTCATGACATCAATTGTTGAAATTCCTGTTTGTATCATTTCTTCTGGATAGGT
JMFF005K19+ TAGGT
____________________________________________________________
consensus TATTGAATTCATGACATCAATTGTTGAAATTCCTGTTTGTATCATTTCTTCTGGATAGGT
. : . : . : . : . : . :
JMFF011B11+ TCTCTCACTAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
JMFF020L14+ TTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
JMFF009M17+ TCTCTCACTAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
JMSF026E11+ TCTCTCACTAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
JMSF039B17+ TCTCTCACTAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
JMFF005K19+ TCTCTCACTAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
JMFF047G08+ GTAGGCCTCAGGTAGAATAGG
JMFF021A13+ TAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTGGAATAGG
____________________________________________________________
consensus TCTCTCACTAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
. : . : . : . : . : . :
JMFF011B11+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMFF020L14+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMFF009M17+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMSF026E11+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMSF039B17+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMFF005K19+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMFF047G08+ AGGACCATNGTCAATGGGTTCCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMFF021A13+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
____________________________________________________________
consensus AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
. : . : . : . : . : . :
JMFF011B11+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMFF020L14+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMFF009M17+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMSF026E11+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMSF039B17+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMFF005K19+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMFF047G08+ CACAGGAGTTTNTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMFF021A13+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
____________________________________________________________
consensus CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
. : . : . : . : . : . :
JMFF011B11+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMFF020L14+ AGAAGTTCCTTCAAAGACATGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMFF009M17+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMSF026E11+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMSF039B17+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMFF005K19+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMFF047G08+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMFF021A13+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
____________________________________________________________
consensus AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
. : . : . : . : . : . :
JMFF011B11+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMFF020L14+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMFF009M17+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMSF026E11+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMSF039B17+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMFF005K19+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMFF047G08+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMFF021A13+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
____________________________________________________________
consensus ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
. : . : . : . : . : . :
JMFF011B11+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMFF020L14+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMFF009M17+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMSF026E11+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMSF039B17+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMFF005K19+ CACTTTGTCCAGGATAACCAACGGCCTAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMFF047G08+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMFF021A13+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
____________________________________________________________
consensus CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
. : . : . : . : . : . :
JMFF011B11+ AATCTCCAGAGTTCCCTCCTCCATGCCAATAC
JMFF020L14+ AATCTCCAGAGTTCCCTCCTCCATGCCAATAC
JMFF009M17+ AATCTCCAGAGTTCCCTCCTCCATGCCAATACTGTTATCCGCCACACCCATATTATGAAA
JMSF026E11+ AATCTCCAGAGTTCCCTCCTCCATGCCAATACTGTTATCCGCCACACCCATATTATGAAA
JMSF039B17+ AATCTCCAGAGTTCCCTCCTCCATGTCAATACTGTTATCCGCCACACCCATATTATGAAA
JMFF005K19+ AATCTCCAGAGTTCCCTCCTCCATGCCAATACTGTTATCCGCCACACCCATATTATGAAA
JMFF047G08+ AATCTCCAGAGTTCCCTCCTCCATGCCAATACTGTTATCCGCCACACCCATATTATGAAA
JMFF021A13+ AATCTCCAGAGTTCCCTCCTCCATGCCAATACTGTTATCCGCCACACCCATATTATGAAA
____________________________________________________________
consensus AATCTCCAGAGTTCCCTCCTCCATGCCAATACTGTTATCCGCCACACCCATATTATGAAA
. : . : . : . : . : . :
JMFF005K19+ CTTTTCGTTTGTTCTTCTCTAATGCCAGATCGAGAGCGAG
JMFF047G08+ CTTTTCGTTTGTTCTTCTCTAATGCCAGATCGAGAGCGAAACAC
JMFF021A13+ CTTTTCGTTTGTTCTTCTCTAATGCCAGATCGAGAGCGAGACACGAAAATGAGATCCAAT
____________________________________________________________
consensus CTTTTCGTTTGTTCTTCTCTAATGCCAGATCGAGAGCGAGACACGAAAATGAGATCCAAT